Os07g0194100

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Revision as of 08:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0194100| Description = Similar to OSK2 (Fragment)| Version = NM_001065645.1 GI:115471022 GeneID:4342639| Length = 4788 bp| Definition = Or...")
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Gene Name

Os07g0194100

Description

Similar to OSK2 (Fragment)

Version

NM_001065645.1 GI:115471022 GeneID:4342639

Length

4788 bp

Definition

Oryza sativa Japonica Group Os07g0194100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:5134662..5139449

Sequence Coding Region

5134686..5134906,5135038..5135233,5135544..5135726,5135987..5136118,5136815..5136999
,5137108..5137198,5137558..5137662,5138335..5138745,5139132..5139251

Expression

GEO Profiles:Os07g0194100

Genome Context

<gbrowseImage1> name=NC_008400:5134662..5139449 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:5134662..5139449 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagggcggcggcggcgcggcgtcggcggcggcggcggcggcggcggcggcgacgcagcagcaccgggagctgctcgagcggtacgagctggtgcgggtgcgggggcgcggtagcttcgcgcaggtgtgggaggctcgccaccgccgcaccggcctcagcgtcgccgtcaagatcctcaacctcgccggacttctcgccagcggcatccccatccgcaaagtggagagggagatcgcggtgatgaggctgctgaaccacccgcacatcgtgcggttccacgaggcgatcgccggcggcgacggcggcggccacgtgtacatcgtgatggagctcgcgacgcaggggcagctctacgattacgtcacccagctcggccgcctccgcgaggatgacgctcgcaggatcttccagcagattatatcaggcgccgaatactgccaccacaacatggtcgtccaccgtgacctgaaactggagaacatcctgatggattcagagatgaacgtcaagatcgtcgacttcggtttcagcaagttcttcaggcacaacaaggtgctcagcgcgtcatgcggaagccgagaatatgccgctcccgagctactcgcgggtagaaaatatgttggtccacctgtggatgtttggagctgtggagtaatcctttacatcctcttctgtggacgcttgccctttgacagcgccgatgtatcagagctgcacaggatcatcaagagaggagagttcagtatcccaccgtacgtgcctgacgacgcgagggatctcatctccagcatgctgatcgtgagacctgacaagcgcctcaccatcaccgaggtcaggacgcaccgttggctgcagcactccatccctcgctacctcgcaatgcctcctctcaacgctcgcacacagatcaccaggattgatgctgagactgtcgacaaggtagtcggccatggctttgaaaggaggtacttggttgaatcacttgagaacagagtcgaaaacgaggcgacggtcgcctacaacctgatcctcaataagaagttcgatgccccaacacgttatgtttggacaattgacgtctatcaagaagctggacaaagtaacaccacgggagcagcagaagcaactggcagcagtgctgccggagagccgccggtcgccgtcgccggagaagacgacggacgcaacaacggatgggcgctgggaggggtggagttccacgagtgcccccgcgaggcgatgcgcgccatcgcggcggcgctgcgcgagaccggcgtcgtctacgcgcacgacgacgacgaccgcggccgctacggcaagctgctctgcgcacgcttcgccggcgccgccggcgtccgccgcatcatccgcagctacctcgccgccaccgacgacgcgccctcctcttcctcctccgccggtggtggcagtggcagaggtgaggctggccatggcggtggagctcccgtcgatgatgctgtcctcgagagcttgtctgcggctgtgttctttgaaattcagctgtacaagtcagaaggggaagggaattacctgatggatctgaagaggctttctggcccacagcttcaatacctcaacatatgctcagagttaagctccaagttgagagcaattaactga</cdnaseq>

Protein Sequence

<aaseq>MQGGGGAASAAAAAAAAATQQHRELLERYELVRVRGRGSFAQVW EARHRRTGLSVAVKILNLAGLLASGIPIRKVEREIAVMRLLNHPHIVRFHEAIAGGDG GGHVYIVMELATQGQLYDYVTQLGRLREDDARRIFQQIISGAEYCHHNMVVHRDLKLE NILMDSEMNVKIVDFGFSKFFRHNKVLSASCGSREYAAPELLAGRKYVGPPVDVWSCG VILYILFCGRLPFDSADVSELHRIIKRGEFSIPPYVPDDARDLISSMLIVRPDKRLTI TEVRTHRWLQHSIPRYLAMPPLNARTQITRIDAETVDKVVGHGFERRYLVESLENRVE NEATVAYNLILNKKFDAPTRYVWTIDVYQEAGQSNTTGAAEATGSSAAGEPPVAVAGE DDGRNNGWALGGVEFHECPREAMRAIAAALRETGVVYAHDDDDRGRYGKLLCARFAGA AGVRRIIRSYLAATDDAPSSSSSAGGGSGRGEAGHGGGAPVDDAVLESLSAAVFFEIQ LYKSEGEGNYLMDLKRLSGPQLQYLNICSELSSKLRAIN</aaseq>

Gene Sequence

<dnaseqindica>25..245#377..572#883..1065#1326..1457#2154..2338#2447..2537#2897..3001#3674..4084#4471..4590#acacgctcagtgaggcgatcgaggatgcagggcggcggcggcgcggcgtcggcggcggcggcggcggcggcggcggcgacgcagcagcaccgggagctgctcgagcggtacgagctggtgcgggtgcgggggcgcggtagcttcgcgcaggtgtgggaggctcgccaccgccgcaccggcctcagcgtcgccgtcaagatcctcaacctcgccggacttctcgccagcggcatccccatccgcaaaggcaagcagccaccgccttcgtcttcttcttcttcttcctctccgatcgtcgagctcgagcgatccgtctctcatcttgaattcttgattttctttctctcctgaattttcgatcggcggcggcggcggcagtggagagggagatcgcggtgatgaggctgctgaaccacccgcacatcgtgcggttccacgaggcgatcgccggcggcgacggcggcggccacgtgtacatcgtgatggagctcgcgacgcaggggcagctctacgattacgtcacccagctcggccgcctccgcgaggatgacgctcgcaggatcttccagcaggttgaaaaccctgctttcttcagctcttcacaagttcagagttaacaaaaaagaagaagaactctgcatttttgcaccgatttattgctccccattttgaactgaaatttcgacaatgatttgtgttagtctacgagatttttttatggtttgatgaacgccgatttccatgttccaaactttgaaaaattttactctgagaaagaggagaaagaaagtcagacgacataaacattttaatgaaatgttgttaatttgatgatgcaacaacgaatgcattttttttaattggtcaattcgatggaggcagattatatcaggcgccgaatactgccaccacaacatggtcgtccaccgtgacctgaaactggagaacatcctgatggattcagagatgaacgtcaagatcgtcgacttcggtttcagcaagttcttcaggcacaacaaggtgctcagcgcgtcatgcggaagccgagaatatgccgctcccgaggtcagccacaaattcacaaatattctttttctcatatgaaatattcctaaccattccaaaatacatagacggaaatgcttatattttggaacggaccggagagaatacatagttcaatgtcaatacgcctagtaattagaagaaatttaagtgttaaaaaaaaggagttacatgtcgtcgtcgatcatatagtaacttggggaatgtattgaaattcatatgtgagatgtttatgttgcttattgtaatttgtattgtagctactcgcgggtagaaaatatgttggtccacctgtggatgtttggagctgtggagtaatcctttacatcctcttctgtggacgcttgccctttgacagcgccgatgtatcagagctgcacaggatcatcaaggtaggaaattactcttcgaattctaatcacaatagttacaatatctaattaaccgtgttaatattaacaaaaagaatgactttgatataaacataaacaacgtatatgaagttatctgaattagaagttcctgagttcaaatcttgtagtatatagcctagtagttacagtgacctgagtagtaccccaaggtcctgagttcaaatcttctatggagcgaatttcagattgggttgttttcggggctaagttccctatttcaatggccgtatatatccggttggatatagaggccgggtaaaaaaatacccttatctaaaaaaaaatctgaattagaagttcaacatcatggatactaaaatgtcaattgtaaaacagctgacaataaattattcgaccgaatgactgtagaccggccaacaaatacggtataataagaagttataaactgtgaattgtaaaacatctgaaaaaaatatattattcagctgaattactctagaccagcaaataaaagaaggtataaaattccaactgtaaaacatatgacaaaaaaatatattattcagctgctgaacaactgtagacaagcaaatggaagaagaagttatcagtggtcaaaactgaaaatcccaatgagattgagaaacagctgatctgtttttttcttcttcctctcttcgtattgcgttgcagagaggagagttcagtatcccaccgtacgtgcctgacgacgcgagggatctcatctccagcatgctgatcgtgagacctgacaagcgcctcaccatcaccgaggtcaggacgcaccgttggctgcagcactccatccctcgctacctcgcaatgcctcctctcaacgctcgcacacagatcaccagggcaagtgttgcttaattaattacttttgattaattatgtgctatttgggtgcttaattttaattgattacgcatttttttgattaattgtgtttatatcttgtgctagattgatgctgagactgtcgacaaggtagtcggccatggctttgaaaggaggtacttggttgaatcacttgagaacagagtcgaaaacgaggtatgtaatgtactacctcatttttaaaatatatgacgccattaacttttcgcataacgtttaaccattcgttttattcacaaatttagtatgcatatataaaattatatgttatgattgtattttatttgataataaaacaaatcataacaaaaataaatgaataagatgaatggtcaaactttgtgaaaagtcaacgtcatcatacattttgaaagtaacaactataagagtattggtacatagaaaggttaatgacatgccactcatgacatgttggcaacatatacatacagatggatcgatgcaattgcaattcacttgtggttcaaaatatgcatgtatggatttgtttgtaggcgacggtcgcctacaacctgatcctcaataagaagttcgatgccccaacacgttatgtttggacaattgacgtctatcaagaagctggacaaagtaacaccacggtacgtatagaaactaactagttctgcagaaaataaatcttcattcatggcaatactaaaattcccatgtccaaggacaaatatcttggatatgtgcaattggacatgcacttcaaagttcaaacatatgactctggtggattgttttcttttgagtatgacagtaaaagttttccataaaattcttatttgagcacataaaagtatattcacgatgttcaattttaccaatctagaattaatgttgaataatttctaattcagtactccatccatctagactgataatacctatcgttttaaaaagtatacggtcttcaaaaaaaacaacattgaccactattttctattaaaatatgtatagataaatatatgattttgttggagcacttttaagaccaatctatatatatggtcaccacatttctaagacaaacattttagatgttatttataattaaaagtttttaaagtttgacaatactcttatccaaaacaataagtataatcaacctggagtaatgtttatagacaaaaatgttttatttgcacaataatgatcaagaaatttctttgtactaaacaaagtggattttccttttttttaaaaaatctaacactgtattggatcaactgattcaacaccatcatacacctatttgctctggacagggagcagcagaagcaactggcagcagtgctgccggagagccgccggtcgccgtcgccggagaagacgacggacgcaacaacggatgggcgctgggaggggtggagttccacgagtgcccccgcgaggcgatgcgcgccatcgcggcggcgctgcgcgagaccggcgtcgtctacgcgcacgacgacgacgaccgcggccgctacggcaagctgctctgcgcacgcttcgccggcgccgccggcgtccgccgcatcatccgcagctacctcgccgccaccgacgacgcgccctcctcttcctcctccgccggtggtggcagtggcagaggtgaggctggccatggcggtggagctcccgtcgatgatgctgtcctcgagagcttgtctgcggctgtgttctttgaaattcaggtattctcctcaagcgcatcattcatacactctcgtaacctcatcttttcgcttatatttatatttatcagttaaagtttaaatatttaactttaaatttagaggtgattttaaagtttttcatcgtagtttattttttagtcttttcatttatatcgttaagaacatgtatataagaactttattaaaaaaatatttttcatttttaaatatatcatttggcttgttcctcgaataagccaaacaatgagactgatagtgtttctccccttgacaattattactccctccaaatcttaatacttgcaaaaaaaaacatgtgtttaaccgttcctttaatttttttttacccatgataaaaattttacctcttgtgcttattgtagctgtacaagtcagaaggggaagggaattacctgatggatctgaagaggctttctggcccacagcttcaatacctcaacatatgctcagagttaagctccaagttgagagcaattaactgaggcggtagaaattaacagtctcctccaaggaagaaataatctgaggaaatattaggttatccctcttttccttttgtttttagtgaaaggaaaagctagcatgtatgagagggaaaaattaaagaaaaatacatataacactatgagatgaacttatacaaatatatactaattaaatccgtcaggatttatcaattt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0194100, RefSeq:Os07g0194100