BGIOSGA009393

From RiceWiki
Revision as of 18:56, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA009393

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009393, complete gene.

LocusTag

OS03G0859800

Ensembl Transcript ID

BGIOSGA009393-TA

Ensembl Protein ID

BGIOSGA009393-PA

Length

2432

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:40718190..40720621

Sequence Coding Region

40720423..40720621,40720159..40720355,40719924..40719997,40719699..40719753,40719548..40719622
,40719391..40719464,40719252..40719300,40718621..40718705,40718328..40718384
,40718190..40718236

Genome Context

<gbrowseImage1> name=IndicaChromosome03:40718190..40720621 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:40718190..40720621 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTTGTGTACGAGCAGGATCCGGATGTTCTCCGATGGAGCCTTCACCTTCTTCTTCCACCCGCCGCTGCCCTACACTACCAACAACGCACCAGCAGCGTCGACTGCGATGAGATGATCGCCCACGCCCTCCAGGAGGAGCTTTCCTACGCCCAATCCCAATCCCTATCCTCCTCCATCCTCCATCTCCCCCCCTCTGCTCCTCCACTAAAGGAAGACGAACAAGATGATGCGCCACCACCACCACCACCCCCCTTTAGTTCTTGTTCAACCCCTGCAGATTATACTAATACTAATAATCATAATGCCCATGACTGCTTAATCGAGTTTGTCGATGATTTCTCTGCTCTTGATGGCCAAGTTGGCAAAAGATTACACGACATGATTCCCATTCCTCATGTTCCAAAAACTAACGGGGACATTCCTTCTGTTGATGAAGCCTTTTCAGATCACCAAAGACTCCTTCACAGGTTGGAGCTGTATGATCTTGCTGAGCTCAAGGTTGAAGGGGATGGCAATTGTCAGTTCCGAGCATTGTCCGATCAATTTTACCGCACCACTGAACACCACAGATTTGTTCGGCAACAAATAGTGAAACAGCTTGAGTCTTATCCGGAAATTTATGCAGGATATGTCCCTATGGATTATAGGGAATATCTAAAAAAGATGATAAAGAACGGGGAGTGGGGTGACCACGTTACATTGCAGGCTGCTGCAGACTCGTATGGTGTAAAGATTTTCATCCTGACATCATTCAGAGATACTTGCTACATTGAAATCCTTCCTGTTGTTCAGAAATCAGAAAGAGTTATATGCTTGAGTTTTTGGGCTGAGGTGCACTACAACTCGATATATCCAGAAGGAGAGTTACCAGTTATGGAGAACAAAAGGAAAAGGTGGTGGCATTTTTAG</cdnaseq>

Protein Sequence

<aaseq>MVVYEQDPDVLRWSLHLLLPPAAALHYQQRTSSVDCDEMIAHALQEELSYAQSQSLSSSILHLPPSAPPLKEDEQDDAPPPPPPPFSSCSTPADYTNTNNHNAHDCLIEFVDDFSALDGQVGKRLHDMIPIPHVPKTNGDIPSVDEAFSDHQRLLHRLELYDLAELKVEGDGNCQFRALSDQFYRTTEHHRFVRQQIVKQLESYPEIYAGYVPMDYREYLKKMIKNGEWGDHVTLQAAADSYGVKIFILTSFRDTCYIEILPVVQKSERVICLSFWAEVHYNSIYPEGELPVMENKRKRWWHF</aaseq>

Gene Sequence

<dnaseqindica>1..199#267..463#625..698#869..923#1000..1074#1158..1231#1322..1370#1917..2001#2238..2294#2386..2432#ATGGTTGTGTACGAGCAGGATCCGGATGTTCTCCGATGGAGCCTTCACCTTCTTCTTCCACCCGCCGCTGCCCTACACTACCAACAACGCACCAGCAGCGTCGACTGCGATGAGATGATCGCCCACGCCCTCCAGGAGGAGCTTTCCTACGCCCAATCCCAATCCCTATCCTCCTCCATCCTCCATCTCCCCCCCTCTGGTATTCCCTCTTCCCTTTCCTCCGCTCTTGTACACTACAGTATTAATCTTTCTTGTTTTTCCTACAGCTCCTCCACTAAAGGAAGACGAACAAGATGATGCGCCACCACCACCACCACCCCCCTTTAGTTCTTGTTCAACCCCTGCAGATTATACTAATACTAATAATCATAATGCCCATGACTGCTTAATCGAGTTTGTCGATGATTTCTCTGCTCTTGATGGCCAAGTTGGCAAAAGATTACACGACATGATTCCCATTCCTGTAACTAACTCTCTACTGCTTATTCCCCACCTTCTCTTCAACCATTCATCATTTAAATATTCTTGTCAAAATATTAATCCATTAATGATTACCTTGCTTCTTCCTCTTCTTCTTCTTGATGCTACTTGTTGGTTACCCTTTCCTTCCTTCTCTTATTGTAGCATGTTCCAAAAACTAACGGGGACATTCCTTCTGTTGATGAAGCCTTTTCAGATCACCAAAGACTCCTTCACAGGTAATAAATTGCCCTCAACTGTATTTCTAACTCTACCAATACAACTTTAACCTCATGCCAACTTTTCTATGTTCATGTCTTAGTAATGCGCGAGTCTCCCATAGGTGTTTCACTTAATGTTGGTTCTGGAAACTGACCCCATGCATGGCGCCATGTGATTTCTTATTTAGGTTGGAGCTGTATGATCTTGCTGAGCTCAAGGTTGAAGGGGATGGCAATTGTCAGGTATTACTTCAAATATGTACTCTTTTTCTCTATTTTATGCTCTACTTATCTCTTTTAGCATGTATCTTATACACAGTTCCGAGCATTGTCCGATCAATTTTACCGCACCACTGAACACCACAGATTTGTTCGGCAACAAATAGTGAAACAGGTTATTCTTGGTGAAGTCATCATGTTTTCTTGTTACAACTCTACTTCCTCATCTCATTTTTCCCTTTTTCAACCGTTCCACAGCTTGAGTCTTATCCGGAAATTTATGCAGGATATGTCCCTATGGATTATAGGGAATATCTAAAAAAGATGATAAAGTAAGTATTTCTCGTTTTTATTAACAAGTAAATCTTTGCTTTATAGTGTAACATTAGGCATTTTCACTTTGTGGCCACAAAATCGACCAGGAACGGGGAGTGGGGTGACCACGTTACATTGCAGGCTGCTGCAGACTCGGTAAAGATGATGTTTCCACACTTCCTGACTTATTAAATAATTATTCTTCTGTTTATCGGAATTATGCTGTATACAGAATAAGAGTTATTTGTATTGGACAGCATGGTCTGGGATTCATTAAGTGATGAATAATCGAAAGAAATCATATATATCTGAATAATTTAAATCTCAACAAAAAAAGAATGGTATTTTCTCTAGTTTTTATTTTGGTAACCAGCATACCTTAACAGGTACGTAGTATATTGCAATCTCATGCACATCATTAATATAGTATAGGTATTGCTCCCCCTGGACTTGGTCGTGCTGCTTTTGTGCTACTTGATTTTTCTTCTCTTTGCCCAACACTCAAACTTCATGATTCTCATAGGTGGTATTGTAATGTCCTCCCTTATCATAATACCAGGCCTATACATCTGTTGTGTTCTCGTTTGAGATTGAGTAGCATTTTGTGAATGACCAAGTCATGGATTTCCTAGAACCAGGGATACCGTGCATCTGCTCCTTGCTATCAATGTGAAACTCAAGTATCTGCATTGTTTTTTGCAGTATGGTGTAAAGATTTTCATCCTGACATCATTCAGAGATACTTGCTACATTGAAATCCTTCCTGTTGTTCAGAAATCAGAAAGAGGTAACCTTTCTTTTCAAATTATGTTGCTACTGAATTGTATTACTGAAATTAGCAACTACTTATATTATCCAGTCAAACATAGATGCAGATCTTCATCAGTTGATATGACCCGCCTTATCATTAAGAATCTCTGCATGTAACTTCATTGTTCTTAGTTAGTTTGCATAGTGGATTGTACTTTTTCAATAGATGTGTATCTAATGTGTTTCTGTTCATTTTTTCCTTAAAAAACCCAGTTATATGCTTGAGTTTTTGGGCTGAGGTGCACTACAACTCGATATATCCAGAAGGAGGTACAGTTTGTCATTTAGATACCGTGTTCATCTAGGAGTGTCTCTTTGGCGGATTGATGCGGTAGCTCACCAGTGCATGTTTGTGGTGCAGAGTTACCAGTTATGGAGAACAAAAGGAAAAGGTGGTGGCATTTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009393