Os07g0193200

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Revision as of 08:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0193200| Description = Ankyrin repeat containing protein| Version = NM_001065640.1 GI:115471012 GeneID:4342634| Length = 3199 bp| Definiti...")
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Gene Name

Os07g0193200

Description

Ankyrin repeat containing protein

Version

NM_001065640.1 GI:115471012 GeneID:4342634

Length

3199 bp

Definition

Oryza sativa Japonica Group Os07g0193200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:5062778..5065976

Sequence Coding Region

5062778..5063089,5063912..5064194,5064883..5065976

Expression

GEO Profiles:Os07g0193200

Genome Context

<gbrowseImage1> name=NC_008400:5062778..5065976 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:5062778..5065976 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatccacggctgcacaaggcggcggtgcaggggaacacggcgagcctggcggcgctgctgggggaggagcagggcggcggcaagatcctcaactcgacgacgccgcaggggaacacggcgctgcacatcgccgccgggctcgggcgcgtcgcgttcgccgaggccgccgccgccgagcacggcgacctcctcgtcgccaggaacgaccagggggacacgccgctgcacctcgccgccagggccggcaagatggccgtcgccgacatgctcatcaccttcatcaccatggctgggccttgttggccggaggaggagccactgatgatgatgaacaagacacggaacacgccgctgcacgaggcggtgaagcagcggcggagcgcggtggcgctgcggctgctggaggcggagcccaactgcgggcacacgcccaacgtggacatgcagacgccgctgcacatcgccgcccgcgagggcctcgccgacgtcgtcgacaagatcctcgaccagccatgggtccccgagaagttcgtcaccgccgacaacgtcagcggcaccgccctccaccaggccgtcctcggcggccacacccgggtggtggagatattgctgatgaagacggcgccggggctgatcgacctgacggacgccgtcggcaacacggcgctgcacttcgcggcgcagaagaacgacaagcgcatggtgcggatgctgctcgaccacaagcccgacctcgcccaccgccgcaacgagcggcagcagtcggcgctccacgtcgcggcctactacggctcgacggcagcggcggcggagctgctccggcacagccccgacgcggcggagatgctggaccgggagggccggaacgccgtgcacgtcgcggtgtcgagcggcaaggtggacgcgctccggtgcctcctcggccgcgtccgccccgccgaggtggtgaaccgcggcgacaactccggcgacacgccgctccacctcgccgcgaagatggcccgcatcaagtcggcgctgatgctgctcagggacccccgcgtcgacccctgcctcctcaaccgcgaaggccactcggcgcgcagcctcgtggaggagcgcgtcgccggcggcgagatggacgcctacgtcgtctacctctgggagaagctcaagaagtacgagtcgcggcggtgcaagaaccagcagctgccgccggtggcgacgtaccagtcgctgcgcagccggcggccgggctccggcagcaacgacgagtacttcgagctcagcgtcggcacctacaccctcgtggccaccctcatcgccaccgtcaccttcgccgccacattcaccatgcccggcggctacaaccagaacacggggctcgccatccacgccgacagggcgccgttcaagatcttcgtggtgtccaacaccgtcgccatgtgcagcgccatcgtcgtcgtcttctgcttcatctgggcgtggagggaccccgtcaagttcaagctcgaccagctcacctggggacaccgcctcaccgtcgtcgcctgcctcgccatgatcgtctccctcatgacgtccgtctacctcaccgtcctccccacggagcggtggctggcgtacctggtcatcgccatcggagcctgcactccggccgtcgtcatactcatactgcgctgggaggtgttctacgtgccattgtga</cdnaseq>

Protein Sequence

<aaseq>MDPRLHKAAVQGNTASLAALLGEEQGGGKILNSTTPQGNTALHI AAGLGRVAFAEAAAAEHGDLLVARNDQGDTPLHLAARAGKMAVADMLITFITMAGPCW PEEEPLMMMNKTRNTPLHEAVKQRRSAVALRLLEAEPNCGHTPNVDMQTPLHIAAREG LADVVDKILDQPWVPEKFVTADNVSGTALHQAVLGGHTRVVEILLMKTAPGLIDLTDA VGNTALHFAAQKNDKRMVRMLLDHKPDLAHRRNERQQSALHVAAYYGSTAAAAELLRH SPDAAEMLDREGRNAVHVAVSSGKVDALRCLLGRVRPAEVVNRGDNSGDTPLHLAAKM ARIKSALMLLRDPRVDPCLLNREGHSARSLVEERVAGGEMDAYVVYLWEKLKKYESRR CKNQQLPPVATYQSLRSRRPGSGSNDEYFELSVGTYTLVATLIATVTFAATFTMPGGY NQNTGLAIHADRAPFKIFVVSNTVAMCSAIVVVFCFIWAWRDPVKFKLDQLTWGHRLT VVACLAMIVSLMTSVYLTVLPTERWLAYLVIAIGACTPAVVILILRWEVFYVPL</aaseq>

Gene Sequence

<dnaseqindica>1..312#1135..1417#2106..3199#atggatccacggctgcacaaggcggcggtgcaggggaacacggcgagcctggcggcgctgctgggggaggagcagggcggcggcaagatcctcaactcgacgacgccgcaggggaacacggcgctgcacatcgccgccgggctcgggcgcgtcgcgttcgccgaggccgccgccgccgagcacggcgacctcctcgtcgccaggaacgaccagggggacacgccgctgcacctcgccgccagggccggcaagatggccgtcgccgacatgctcatcaccttcatcaccatggctgggccttgttggccggaggtatccgtccgttttctttcttctagctttaattcgtcgtcaccggttgaatacagggtttgatactatttcagttaggctatttctgttgggtaccgatacaactgaaatttcgggtatttcgttttgacactatttaaaatttgcacaacgatttgtcaaatataaataaaattttctaaattcacaaaaaaaaattgtaaataacctgaaaattttaggccaaatagttttctaggtgtggggtccaatagactcgaagtttcagaaatttcgttttagaattttgaaccctggttgaatataagaaattcgaccatccggtatataattgtgacaagagagttgccatttttttgcaatgtagaatttgatactttttataaatctcatatgtaagaaatcgagagctgtcaaattcagcattataatgtgtgttagtaccttttggtaatcactaaaagacatcactcattgtgatatacttttatctgtttaaaaatataaacaaccataaaattaacatggtgtgaaaattctttcaaaaaatgaatttagtaataccatatattttgtcattttagttgtacaaatgtcgattcccttttttacagagctatagagccttatatttcaagacgaatgaagtatattcttttcaaataaatacattcttgctcctacgagtgctttgcgagttgataattacgttactctccctccgtgtagggaaatataaagtatattttgaccatacaattttggattaagatttaagactataatatttatgcgaaaaatgtacgtcatgtatgtatgtaggaggagccactgatgatgatgaacaagacacggaacacgccgctgcacgaggcggtgaagcagcggcggagcgcggtggcgctgcggctgctggaggcggagcccaactgcgggcacacgcccaacgtggacatgcagacgccgctgcacatcgccgcccgcgagggcctcgccgacgtcgtcgacaagatcctcgaccagccatgggtccccgagaagttcgtcaccgccgacaacgtcagcggcaccgccctccaccaggccgtcctcggcggccacacccgtaagaagaaattttgctcaaattaattcaaagagtactctttttgatgaattccagtactcaatatttttttttccacatccaacccctgaatgttaatgaatctagacatatatctcaatatgaatgtggtaaatgttagaatgacctacatgatgaaacggagggagtaacatttatatgttcaaaccttcacttaaactttgctttcttaccatgcttacgctcttacacataacatcattatataagtataaatttaataaccaatgattgatgatatgtaaatatgttttattaattattcaaaaactacatactccctccgtcctttaatattagcaacctagaaccggataattagttttatggtctaatgaatcagtcaggaggcctgtccagattcattatatgaaacgtcacatcctatcctagattgctagttgctatattatgggatactgggagtaattgtttaagcttgcgattttcaaaactatcttagcggtaaataatgaatgatattacaaagtttgggattgaaagtccagttttaaagtgttagatcaccgtcttccatcgttagtttagaggggtatatggatacttttaaaaaaaaaggtgaatagatttttgaggcatttgaatcaaatttgaagagatttgagtgtgtttgtgtgtggagcaggggtggtggagatattgctgatgaagacggcgccggggctgatcgacctgacggacgccgtcggcaacacggcgctgcacttcgcggcgcagaagaacgacaagcgcatggtgcggatgctgctcgaccacaagcccgacctcgcccaccgccgcaacgagcggcagcagtcggcgctccacgtcgcggcctactacggctcgacggcagcggcggcggagctgctccggcacagccccgacgcggcggagatgctggaccgggagggccggaacgccgtgcacgtcgcggtgtcgagcggcaaggtggacgcgctccggtgcctcctcggccgcgtccgccccgccgaggtggtgaaccgcggcgacaactccggcgacacgccgctccacctcgccgcgaagatggcccgcatcaagtcggcgctgatgctgctcagggacccccgcgtcgacccctgcctcctcaaccgcgaaggccactcggcgcgcagcctcgtggaggagcgcgtcgccggcggcgagatggacgcctacgtcgtctacctctgggagaagctcaagaagtacgagtcgcggcggtgcaagaaccagcagctgccgccggtggcgacgtaccagtcgctgcgcagccggcggccgggctccggcagcaacgacgagtacttcgagctcagcgtcggcacctacaccctcgtggccaccctcatcgccaccgtcaccttcgccgccacattcaccatgcccggcggctacaaccagaacacggggctcgccatccacgccgacagggcgccgttcaagatcttcgtggtgtccaacaccgtcgccatgtgcagcgccatcgtcgtcgtcttctgcttcatctgggcgtggagggaccccgtcaagttcaagctcgaccagctcacctggggacaccgcctcaccgtcgtcgcctgcctcgccatgatcgtctccctcatgacgtccgtctacctcaccgtcctccccacggagcggtggctggcgtacctggtcatcgccatcggagcctgcactccggccgtcgtcatactcatactgcgctgggaggtgttctacgtgccattgtga</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0193200, RefSeq:Os07g0193200