BGIOSGA009181

From RiceWiki
Revision as of 18:55, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA009181

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009181, complete gene.

LocusTag

OS02G0790500

Ensembl Transcript ID

BGIOSGA009181-TA

Ensembl Protein ID

BGIOSGA009181-PA

Length

3303

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35669876..35673178

Sequence Coding Region

35669876..35671821,35672181..35672454,35672855..35673178

Genome Context

<gbrowseImage1> name=IndicaChromosome02:35669876..35673178 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:35669876..35673178 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCTTCGCTCTCCTGCCACAACCTCCTCGACCTCGTTGCCGCGGCGGACGACGCGGCGCCGTCGCCCGCGTCGCTGCGCCTCCCGCGCGTCATGTCGGCGGCGTCGCCGGCCTCGCCCACGTCGCCGTCCACGCCGGCCCCCGCGCGGAGGGTGGTCGTGTCGCACCGCCTCCCGCTCCGCGCCGCGGCCGACGCGGCGTCGCCGTTCGGGTTCTCCTTCACGGTTGACTCGGACGCCGTCGCGTACCAGCTCCGCTCGGGGCTGCCCCCCGGCGCGCCCGTCCTCCACATCGGCACGCTCCCGCCGCCCGCAACCGAGGCGGCCTCCGACGAGCTCTGCAACTACTTGCTGGCGAACTTCTCTTGCCTGCCGGTGTACTTGCCCGCCGATCTCCACCGCCGATTCTACCATGGATTCTGCAAGCACTACCTGTGGCCTCTCCTCCATTACCTTCTGCCGCTCACGCCGTCGTCGCTGGGCGGGTTGCCGTTCGACCGCGCGCTCTACCATTCTTTCCTCTCGGCGAACCGGGCCTTCGCCGACCGCCTCACCGAGGTGCTCAGCCCCGACGACGACCTCGTCTGGATCCACGATTACCACCTCCTTGCCCTCCCCACCTTCCTCCGCAAGCGATTCCCGCGCGCCAAGGTCGGTTTCTTCCTCCACTCGCCGTTCCCCTCCTCGGAGATCTTCCGCACCATTCCCGTCAGGGAGGACCTCCTCCGCGCCCTCCTCAACGCCGACCTCGTCGGCTTCCACACCTTCGACTACGCGCGCCACTTCCTCTCCGCCTGCTCGCGGCTGCTCGGCCTGGATTACCAGTCCAAGCGCGGCTACATCGGCATCGAGTACTATGGTCGCACCGTCACGGTCAAGATTCTGCCCGTCGGGATCGACATGGGCCAGCTGAGGTCGGTGGTGTCGGCGCCGGAGACGGGGGACCTGGTGCGGCGGCTCACCGAGTCGTACAAGGGGCGGCGCCTGATGGTCGGCGTCGACGACGTCGACCTGTTCAAGGGAATCGGGCTCAAGTTCCTGGCGATGGAGCAGCTGCTGGTGGAGCACCCGGAGCTGCGCGGCCGCGCGGTGCTCGTGCAGATCGCGAACCCGGCGCGCAGCGAGGGGCGCGACATCCAGGAGGTTCAGGGAGAAGCCAGGGCGATCAGCGCCCGCGTCAATGCGCGGTTCGGCACGCCGGGGTACACCCCGATCGTGCTGATCGACCGCGGTGTGTCGGTGCACGAGAAGGCGGCTTACTACGCGGCGGCCGAGTGCTGCGTGGTGAGCGCCGTGCGGGACGGCCTCAACCGGATACCCTACATCTACACGGTGTGCCGGCAGGAGAGCACTGGCCTGGATGATGCGGCCAAGCGCAGCGTCATTGTGCTGTCGGAGTTCGTCGGGTGCTCCCCGTCGCTCAGCGGCGCAATCCGGGTCAACCCATGGAGTGTGGAGTCTATGGCAGAGGCCATGAATGCAGCCCTGAGGATGCCTGAGCCAGAGCAGCGGCTGCGACATGAGAAGCACTACAAGTATGTGAGCACCCATGATGTTGCCTACTGGGCGAAATCTTTCGACCAGGACCTGCAGCGAGCTTGCAAGGATCATTTCTCGCGGCGGCATTGGGGTATTGGGTTTGGGATGAGTTTCAAGGTGGTGGCACTTGGCCCGAATTTCAGGCGGCTGTCTGTCGATCACATTGTGCCGTCATACCGGAAGTCTGATAATCGCTTAATTCTCTTGGACTATGATGGCACAGTGATGCCAGAGGGTTCAATTGATAAGGCACCGAGCAATGAGGTCATCTCTGTATTGAATCGTCTGTGCGAGGACCCCAAGAACAGAGTGTTCATCGTGAGCGGTAGAGGGAAGGATGAACTTGGCAGGTGGTTTGCACCTTGTGAGAAGCTGGGGATTGCTGCAGAGCATGGTTACTTCACAAGGTGGAGCAGGGACTCAGCTTGGGAGACCTGCGGGTTGGCCGTGGACTTTGATTGGAAGAAGACTGCAGAACCAGTGATGAGGCTTTACAAGGAGGCAACAGATGGTTCAACCATCGAAGACAAGGAAAGCGCGTTAGTTTGGCACCACGATGAGGCAGATCCAGATTTTGGTTCATGCCAGGCAAAGGAACTGCTTGACCACCTCGAAAATGTTCTTGCAAATGAACCAGTCGTTGTTAAGAGGGGCCAGCATATCGTCGAAGTAAATCCACAGGGCATCAGCAAAGGTGTGGTTGTGGACAACCTCTTGTCATCCATGGTGAGCCGAGGGAAGGCGCCCGATTTCGTGCTGTGCATTGGGGACGACCGGTCGGACGAGGACATGTTCGAGAGCATCGTTTGCCCGTCGAACAGCAGCGTCAAGCTCCCGGCGAGCAGCGAGGTGTTCGCCTGCACGGTCGGCAAGAAGCCGAGCATGGCCAAGTACTACCTCGACGACACGGTCGACGTGATCAAGATGCTGCAGGGTCTCGCCAATGCGCCATCGCAGCGGCCAAGGCAAGTGCAGCTGCGGGTCTCATTCGAAGGCTCACTGTGA</cdnaseq>

Protein Sequence

<aaseq>MPSLSCHNLLDLVAAADDAAPSPASLRLPRVMSAASPASPTSPSTPAPARRVVVSHRLPLRAAADAASPFGFSFTVDSDAVAYQLRSGLPPGAPVLHIGTLPPPATEAASDELCNYLLANFSCLPVYLPADLHRRFYHGFCKHYLWPLLHYLLPLTPSSLGGLPFDRALYHSFLSANRAFADRLTEVLSPDDDLVWIHDYHLLALPTFLRKRFPRAKVGFFLHSPFPSSEIFRTIPVREDLLRALLNADLVGFHTFDYARHFLSACSRLLGLDYQSKRGYIGIEYYGRTVTVKILPVGIDMGQLRSVVSAPETGDLVRRLTESYKGRRLMVGVDDVDLFKGIGLKFLAMEQLLVEHPELRGRAVLVQIANPARSEGRDIQEVQGEARAISARVNARFGTPGYTPIVLIDRGVSVHEKAAYYAAAECCVVSAVRDGLNRIPYIYTVCRQESTGLDDAAKRSVIVLSEFVGCSPSLSGAIRVNPWSVESMAEAMNAALRMPEPEQRLRHEKHYKYVSTHDVAYWAKSFDQDLQRACKDHFSRRHWGIGFGMSFKVVALGPNFRRLSVDHIVPSYRKSDNRLILLDYDGTVMPEGSIDKAPSNEVISVLNRLCEDPKNRVFIVSGRGKDELGRWFAPCEKLGIAAEHGYFTRWSRDSAWETCGLAVDFDWKKTAEPVMRLYKEATDGSTIEDKESALVWHHDEADPDFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVNPQGISKGVVVDNLLSSMVSRGKAPDFVLCIGDDRSDEDMFESIVCPSNSSVKLPASSEVFACTVGKKPSMAKYYLDDTVDVIKMLQGLANAPSQRPRQVQLRVSFEGSL</aaseq>

Gene Sequence

<dnaseqindica>1..1946#2306..2579#2980..3303#ATGCCTTCGCTCTCCTGCCACAACCTCCTCGACCTCGTTGCCGCGGCGGACGACGCGGCGCCGTCGCCCGCGTCGCTGCGCCTCCCGCGCGTCATGTCGGCGGCGTCGCCGGCCTCGCCCACGTCGCCGTCCACGCCGGCCCCCGCGCGGAGGGTGGTCGTGTCGCACCGCCTCCCGCTCCGCGCCGCGGCCGACGCGGCGTCGCCGTTCGGGTTCTCCTTCACGGTTGACTCGGACGCCGTCGCGTACCAGCTCCGCTCGGGGCTGCCCCCCGGCGCGCCCGTCCTCCACATCGGCACGCTCCCGCCGCCCGCAACCGAGGCGGCCTCCGACGAGCTCTGCAACTACTTGCTGGCGAACTTCTCTTGCCTGCCGGTGTACTTGCCCGCCGATCTCCACCGCCGATTCTACCATGGATTCTGCAAGCACTACCTGTGGCCTCTCCTCCATTACCTTCTGCCGCTCACGCCGTCGTCGCTGGGCGGGTTGCCGTTCGACCGCGCGCTCTACCATTCTTTCCTCTCGGCGAACCGGGCCTTCGCCGACCGCCTCACCGAGGTGCTCAGCCCCGACGACGACCTCGTCTGGATCCACGATTACCACCTCCTTGCCCTCCCCACCTTCCTCCGCAAGCGATTCCCGCGCGCCAAGGTCGGTTTCTTCCTCCACTCGCCGTTCCCCTCCTCGGAGATCTTCCGCACCATTCCCGTCAGGGAGGACCTCCTCCGCGCCCTCCTCAACGCCGACCTCGTCGGCTTCCACACCTTCGACTACGCGCGCCACTTCCTCTCCGCCTGCTCGCGGCTGCTCGGCCTGGATTACCAGTCCAAGCGCGGCTACATCGGCATCGAGTACTATGGTCGCACCGTCACGGTCAAGATTCTGCCCGTCGGGATCGACATGGGCCAGCTGAGGTCGGTGGTGTCGGCGCCGGAGACGGGGGACCTGGTGCGGCGGCTCACCGAGTCGTACAAGGGGCGGCGCCTGATGGTCGGCGTCGACGACGTCGACCTGTTCAAGGGAATCGGGCTCAAGTTCCTGGCGATGGAGCAGCTGCTGGTGGAGCACCCGGAGCTGCGCGGCCGCGCGGTGCTCGTGCAGATCGCGAACCCGGCGCGCAGCGAGGGGCGCGACATCCAGGAGGTTCAGGGAGAAGCCAGGGCGATCAGCGCCCGCGTCAATGCGCGGTTCGGCACGCCGGGGTACACCCCGATCGTGCTGATCGACCGCGGTGTGTCGGTGCACGAGAAGGCGGCTTACTACGCGGCGGCCGAGTGCTGCGTGGTGAGCGCCGTGCGGGACGGCCTCAACCGGATACCCTACATCTACACGGTGTGCCGGCAGGAGAGCACTGGCCTGGATGATGCGGCCAAGCGCAGCGTCATTGTGCTGTCGGAGTTCGTCGGGTGCTCCCCGTCGCTCAGCGGCGCAATCCGGGTCAACCCATGGAGTGTGGAGTCTATGGCAGAGGCCATGAATGCAGCCCTGAGGATGCCTGAGCCAGAGCAGCGGCTGCGACATGAGAAGCACTACAAGTATGTGAGCACCCATGATGTTGCCTACTGGGCGAAATCTTTCGACCAGGACCTGCAGCGAGCTTGCAAGGATCATTTCTCGCGGCGGCATTGGGGTATTGGGTTTGGGATGAGTTTCAAGGTGGTGGCACTTGGCCCGAATTTCAGGCGGCTGTCTGTCGATCACATTGTGCCGTCATACCGGAAGTCTGATAATCGCTTAATTCTCTTGGACTATGATGGCACAGTGATGCCAGAGGGTTCAATTGATAAGGCACCGAGCAATGAGGTCATCTCTGTATTGAATCGTCTGTGCGAGGACCCCAAGAACAGAGTGTTCATCGTGAGCGGTAGAGGGAAGGATGAACTTGGCAGGTGGTTTGCACCTTGTGAGAAGCTGGGGATTGCTGCAGAGCATGGTTACTTCACAAGGTAGTAATCTCTTATCTTCCATTCTCCTTGTTGGTACGAAGTTGCTTTGCTTGCATATTAGTAGTGTTTTTAGATTTGGATTAAATCTGTAGGATGATATAAATCATGAAACAGTACATCAACCAGTACATTTATCGAATAACATGAAGCAAAATATTGAGTTCATAAACATATCTAGATGCAGCTGTGATGTCCATTGTACTAGGATAATCTTGAGGAGGCTTTTGATTTATGCCATTAAGCTAAACATAGGTTTTAGCGTATTTATCTAGTGTCATTTTCAGTTACAAGACAGGTAGAGGAGCGTTTGAATTTGTTCTGGGAAATTTGTGATTTTTACTAATCTATGGATACCACAGGTGGAGCAGGGACTCAGCTTGGGAGACCTGCGGGTTGGCCGTGGACTTTGATTGGAAGAAGACTGCAGAACCAGTGATGAGGCTTTACAAGGAGGCAACAGATGGTTCAACCATCGAAGACAAGGAAAGCGCGTTAGTTTGGCACCACGATGAGGCAGATCCAGATTTTGGTTCATGCCAGGCAAAGGAACTGCTTGACCACCTCGAAAATGTTCTTGCAAATGAACCAGTCGTTGTTAAGAGGGGCCAGCATATCGTCGAAGTAAATCCACAGGTAAGCGCCTGCCATCTTCCTTCCTTCCTCTAGTTGTTTGACAGTATATGTTTGATTAGTTCTGGTTGTAGACTTGTATGCACAACATGTTGATCAACTAGATGTCGCTGTCAAACTAAAGGCAACGGATAAGGATTGCTCTAATCCAATCCAGTCTTCATCCACCACATACTTGGGGACAATCTATATCTGCTCGACAAATAGGATATGAATCAGCATGGACCATGTCCCGTGTGGACTGGAAAATTCGCGAAAAGAGTCCCCGGTCTTTTTAATATTTATCCCTGTTAGGAACCAACTCAATCTCAATCTCGCCACCCAAACCACCAACCTCGAAATTTCTGTAGTGATAACATACTAAAATCATCTCTCATGACAAATTATCTTTCATGTCATGCAGGGCATCAGCAAAGGTGTGGTTGTGGACAACCTCTTGTCATCCATGGTGAGCCGAGGGAAGGCGCCCGATTTCGTGCTGTGCATTGGGGACGACCGGTCGGACGAGGACATGTTCGAGAGCATCGTTTGCCCGTCGAACAGCAGCGTCAAGCTCCCGGCGAGCAGCGAGGTGTTCGCCTGCACGGTCGGCAAGAAGCCGAGCATGGCCAAGTACTACCTCGACGACACGGTCGACGTGATCAAGATGCTGCAGGGTCTCGCCAATGCGCCATCGCAGCGGCCAAGGCAAGTGCAGCTGCGGGTCTCATTCGAAGGCTCACTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009181