BGIOSGA009208

From RiceWiki
Revision as of 18:55, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA009208

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009208, complete gene.

LocusTag

OS02G0797300

Ensembl Transcript ID

BGIOSGA009208-TA

Ensembl Protein ID

BGIOSGA009208-PA

Length

4072

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36027276..36031347

Sequence Coding Region

36027276..36027323,36027404..36029572,36029677..36029742,36029946..36030418,36031251..36031347

Genome Context

<gbrowseImage1> name=IndicaChromosome02:36027276..36031347 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:36027276..36031347 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCCATCTCCCTCGAGGACGTCCGCAATGAGACCGTCGACCTCGAGACGATCCCGGTGGAGGAGGTGTTCCAGCACCTGAAATGCAGCAAGCAGGGGCTGTCGGCAGCGGAGGGACAGAACAGGCTCAACATCTTCGGGCCAAACAAGCTGGAGGAGAAGACGGAGAGCAAGCTGCTCAAGTTCTTGGGTTTCATGTGGAATCCCCTCTCCTGGGTCATGGAGGCCGCCGCCATCATGGCCATCGTCCTCGCCAACGGCGGCGGCAGGCCGCCCGACTGGCAGGACTTCGTCGGCATCGTCGTCCTCCTCGTCATCAACTCCACCATCAGTTTCATCGAGGAGAACAATGCCGGGAACGCCGCCGCGGCGCTCATGGCCGGCCTCGCGCCCAAGACCAAGGTGCTCAGGGACGGGAAATGGCAGGAGCAGGACGCGTCCATCCTCGTTCCCGGCGACATCATCAGCATCAAGCTCGGCGACATCATCCCCGCCGACGCGCGGCTGCTCGAGGGCGACCCGCTCAAGGTCGACCAGGCGGCGCTCACCGGCGAGTCGATGCCCGTCAACAAGCACGCCGGGCAGGGCGTCTTCTCCGGGTCCACCGTCAAGCAGGGCGAGATCGAGGCCGTCGTCATCGCCACCGGCGTGCACACCTTCTTCGGCAAGGCGGCGCACCTGGTGGACAGCACCAACAACATCGGCCACTTCCAGCTCGTGCTCACGGCCATCGGCAACTTCTGCATCATCTCCATCGGCGTCGGCATGATAATCGAGATCATCGTTATGTACCCGATCCAGCACCGCGCGTACCGCGACGGCATCGACAACCTGCTCGTCCTGCTCATCGGCGGCATCCCCATCGCCATGCCCACCGTGCTGTCCGTCACCATGGCCATCGGCTCCCACCGGCTGTCGCAGCAGGGCGCCATCACCAAGCGGATGACCGCCATCGAGGAGATGGCCGGCATGGACGTGCTCTGCAGCGACAAGACCGGGACGCTGACGCTCAACAAGCTCACCGTCGACAAGACGCTGATCGAGGTGTACGGGCGGGGGCTGGACAAGGACTCGGTGCTCCTGTACGCGGCGAGGGCGTCCCGCGTCGAGAACCAGGACGCCATTGACACATGCATCGTGGGCATGCTCGCCGACCCCAAGGAGGCCCGCGCCGGCATCAAGGAGGTCCACTTCCTCCCGTTCAACCCCGTCGAGAAGCGCACGGCCATCACCTACATCGACGGCAATGGCGAATGGCACAGGATCAGCAAGGGCGCGCCGGAGCAGATCATCGAGCTGTGCAAGATGAGCAAGGACGCCGAGAAGAAGGTGCACACGCTGATCGACCAGTACGCGGACCGCGGCCTCCGGTCGCTGGGCGTGTCGTACCAGAAGGTGCCGGAGAAGAGCAAGGAGAGCGAGGGCGAGCCATGGCAGTTCGTCGGCCTCCTGCCGCTGTTCGACCCGCCGAGGCACGACAGCGCGGAGACCATCCGCCGCGCGCTGCACCTCGGCGTGAACGTGAAGATGATCACCGGCGACCAGCTCGCCATCGGGAAGGAGACGGCGCGGCGGCTCGGGATGGGCACCAACATGTACCCGTCGACGACGCTGCTGGGCGACAAGAGCAGCGAGATGAGCGGCCTCCCAATCGACGAGCTGATCGAGAAGGCCGACGGCTTCGCCGGCGTGTTCCCGGAGCACAAGTACGAGATCGTGAAGCGCCTCCAGGACCGGAAGCACATCTGCGGCATGACCGGCGACGGCGTGAACGACGCGCCGGCGCTGAAGAAGGCCGACATCGGCATCGCCGTCGACGACGCCACGGACGCCGCCCGGAGCGCGTCGGACATCGTGCTCACGGAGCCGGGGCTCAGCGTCATCGTCAGCGCCGTGCTCACCTCCCGCGCCATCTTCCAGCGGATGAAGAACTACACCATCTACGCCGTCTCCATCACCATCCGCATCGTCCTCGGCTTCATGCTCGTCGCCCTCCTCTGGAAGTTCGACTTCGCCCCATTCATGGTGCTCATCATCGCCATCCTCAACGACGGCACCATCATGACAATCTCCAAGGACCGTGTCAAGCCGTCCCCGACCCCGGACTCGTGGAAGCTCAAGGAGATCTTCGCCACGGGCATCGTGCTCGGCACGTACATGGCGCTCATCACCGCCCTCTTCTTCTACCTCGCGCACGACACCGACTTCTTCACAGAGACGTTCGGGGTGAGGTCGATCAAGACGAACGAGAAGGAGATGATGGCGGCGCTGTACCTGCAGGTGAGCATAATCAGCCAGGCGCTCATCTTCGTGACGAGGTCGCGGAGCTGGTCGTTCGTGGAGAGGCCAGGGGCGCTGCTGGTGATCGCGTTCCTGGCGGCGCAGCTGGTGGCGACGTGCATCGCGGTGTACGCGGAGTGGGAGTTCTGCAAGATGCAGGGGATCGGGTGGGGGTGGGGAGGGGCGATCTGGGCGTTCAGCGTGGTGACCTACTTCCCGCTGGACGTGCTCAAGTTCATCATCCGGTACGCGCTGAGCGGGCGGGCGTGGAACAACATCAACAACAAGACGGCGTTCGTGAACAAGAACGACTACGGGAAGGGGGAGCGGGAGGCGCAGTGGGCGACGGCGCAGAGGACGCTGCACGGGCTCAACCAGTCGTCCACCAGCTCCGACCTCTTCAACGACAAGACCGGCTACCGCGAGCTCTCCGAGATCGCCGAGCAGGCCGCAAAGCGAGCCGAGGTCGCCAGACTGAGGGAGTTGCACACGCTCAAGGGGCACGTAGAGTCGGTGGTGAAGCTCAAGGGGCTCGACATCGACACAATCCAACAGAGCTACACCGTGTAA</cdnaseq>

Protein Sequence

<aaseq>MASISLEDVRNETVDLETIPVEEVFQHLKCSKQGLSAAEGQNRLNIFGPNKLEEKTESKLLKFLGFMWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGIVVLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWQEQDASILVPGDIISIKLGDIIPADARLLEGDPLKVDQAALTGESMPVNKHAGQGVFSGSTVKQGEIEAVVIATGVHTFFGKAAHLVDSTNNIGHFQLVLTAIGNFCIISIGVGMIIEIIVMYPIQHRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKTLIEVYGRGLDKDSVLLYAARASRVENQDAIDTCIVGMLADPKEARAGIKEVHFLPFNPVEKRTAITYIDGNGEWHRISKGAPEQIIELCKMSKDAEKKVHTLIDQYADRGLRSLGVSYQKVPEKSKESEGEPWQFVGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIGKETARRLGMGTNMYPSTTLLGDKSSEMSGLPIDELIEKADGFAGVFPEHKYEIVKRLQDRKHICGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLVALLWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGIVLGTYMALITALFFYLAHDTDFFTETFGVRSIKTNEKEMMAALYLQVSIISQALIFVTRSRSWSFVERPGALLVIAFLAAQLVATCIAVYAEWEFCKMQGIGWGWGGAIWAFSVVTYFPLDVLKFIIRYALSGRAWNNINNKTAFVNKNDYGKGEREAQWATAQRTLHGLNQSSTSSDLFNDKTGYRELSEIAEQAAKRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQSYTV</aaseq>

Gene Sequence

<dnaseqindica>1..48#129..2297#2402..2467#2671..3143#3976..4072#ATGGCCTCCATCTCCCTCGAGGACGTCCGCAATGAGACCGTCGACCTCGTACGTAATATATATAGTCGTGCAATCCTTCTGTGCGTTCGTTCTTAGTTTTTTTTCTTGTTTTGTTTGTTTGTTTGCAGGAGACGATCCCGGTGGAGGAGGTGTTCCAGCACCTGAAATGCAGCAAGCAGGGGCTGTCGGCAGCGGAGGGACAGAACAGGCTCAACATCTTCGGGCCAAACAAGCTGGAGGAGAAGACGGAGAGCAAGCTGCTCAAGTTCTTGGGTTTCATGTGGAATCCCCTCTCCTGGGTCATGGAGGCCGCCGCCATCATGGCCATCGTCCTCGCCAACGGCGGCGGCAGGCCGCCCGACTGGCAGGACTTCGTCGGCATCGTCGTCCTCCTCGTCATCAACTCCACCATCAGTTTCATCGAGGAGAACAATGCCGGGAACGCCGCCGCGGCGCTCATGGCCGGCCTCGCGCCCAAGACCAAGGTGCTCAGGGACGGGAAATGGCAGGAGCAGGACGCGTCCATCCTCGTTCCCGGCGACATCATCAGCATCAAGCTCGGCGACATCATCCCCGCCGACGCGCGGCTGCTCGAGGGCGACCCGCTCAAGGTCGACCAGGCGGCGCTCACCGGCGAGTCGATGCCCGTCAACAAGCACGCCGGGCAGGGCGTCTTCTCCGGGTCCACCGTCAAGCAGGGCGAGATCGAGGCCGTCGTCATCGCCACCGGCGTGCACACCTTCTTCGGCAAGGCGGCGCACCTGGTGGACAGCACCAACAACATCGGCCACTTCCAGCTCGTGCTCACGGCCATCGGCAACTTCTGCATCATCTCCATCGGCGTCGGCATGATAATCGAGATCATCGTTATGTACCCGATCCAGCACCGCGCGTACCGCGACGGCATCGACAACCTGCTCGTCCTGCTCATCGGCGGCATCCCCATCGCCATGCCCACCGTGCTGTCCGTCACCATGGCCATCGGCTCCCACCGGCTGTCGCAGCAGGGCGCCATCACCAAGCGGATGACCGCCATCGAGGAGATGGCCGGCATGGACGTGCTCTGCAGCGACAAGACCGGGACGCTGACGCTCAACAAGCTCACCGTCGACAAGACGCTGATCGAGGTGTACGGGCGGGGGCTGGACAAGGACTCGGTGCTCCTGTACGCGGCGAGGGCGTCCCGCGTCGAGAACCAGGACGCCATTGACACATGCATCGTGGGCATGCTCGCCGACCCCAAGGAGGCCCGCGCCGGCATCAAGGAGGTCCACTTCCTCCCGTTCAACCCCGTCGAGAAGCGCACGGCCATCACCTACATCGACGGCAATGGCGAATGGCACAGGATCAGCAAGGGCGCGCCGGAGCAGATCATCGAGCTGTGCAAGATGAGCAAGGACGCCGAGAAGAAGGTGCACACGCTGATCGACCAGTACGCGGACCGCGGCCTCCGGTCGCTGGGCGTGTCGTACCAGAAGGTGCCGGAGAAGAGCAAGGAGAGCGAGGGCGAGCCATGGCAGTTCGTCGGCCTCCTGCCGCTGTTCGACCCGCCGAGGCACGACAGCGCGGAGACCATCCGCCGCGCGCTGCACCTCGGCGTGAACGTGAAGATGATCACCGGCGACCAGCTCGCCATCGGGAAGGAGACGGCGCGGCGGCTCGGGATGGGCACCAACATGTACCCGTCGACGACGCTGCTGGGCGACAAGAGCAGCGAGATGAGCGGCCTCCCAATCGACGAGCTGATCGAGAAGGCCGACGGCTTCGCCGGCGTGTTCCCGGAGCACAAGTACGAGATCGTGAAGCGCCTCCAGGACCGGAAGCACATCTGCGGCATGACCGGCGACGGCGTGAACGACGCGCCGGCGCTGAAGAAGGCCGACATCGGCATCGCCGTCGACGACGCCACGGACGCCGCCCGGAGCGCGTCGGACATCGTGCTCACGGAGCCGGGGCTCAGCGTCATCGTCAGCGCCGTGCTCACCTCCCGCGCCATCTTCCAGCGGATGAAGAACTACACCATCTACGCCGTCTCCATCACCATCCGCATCGTCCTCGGCTTCATGCTCGTCGCCCTCCTCTGGAAGTTCGACTTCGCCCCATTCATGGTGCTCATCATCGCCATCCTCAACGACGGCACCATCATGACAATCTCCAAGGACCGTGTCAAGCCGTCCCCGACCCCGGACTCGTGGAAGCTCAAGGAGATCTTCGCCACGGGCATCGTGCTCGGCACGTACATGGCGCTCATCACCGCCCTCTTCTTCTACCTCGCGCACGACACCGACTTCTTCACAGTATTACAAAACACATAGTACATTTTATACGTTCTCTTAGAGCAGAGCCTATTTGATTCCTTTGTATCCTCCTATTATAAAATGACTGGAAAAAAAAAACGCAGGAGACGTTCGGGGTGAGGTCGATCAAGACGAACGAGAAGGAGATGATGGCGGCGCTGTACCTGCAGGTGAGCATAATCACCTGGGAGAGTGGTGGGCTCTGCCCCCTTCCCGCTGTTTGGAGTCGTAGTATCCGAGTCTTTTTTTTCCTTGGTTTTTTGTTTCCCTCCTCTCTTGATATAAGTCGGTCTGGTTTAGTGCGTTAAGTAACATATATTCTTTTATTCTGATATATTGACGTGCAATCTTTTTACGTTTTCGAGAAACAAAGGTGAGCATAATCAGCCAGGCGCTCATCTTCGTGACGAGGTCGCGGAGCTGGTCGTTCGTGGAGAGGCCAGGGGCGCTGCTGGTGATCGCGTTCCTGGCGGCGCAGCTGGTGGCGACGTGCATCGCGGTGTACGCGGAGTGGGAGTTCTGCAAGATGCAGGGGATCGGGTGGGGGTGGGGAGGGGCGATCTGGGCGTTCAGCGTGGTGACCTACTTCCCGCTGGACGTGCTCAAGTTCATCATCCGGTACGCGCTGAGCGGGCGGGCGTGGAACAACATCAACAACAAGACGGCGTTCGTGAACAAGAACGACTACGGGAAGGGGGAGCGGGAGGCGCAGTGGGCGACGGCGCAGAGGACGCTGCACGGGCTCAACCAGTCGTCCACCAGCTCCGACCTCTTCAACGACAAGACCGGCTACCGCGAGCTCTCCGAGATCGCCGAGCAGGCCGCAAAGCGAGCCGAGGTCGCCAGGTAAAAACTTACTCCATCCCATAATATATAATAATGGCAACATATCCTATACACACAGGCCCTCACGTGTACACACGTTCACACCAACTAAAAAATGTCACCAAAAAATCTAGAAAAAATCATACACATACTTTCAATTGTATTACACCTAGGGTTAAAATCTTAACGTCAAATTCATTATATTTTAGCCGTAACAAAAAAAACAAAAAATCTGACAGTTTTAAGGTTGCAATTTTGTTAGAATTTTTATCTTTTTTTGTTATTCTCTATGTAGAATGAATTTGAAGATGCGACTTTGCACGTAGATGTAATACTATTGAAAGTACATGTATGAATTTTCCTAAAATTTTTTGTGATAATTTTTAGTTGGTGTACACGGTGTGTACACGCGAGGGTCTGTGTGCATAGGATACGCTCCCTATAATAATACAGTACTCCCTATGTATTTTAATGTATGACTCCCTTAACTTTTTTATCAACGTTTGATCATTTGTCTTATTTAAAATATTTATGTAATTATCATTTATTTTATTGTGACTTGATTTATCATCAAATAATCTTTAAGGCATGACATAAATATTTTTATATTTGGACAGAAAATTTGAATAAGACGAATGGACAAACGTTTGTTTGAAAAATTAACAGCATTATACATTGAAATATAGAGGTAGTACGTAGATAAGACATTATCTAGATTATTACTAGTAGAATGTCTTGTCCGGTACTACGCTTCTATATTACGGGACCGATGTAGTACATTCTCCGTACTGCAACCAACCAATGTTCAACTTTCTAGCTAGCACACTGCTTGATTTCTCATCTCCATGTACAGACTGAGGGAGTTGCACACGCTCAAGGGGCACGTAGAGTCGGTGGTGAAGCTCAAGGGGCTCGACATCGACACAATCCAACAGAGCTACACCGTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009208