Os07g0192800

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Revision as of 08:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0192800| Description = AAA ATPase domain containing protein| Version = NM_001065637.2 GI:297606855 GeneID:4342631| Length = 7553 bp| Defin...")
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Gene Name

Os07g0192800

Description

AAA ATPase domain containing protein

Version

NM_001065637.2 GI:297606855 GeneID:4342631

Length

7553 bp

Definition

Oryza sativa Japonica Group Os07g0192800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:5037712..5045264

Sequence Coding Region

5037712..5037816,5039882..5039948,5041746..5043353,5045068..5045264

Expression

GEO Profiles:Os07g0192800

Genome Context

<gbrowseImage1> name=NC_008400:5037712..5045264 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:5037712..5045264 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggtgggaggaggagggcggcggccgtcgagctaccaggatgacagccatcgcgccacagtgggatccggtggggacgagggggacaccgacgccgacgccgacgaggaggagaggatcccgtcaggaggagcagacttgggcgaatggtatacggtgcaaaagcggtggaggtggcggtggagtaggggaagctgggaccaccactgggcccacatcctgacagctccgagtactacaagttcacacagggtcagtcacacagttaacgcacttggcagcaaggtcaggcgaggcgagcttgcaatgccggcggcgaggaggatgaggcgcgcggcggcggcggcgggggtggtggagagattcgccgggatggggtcggcgctcgccggcgtgatgttcgtgtggagcatgctgagcccgctcctgccgcggcagctgttcgagcacttcgtcggccgcttcctccggcggcacgcgcggcggctcgccgggctcgtggacccctacctcaccgtcaccatcagcgagcactgcggcgagaggatgaagctcggggacgtctacgagcaggccaaggcgtacctcagccaccggtgcgcgcgccgggcgcggtcgctgcgcgcggagcgcgccgcccgcgacggcggcggcgacaggttcctgctcaccatgggcgacggcgaggaggtctacgacgtgttccagggcgccaccgtgtggtggaactccgtctcctccggcggcgggcggcgctacgagtctccctggttcggcggcggcggcgtcgtctacgacgacgaccgccgcgcgtaccggctcctgttccaccggcgccaccgcgacctcgtcgtcgactcctacctcccgcacgtctgccgcgagggccgcgccatcatgctccgcaaccgccgccgcaagctgttcaccaacgccggcggcgaccggtacaggaagtcggcgtggagctacgtggcgttcgagcacccgtcgacgttcgacacgctcgccatggacccggccaagaagaaggacatcatggacgacctcgacgcgttccgggacgggaaggactactacgcccgcatcggcaaggcgtggaagcgcggctacctcctgcacggcccgcccggcaccggcaagtccaccatgatcgccgccatggccaactacctcgactacgacatctacgacgtcgagctcacgtccgtggccaccaacaccgacctccgccgcctcttcatcgagaccaagggcaagtccatcatcgtcatcgaggacatcgactgctccgtcgacctcaccggcaagcgcaagaagaggtctcctcacgccgccgccgccgccgccgagcccgtcgacgccgccaaggacgagagcgcgagcaaggtgacgctctccggcctcctcaacgtcatcgacgggctctggtcggcgtgcggcggcgagcgcatcgtcgtgttcaccaccaaccacgtcggcaagctggacccggcgctgatccggcgaggccgcatggacaagcacatcgagatgtcatactgctgcttcgagacgttcaagatcctggccaagaactacctcgccatcgacgcccaccacctgttcgacgacgtgcgatcgctcctccaggacgccaggatcaagatcaccccggccgacgtcgccgagcacctgatgcgcaagtgcgccacagccgccgccgacgaggctgccgcctgcctcgccagcttggtgaaggcgctggagaagaaggccaaggggaaggagacagtggaggaggaggagacagtggtggatgagagatgctgtcctttgaagagcagtatggttgggatcaagttcaggccttcaatctccctctcaaatgaaatgaaccaaacaccagctacatttaaatttcgtttcgaagttcgaacagctacacatcagtcagtgcaacagtatcagttttcgcagagaattgaccgttga</cdnaseq>

Protein Sequence

<aaseq>MVVGGGGRRPSSYQDDSHRATVGSGGDEGDTDADADEEERIPSG GADLGEWYTVQKRWRWRWSRGSWDHHWAHILTAPSTTSSHRVSHTVNALGSKVRRGEL AMPAARRMRRAAAAAGVVERFAGMGSALAGVMFVWSMLSPLLPRQLFEHFVGRFLRRH ARRLAGLVDPYLTVTISEHCGERMKLGDVYEQAKAYLSHRCARRARSLRAERAARDGG GDRFLLTMGDGEEVYDVFQGATVWWNSVSSGGGRRYESPWFGGGGVVYDDDRRAYRLL FHRRHRDLVVDSYLPHVCREGRAIMLRNRRRKLFTNAGGDRYRKSAWSYVAFEHPSTF DTLAMDPAKKKDIMDDLDAFRDGKDYYARIGKAWKRGYLLHGPPGTGKSTMIAAMANY LDYDIYDVELTSVATNTDLRRLFIETKGKSIIVIEDIDCSVDLTGKRKKRSPHAAAAA AEPVDAAKDESASKVTLSGLLNVIDGLWSACGGERIVVFTTNHVGKLDPALIRRGRMD KHIEMSYCCFETFKILAKNYLAIDAHHLFDDVRSLLQDARIKITPADVAEHLMRKCAT AAADEAAACLASLVKALEKKAKGKETVEEEETVVDERCCPLKSSMVGIKFRPSISLSN EMNQTPATFKFRFEVRTATHQSVQQYQFSQRIDR</aaseq>

Gene Sequence

<dnaseqindica>7449..7553#5317..5383#1912..3519#1..197#atggtggtgggaggaggagggcggcggccgtcgagctaccaggatgacagccatcgcgccacagtgggatccggtggggacgagggggacaccgacgccgacgccgacgaggaggagaggatcccgtcaggaggagcagacttgggcgaatggtatacggtgcaaaagcggtggaggtggcggtggagtaggggaaggtgcgggcaagcgtggcggcatttaccctacggggcgggagaggttgagcttggactcgtctctactgcgcttcttgcagcggcggtttctggcgtcaacggcatcatcgtctgagtctgaatcgtaaacagtgttctagagaaatagatgttatctagattctgtcatcaaatactccagctttatgtgatttggtatggatatctaagatcaattaagtttagatggagagtttgctcgttctgtgatagggcaatttcatgacatttcaatatcgtccatggcagcttcgcccattgatgtgggcaggagaggttccctgccctctcagccactctagagcgttgtaaatgctctgacttgaagaagcttttcagaagaaaagggggttgatctgaagaggactgaacgagtcgaagtggtagagctgctttcttctgaacaattttgttcttgttctctttttgggtgaagccaacccaagctaagctagctgccgcctacacaagccaacgctaccatgggcaaccggatagcctgatgaacagataatagagacaaagggcatgtttagatcccacaaatttttttaccatatcacatcgaatgtttggatacatgcatagaatattaattatagacaaaaaaaaaagaaagaaaaactaattacacaaattacatgtaaattgcgagacgaatcttttaatcctaattgctccatgatctgataatgtggcgctacagtaaatatttgctaatggtggattaattatgcttaataaattcatctcgcagtttacagacggaattattagtctatctatgtttaatacttcaaatgtgtgtccgtatatccaatgtgagatatgttagaacttttcatccctagatctaaccacagccaaacatgctgcaaagttcagttcgatcgactggctgagctgtgatggatgcacacaagagcagagattccttgcagcatttcacagacttgatgatctgaaatttcaggcataaatattgtcctttatttactggatgccattaacttttcaacgaatccttgaagatgctaatggcaatgtggcatagcaaggcttaggtaaaatcattgtcacaactcacgactcaagcaaatttaagagaattttaacatactttttttttgaataattgaggtatgtgatttaattcgttggaagggaattatgctacaactgcatctgcaaacaaatgaaagcttatatggattaaacttatctaatcttagatgtggcaaaaccgtgacgaagtatggccataccaaatggtctgggatctttacacctctacatatcctatccaagacatattttaaaaatagaaaatggcttgtttgaacctgaaaaaaaggtagtaccagtttaaacaaactggaataaatcccagaatctttgttctaaagaacaaaaaaacagccaccatgctaccatgaatcttgctctaaacaacaaaaaatagctgcccagtacaaaatctttgtgagggctgtttctcaatcccatggaacaatggggatatgatcaaggacaataatcctctgtctccaacaacatgccagtgactcatgattatcagtacacacaagaatcaaaattatcttgtcagaacaaaaaaaatcttaagtacagactagtacagaagaaaagcctctcttcttcatcacactgacagctgggaccaccactgggcccacatcctgacagctccgagtactacaagttcacacagggtcagtcacacagttaacgcacttggcagcaaggtcaggcgaggcgagcttgcaatgccggcggcgaggaggatgaggcgcgcggcggcggcggcgggggtggtggagagattcgccgggatggggtcggcgctcgccggcgtgatgttcgtgtggagcatgctgagcccgctcctgccgcggcagctgttcgagcacttcgtcggccgcttcctccggcggcacgcgcggcggctcgccgggctcgtggacccctacctcaccgtcaccatcagcgagcactgcggcgagaggatgaagctcggggacgtctacgagcaggccaaggcgtacctcagccaccggtgcgcgcgccgggcgcggtcgctgcgcgcggagcgcgccgcccgcgacggcggcggcgacaggttcctgctcaccatgggcgacggcgaggaggtctacgacgtgttccagggcgccaccgtgtggtggaactccgtctcctccggcggcgggcggcgctacgagtctccctggttcggcggcggcggcgtcgtctacgacgacgaccgccgcgcgtaccggctcctgttccaccggcgccaccgcgacctcgtcgtcgactcctacctcccgcacgtctgccgcgagggccgcgccatcatgctccgcaaccgccgccgcaagctgttcaccaacgccggcggcgaccggtacaggaagtcggcgtggagctacgtggcgttcgagcacccgtcgacgttcgacacgctcgccatggacccggccaagaagaaggacatcatggacgacctcgacgcgttccgggacgggaaggactactacgcccgcatcggcaaggcgtggaagcgcggctacctcctgcacggcccgcccggcaccggcaagtccaccatgatcgccgccatggccaactacctcgactacgacatctacgacgtcgagctcacgtccgtggccaccaacaccgacctccgccgcctcttcatcgagaccaagggcaagtccatcatcgtcatcgaggacatcgactgctccgtcgacctcaccggcaagcgcaagaagaggtctcctcacgccgccgccgccgccgccgagcccgtcgacgccgccaaggacgagagcgcgagcaaggtgacgctctccggcctcctcaacgtcatcgacgggctctggtcggcgtgcggcggcgagcgcatcgtcgtgttcaccaccaaccacgtcggcaagctggacccggcgctgatccggcgaggccgcatggacaagcacatcgagatgtcatactgctgcttcgagacgttcaagatcctggccaagaactacctcgccatcgacgcccaccacctgttcgacgacgtgcgatcgctcctccaggacgccaggatcaagatcaccccggccgacgtcgccgagcacctgatgcgcaagtgcgccacagccgccgccgacgaggctgccgcctgcctcgccagcttggtgaaggcgctggagaagaaggccaaggggaaggagacagtggaggaggaggagacagtggtggatgagtagcttagcttaactgcagaattatcaggttaattaataacaaatttagctctatcatctgcatcaagaaagtagaattgtgttcagctctgctgttagtttgctaccaacttaggagatgattagttgttaatcttgttatgattacaatgcatcacaagattaacaatgaactgatgttgttgtcaactcaattcgaatggattggaatattggatgatcacagcctcacaggttgtgtttgaggctgaaaatttgactgcttgatgcacccagctttcaaggaaagtacggtttcaagcagagtttgaaaagcaaaagctgctgctttcttgtcaggctgatgcaacacaaaacgaatctaggagtaccatactgcggataaggattgggatttgggaatgcccttggtacatttatagcaatgaaatggcattgagtaattcttgacatgaagagaaccatggccacttccttttttaaaaaaaaataaaaatatactagacaatcacaaggaacttaggccccgtttgttattcaactacaaacattaacttctttattttccgttaacacatttttaaaatgttaattgatgagtttttttaaaaagaaaatctatatagaagttgttttttaaatcaaataaatctatttttcaagtttataatagctagcgctatgttaacatgtgctaatgagttttctcgtttcacgtgcactgaaaatctttcagccccatcggatggcctattcagccaaagaaaaagccaaaatttaaattttcaaacttaattttgacattgattttgagatattttcaacgtaatttctttttcagcattggctttttaagtcaccgagaacacatctataaaagttttacctacaaatttatttttattctctaataagccgttttggcttattacgaaaaaagccaaacaatgatgctctttctcaaaacactggtaacggacataccctagtgtcgaataattaagaaaaatatgtgaggttattaagaatcaaacatgagatctcggggacttgggttaaaaccacacactcctaccattacactagcaaatgcaactcctcgtaatactttcggtgttggtaggcaataattgatcattgccaaaaatttttggcaaaaaccggctagacctttatttggttctatactaaagttgcattttggcattgaactatgccaaataattagacaatggtaatattttagctaaaaccaagtagatgactattttttgtcatcagcatttttttttgccttggtttagtttggttatgaaataaacatagtgttttttcttgccaatttatagtacctcttagtaacttcatgactatcgcaaattatcactcaaaatttttggtacttctcacatctcttatcgctaattagtccatgattagtcataagtgctacagtaacccacatgtgcaaatgacggattaattaggctcaaaagcttcgtctcgcagtttccaggcgagttatgaaattagttttttcattcgtgtccgaaaaccccttccgacatccggtcaaacgtccgatgtgacacccaaaaattttcttttcgcgaactaaacaggccctgagcctttgcattgcatctggatttgtgtcttggcacatctccatgacaaggtctagggtcaaagatccatccaggcccatcttaaattggaggaaggggtgacaatgtgcaagcatgcattgcatgtgattgtttgcaagttccttttcttttcctgtttttctgcaggagatgctgtcctttgaagagcagtatggttgggatcaagttcaggccttcaatctccctctcaaatgtatgatgtctggactatgacaattcggtttcaactggaatccaggggaaataaaaccgcatgctataggccctgtttagttccaaagttttttttttccaaacttccaacttttcatcacatcaaacctttcatacacacgcaacttttctatcacatcgtaccaatttcaaccaaactttcaaacttcggtgtgaactaaacacgaccaaacgtaaagtatttgaaacttgtccaatcaagccataacctgaaacagaagggggcagcttggaacttaggagtttcacgagaaatagttcaatcgtcgcataatctaggaaaatttacattgtttcaaataaggaagaaaccaccgctgaatcatacacatctgaatagaagcactcctatacaaaatttgttcaaggcttgtttggttcaatacactaccaaaatattggtagtgccaaaatctagacaaactttggcactacaaattctttggcagggtaaagtagcatttggttttatgccaataagaaatcgaaaccttgattataatctagaaagtaccaagttagacattggcaatgccaataatttgacttcaaaccaaaaccaactgacatgtctactatttaagctaccaaaatattggtagggtatattttgacttcaatccaaaaggccctcagtttcttcaataccttcagcttagatgctgacaccagtcaattggacatcttgacaagaatcttttcaccaatctcatgtcaattctggaaaacctaactgaaaatttgaagtccatgatgcagatttcctttttatcattgaattcttcactttccaatttcttgttagttctccgtttgtttcggttttcaggattttttacatttctggcaacgtatttgtcaatctgccgatatgcttttacaactaccggccaaattaccttttacaacttcacatccttgttgctctgtcatgcatgataaagacataaagtagactggaaattaatttcttcgttaaggactaaagtgttgtacgctgaagaagaacctgtagattaagttgcgtttcaccggtattagatgtccttacaatgggcagttgatagctgtcggtagaaaaatggaatgtatcacatcattgtaaaagtatcgtacaaagaattacaggatacggtgggtagaaatttgatgtttttgcccaattgtattttgtttttcatgctccgaatttcgatatcttgttcttccatttgaattttgccttttccactttaagttctgatatttctccttcccacttgaaatttatttttgcacaaggaaattggtcctcacctaaacggcctaaatggcaaaaataacttcgaaataataaaatattttcccttataaaaaatgcaaaatcttcataatttatatcaaatttggccagtgttctctttcatatctgacacggactttgaatacaacatgtacataacatgcaaaattttatgatccttaataaagtaccttgagatacctaaattttacattaattattttttaccaaaatttacgtacttatcaaggatggtaaaattatccaaatagcatcagtaaaaggacagaaaattcacaacaatttcattatttcaagattgctttctgtcatatttatatatccttacatgagtgcacaacaagcacaaagacatggtaatctcatcagattcagcacacaaatgctcactgtccttgtagtaaacagtgatataattcagatcagtgacaagtgggacaatttcaaaatcgaaaactcacaaatgaaattttgcaatgtcaaaagtacacactcaagtaaactattgccaaactccgaactttctaaaaaaagaacaattttacggtccttaagaagataccatgaggtatcgtaaaattgctcttctaaaaatgctcggaaccgggttctacaattggtcatctgcttctataaacttccagcacatgaaaaaaaaaggatcaactcaatcatccctactaattagattcatcttagtatcttacatttgaatttacaggaaatgaaccaaacaccagctacatttaaatttcgtttcgaagttcgaacagctacacatcagtcagtgcaacagtatcagttttcgcagagaattgaccgttga</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0192800, RefSeq:Os07g0192800