BGIOSGA009226

From RiceWiki
Revision as of 18:55, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA009226

Description

HeparanasePutative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009226, complete gene.

LocusTag

OSJNBA0032L17.36

Ensembl Transcript ID

BGIOSGA009226-TA

Ensembl Protein ID

BGIOSGA009226-PA

Length

3743

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36238737..36242479

Sequence Coding Region

36238737..36238982,36239669..36239705,36239976..36240159,36240251..36240399,36240797..36241030
,36241118..36241307,36241389..36241514,36241911..36242010,36242120..36242479

Genome Context

<gbrowseImage1> name=IndicaChromosome02:36238737..36242479 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:36238737..36242479 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGGGCTACTGCTGAAGCTGGTCGGGTTCTGCTTCTGGGCCGTCTTCTGGCTCGGCGGCGCCGCCACCGTCAGCACCAACGCCGGCGGCGAGGCGGCGGCGGCGGCGGTGGTGGTGGACGCGCGGTCCGCCATTGCTGTGACGGACGAGGACTTCGTGTGCGCGACGCTGGATTGGTGGCCGCCGGACAAGTGCGACTACGGCACCTGCAGCTGGGGACTCGCCACCCTCCTCAACATGGATCTTTCAAACAAAATCCTGTTGAATGCCGTCAAAGCATTCTCACCTCTGAAGCTTAGGCTGGGAGGATCCTTGCAGGATGTGTTGATATACGACACCGGCGATCCTCGGCAGCCGTGCACTCCGTTCACGAAGAACTCATCGGCCATGTTCGGTTTCACTCAAGGTTGCCTGCCGTTGCATAGATGGGACGAGCTCAATGCATTCTTCCAAAAATCAGGAGCAAAAATTATCTTTGGGCTGAATGCTCTGAATGGTAGGGTTCCAATGTCTGATGATTCTTTAGGAGGGCCATGGAATTACACCAATGCGGCTTCCTTCATTCGCTACACTGTCAGCAAGGGCTATGACATCCATGGATGGGAACTCGGAAATGAACTCAGTGGCAGTGGAGTTGGAGCTCGAGTTGATGCAGACCAATATGCACAAGATGTTCTAGCTCTGAAACAAATCATTGACAACTCCTACCAAGGCCATGCATCAAAGCCACTGGTGATCGCACCGGGAGGTTTCTTTGATGCAGCCTGGTTCACTGAGCTTATCAGCAGAACAAAGCCAAACCAGATGGATGTGATGACTCACCACATCTACAATCTAGGCCCTGGCGTCGACACGCACCTGATTGATAAAATTCTTGACCCGTCTTACCTCGACGGCGAGGCCGGCACATTCAGCAGTCTCCAGGGGATACTGAAGTCTGCAGGGACGTCCACCGTCGCGTGGGTCGGCGAGGCTGGAGGCGCTTACAACAGTGGTCACCACCTTGTAACTGATGCTTTTGTGTTCAGCTTCTGGTACTTGGATCAGCTAGGAATGTCATCTAAGTATGACACAAAGACCTACTGCAGACAGACCTTGATTGGAGGGAACTATGGTCTGCTCAACACAACAACGTTTGAACCAAACCCTGATTACTACAGTGCTTTACTATGGAACCGCCTCATGGGAACCAAGGTTCTCTCGGCAACATTCAACGGCACTAACAAGATCCGCGCTTACGCACATTGCGCAAGAGATTCACGTGGGATCACTCTACTCCTGATCAACCTCAGTGGCAACAACACAAACCATATCTACATGACGAGCGAAGGCGTGCAACCTTACAGCACAAAGAAGGAGGGCCGCAGAAGGTTCGGACGCATCCCCGGGCTCGGCGAAGAAGCTCAGCTCATCAGAGAAGAGTACCATCTCACCCCCAAAGATGGGAGCCTGCAGAGCCAGCATGTGCTGCTGAATGGCAATGTGTTGGCACCTGATGCCAATGGAGAGATCCCTAAGCTGGAGCCTGTGCAGGTGGAGGGAACACAGCCCATAACAGTGGCTCCTTACTCCATTGTGTTTGCTCATATTCCCAGATTCTATGCTCCTGCCTGTAGGTAG</cdnaseq>

Protein Sequence

<aaseq>MAAGLLLKLVGFCFWAVFWLGGAATVSTNAGGEAAAAAVVVDARSAIAVTDEDFVCATLDWWPPDKCDYGTCSWGLATLLNMDLSNKILLNAVKAFSPLKLRLGGSLQDVLIYDTGDPRQPCTPFTKNSSAMFGFTQGCLPLHRWDELNAFFQKSGAKIIFGLNALNGRVPMSDDSLGGPWNYTNAASFIRYTVSKGYDIHGWELGNELSGSGVGARVDADQYAQDVLALKQIIDNSYQGHASKPLVIAPGGFFDAAWFTELISRTKPNQMDVMTHHIYNLGPGVDTHLIDKILDPSYLDGEAGTFSSLQGILKSAGTSTVAWVGEAGGAYNSGHHLVTDAFVFSFWYLDQLGMSSKYDTKTYCRQTLIGGNYGLLNTTTFEPNPDYYSALLWNRLMGTKVLSATFNGTNKIRAYAHCARDSRGITLLLINLSGNNTNHIYMTSEGVQPYSTKKEGRRRFGRIPGLGEEAQLIREEYHLTPKDGSLQSQHVLLNGNVLAPDANGEIPKLEPVQVEGTQPITVAPYSIVFAHIPRFYAPACR</aaseq>

Gene Sequence

<dnaseqindica>1..246#933..969#1240..1423#1515..1663#2061..2294#2382..2571#2653..2778#3175..3274#3384..3743#ATGGCGGCGGGGCTACTGCTGAAGCTGGTCGGGTTCTGCTTCTGGGCCGTCTTCTGGCTCGGCGGCGCCGCCACCGTCAGCACCAACGCCGGCGGCGAGGCGGCGGCGGCGGCGGTGGTGGTGGACGCGCGGTCCGCCATTGCTGTGACGGACGAGGACTTCGTGTGCGCGACGCTGGATTGGTGGCCGCCGGACAAGTGCGACTACGGCACCTGCAGCTGGGGACTCGCCACCCTCCTCAACATGGTCTGTGTTTTTCTTTCTTTTCTTTTCTTTTTTTTTCCTTTCCCATTTCATGTTAAGTTGTTTGGAAAGTTTTTCAAATTTGAGTTCCAGAATTGACAGTAAATTTAGTAGTTTAGTATATCATCTCGTTGCAATGCGATTCCGTAGAACATGGACGTGGTTTTCAAGGATGTTTCTTGTGCAAATGCATTTCTTTCTCTCTTTTTTTTTATGTAGTCGGCAACGGTTTGGTTTGGATCTTTTTGGGAGCTGTGTTGGATAGGAATTTGACGGCCTAGGGAGTTTCATGGACCTATAATTTTGTCGGTCCATTTGCATTTCCATTTGCATCACAACCTTTTCCTACCAAATCATGTGCAAATGTAAAGCCTACTACCTTAAAGAATGTTTGGGTCAGGTTTTTATGAAAAGAGGTACACAGTGGTAGGAAAGGTAGCAACAGTAGTTTATTTTGTTGCGTGCCTCTTCAACTCAACTGTGATTTTTTTTTAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAGAAGCAAGAACTCAACTGTGCTAGCTTGGAAGTTGGGATTCTTTGGTTGCTACCTTGCAAAAGTGTACAATAATTATGGTCATGAGCACGGGTGATTATCTGATTGACACAGGTCTTTAATGATTATCTGATTGACACAGGTCTTTAATGTTTTCCTCCGCAGGATCTTTCAAACAAAATCCTGTTGAATGCCGTCAAAGGTAAGCTACTACATGGTCATCACTTTCAGTTGCATGAATGCTGTCTTACTGTCCAATCAAAAGAAGAAGAAAATTTTTTAGGTCCATGTCATGCTTCAAGAATCTTTCAGAATAAAAATTAAACATGAGACAAGCAAGCTCAAGAAGTTGACCGGCAAAACGATTTCCTGTCTTTGCTGGGAATATTTCAGAGCCGTCCATTTTCAATCTGACAACGGTAATTCGCAGTTGGTACAATGGTCAAGTGACTGCAGCTAATTCATTTTGCAGCATTCTCACCTCTGAAGCTTAGGCTGGGAGGATCCTTGCAGGATGTGTTGATATACGACACCGGCGATCCTCGGCAGCCGTGCACTCCGTTCACGAAGAACTCATCGGCCATGTTCGGTTTCACTCAAGGTTGCCTGCCGTTGCATAGATGGGACGAGCTCAATGCATTCTTCCAAAAATCAGGGTACTTCCAGTGTATTCAGCTCGATTCAGCCTCAAAAAAGCAATGTTTTGTTTGGACTTTTGATTACTGATTGGATACTTTATGGATGCAGAGCAAAAATTATCTTTGGGCTGAATGCTCTGAATGGTAGGGTTCCAATGTCTGATGATTCTTTAGGAGGGCCATGGAATTACACCAATGCGGCTTCCTTCATTCGCTACACTGTCAGCAAGGGCTATGACATCCATGGATGGGAACTCGGTATGTTTGTTTTTGTGAGCTATCTTAGTTTAAAGAAGTTCTCTCTCTTTTGCAATGGTATTATTCTCAAGCTACTTTAGGTTAGGAAAAGAAATCTGATAGGTTGGCAGGAATGAGTCCAGACAAGTATGTCGACATCGATTTAGATAGTGTTGAGCTATCTATTAGTATAACGATCATAGATGATGCTTTTACTGGCTTTTCACGCGTCAATCTACAAAAGGGAATACTTTCATGTCATGTTCTTTGCTTTCCAAAGTTTTGCTTAAAGAGCAATTTATATCTGAACAATACTTTTGTACTAGCATTCTAGGAACTCAAACATACAGTCCTTGTTTTTTTTTAAAAAAAAAAAAGGGAATCCTTTTGTCTAAAAGAAAACATACTGTCCTTGTAGGAAATGAACTCAGTGGCAGTGGAGTTGGAGCTCGAGTTGATGCAGACCAATATGCACAAGATGTTCTAGCTCTGAAACAAATCATTGACAACTCCTACCAAGGCCATGCATCAAAGCCACTGGTGATCGCACCGGGAGGTTTCTTTGATGCAGCCTGGTTCACTGAGCTTATCAGCAGAACAAAGCCAAACCAGATGGATGTGATGACTCACCACATCTACAATCTAGGCCCTGGTATGATCCCTGTCACTGACCGTGAATTCAGTACATGAGCTCAAAGCTTCGAATCTGCCTAAATGGACAAAATTCTGAATATTTCAGGCGTCGACACGCACCTGATTGATAAAATTCTTGACCCGTCTTACCTCGACGGCGAGGCCGGCACATTCAGCAGTCTCCAGGGGATACTGAAGTCTGCAGGGACGTCCACCGTCGCGTGGGTCGGCGAGGCTGGAGGCGCTTACAACAGTGGTCACCACCTTGTAACTGATGCTTTTGTGTTCAGCTTCTGGTAAAGATTTTGGAGCATCATTTTCTTCTCAAGTTATCCTCTGAAGAAGCCATTACTGATTAGGCTTTAACAATTTTTCAGGTACTTGGATCAGCTAGGAATGTCATCTAAGTATGACACAAAGACCTACTGCAGACAGACCTTGATTGGAGGGAACTATGGTCTGCTCAACACAACAACGTTTGAACCAAACCCTGATTACTACAGGTAAATACATCTGCATGTCTATTTTTTTTTCTTGGAAAGGTTTTACCTAATGTGGAAGTACTTCATTGGAACATAGTTGTCCTACGCTGGATCATAAATAACAATACTTAATCATCCATGATGATGAACTGGCACCATAAACTTATTAGAATTAATGGGGGCATATGCCCTACATGTGCAGAATATATTCCAGCTATTAGAATCTTTTCTTTCCGGGAACAACCAATTATAAGAGTCTGACAGCACATACCTAATATAACCAAGCTAAAGATTGGTTCCACTGCATTCAATCTTATAGCAAAGCTAAAAAGATCGTTTCCACTGCATTCAATCTTATAGAGTGAAACAGTGTACCAAGGTCACCATCTTCATCCAACTTTTCTGGCTCTCTTTCAGTGCTTTACTATGGAACCGCCTCATGGGAACCAAGGTTCTCTCGGCAACATTCAACGGCACTAACAAGATCCGCGCTTACGCACATTGCGCAAGAGATTCAGTAAGTAGTATAACATGCAATTCAAACAAACAAAGGAGATCCCCTTTATCCGTCTGTGACGAAGTGTATCAGCTAACTGAACACTACCAAATTTCCTCTGAATTTTCAGCGTGGGATCACTCTACTCCTGATCAACCTCAGTGGCAACAACACAAACCATATCTACATGACGAGCGAAGGCGTGCAACCTTACAGCACAAAGAAGGAGGGCCGCAGAAGGTTCGGACGCATCCCCGGGCTCGGCGAAGAAGCTCAGCTCATCAGAGAAGAGTACCATCTCACCCCCAAAGATGGGAGCCTGCAGAGCCAGCATGTGCTGCTGAATGGCAATGTGTTGGCACCTGATGCCAATGGAGAGATCCCTAAGCTGGAGCCTGTGCAGGTGGAGGGAACACAGCCCATAACAGTGGCTCCTTACTCCATTGTGTTTGCTCATATTCCCAGATTCTATGCTCCTGCCTGTAGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009226