Os07g0194800

From RiceWiki
Revision as of 08:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0194800| Description = Conserved hypothetical protein| Version = NM_001065649.1 GI:115471030 GeneID:4342643| Length = 4317 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0194800

Description

Conserved hypothetical protein

Version

NM_001065649.1 GI:115471030 GeneID:4342643

Length

4317 bp

Definition

Oryza sativa Japonica Group Os07g0194800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:5160804..5165120

Sequence Coding Region

5163343..5163346,5164235..5165118

Expression

GEO Profiles:Os07g0194800

Genome Context

<gbrowseImage1> name=NC_008400:5160804..5165120 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:5160804..5165120 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tcgaaacggctacttcctccccttcctccccctccaccaccttctagaaccttccacgatgccgccgccgccgcggaagcgcctcggccgcgcggccctgctcctcgccgccgccgcctacctcgccttcctcctcctcttcgagctcccctccctcgacctcttcccctcctccgacgccgcggcgggcgcggcgatgcccacccaccgcccacgccgccgcgagctcgaggcctcgtcgtcgtcttcggcgttcgcttcccccgtcctccgccgccccgccacggcggtgtctcccgcgccggcttctgctgctgccgcggcggctggggcgctcccgatcttctcgtcgctgctcctcctcccccggcccaacgcgacggccaccccgttcgacgggaccgccgcggaggcgttcgccgcggcgaggccgcacctcgaccacctcaggactgctgctgctgcggcggcggaggaagcttcgtcgtcgtcgacggcgccgacgtgcccgacctcgatctcggtgcacgcggacgggttgcccggggacggggtgaggacggtggagctgccgtgcgggctcgcggtggggtcgcacgtgacggtggtggcgcggccgagggcggcgcggccggagtacgacccgaagatcgccgagaggaagtccgggcaggagccgctcatggtgtcgcagttcatggtggagctggtcgggaccaaggccgtggacggggaggccccgcccaggatactccacttcaaccccaggatccgcggcgactactccggcaagccggtcatcgagatgaacagctgctaccggatgcagtgggggcagtcgcagcgctgcgagggctacgcctcccgccctgccgacgagacagttga</cdnaseq>

Protein Sequence

<aaseq>SKRLLPPLPPPPPPSRTFHDAAAAAEAPRPRGPAPRRRRLPRLP PPLRAPLPRPLPLLRRRGGRGDAHPPPTPPRARGLVVVFGVRFPRPPPPRHGGVSRAG FCCCRGGWGAPDLLVAAPPPPAQRDGHPVRRDRRGGVRRGEAAPRPPQDCCCCGGGGS FVVVDGADVPDLDLGARGRVARGRGEDGGAAVRARGGVARDGGGAAEGGAAGVRPEDR REEVRAGAAHGVAVHGGAGRDQGRGRGGPAQDTPLQPQDPRRLLRQAGHRDEQLLPDA VGAVAALRGLRLPPCRRDS</aaseq>

Gene Sequence

<dnaseqindica>1775..1778#3..886#actcgaaacggctacttcctccccttcctccccctccaccaccttctagaaccttccacgatgccgccgccgccgcggaagcgcctcggccgcgcggccctgctcctcgccgccgccgcctacctcgccttcctcctcctcttcgagctcccctccctcgacctcttcccctcctccgacgccgcggcgggcgcggcgatgcccacccaccgcccacgccgccgcgagctcgaggcctcgtcgtcgtcttcggcgttcgcttcccccgtcctccgccgccccgccacggcggtgtctcccgcgccggcttctgctgctgccgcggcggctggggcgctcccgatcttctcgtcgctgctcctcctcccccggcccaacgcgacggccaccccgttcgacgggaccgccgcggaggcgttcgccgcggcgaggccgcacctcgaccacctcaggactgctgctgctgcggcggcggaggaagcttcgtcgtcgtcgacggcgccgacgtgcccgacctcgatctcggtgcacgcggacgggttgcccggggacggggtgaggacggtggagctgccgtgcgggctcgcggtggggtcgcacgtgacggtggtggcgcggccgagggcggcgcggccggagtacgacccgaagatcgccgagaggaagtccgggcaggagccgctcatggtgtcgcagttcatggtggagctggtcgggaccaaggccgtggacggggaggccccgcccaggatactccacttcaaccccaggatccgcggcgactactccggcaagccggtcatcgagatgaacagctgctaccggatgcagtgggggcagtcgcagcgctgcgagggctacgcctcccgccctgccgacgagacaggtgagctcgcagcgcggagatcgagctcttctgattcattccattttactaatttcattcggttcgatttgatttgatttgatttgattggattggattcggatttgcttcaatcagatcgtctggtggtgtgattccatgattgcattccgttagtttagaatcggcaaattcgatgttgatgatctggagttaggtgtgaagggggcggtttgttagttaggaaaaattagaggcgtcaacttcagtggtctaaattgcgtggaatagctttgcttggtggaaattggccagaaaggttcagcctttggcaagaaatttctagagaagggctgggtttgtttaccaatttctggagaatattttgatggtgattgtgtttgacctgaaaccgtgtctgttgcctgaatgtcgagtttgacttgataacgtgctgcggtgtcggtgggaagtgttaacttattattcttctctttttcttcctcaattagagggagctcaacgggttgattgcttagtttggcttgtaatagcctaaacgtcaaattggttgcaattaatctaatttagcaaatattgtgggagtgtagaagcttccaacttgcaagcatgcttgataacagtaggtctattttttgaatgagctataccagagtttgttctaaaaaaagagagctatacgagagttgcagcgagcatcttaaagcttgcagcatctcataactgggcattcttcaagacaaagttggaacatcattttttgcagcagatctagtttcttgtgatacaggaaaaagacttgtacttacaattaaagttacactgaagatctcttctactttaagagtgtagcgactttgcttcatggtgatgtctttggtctttcagttgatggccaacttaagtgtgagaaatggattcgtgacgacgacaagaagtctgaggaatcgaagatgaagtggtgggtaaagcgtctaattggtaggccaaaggatgtgcacatcagttggccataccccttcgcagaaggcaagctgtttgttttgactctaacagctggtttggaaggttaccatgtcaatgttgatgggcggcatgttacttcctttccttatcgcactgtaggtttttcttaaagcatcaaaaagtcattcagttgcatgagttcttgagcaccatcctgagatctccataactaattttgcccaactaatggtctctgcagggttacactcttgaggatgcaaccggcttatctctgaatggagacatcgatatcgaatccatttttgctagttccctgcccaattcgcatcctagttttgccccagagagataccttgaaatgtctgaacagtggagggcaccaccactaccaactgagcctgttgagctttttattggtattctttcagcagccagccattttgctgagcggatggctgtacggaagtcgtggatgatgtatacaaggaaatcgactaatatagtagctcggttctttgtggctctggtaactatcgattgacttaatggttttactactcttttgagtaaattcataatctaaccaattaaagtaaatttacagaatgggaaaaaggaggttaatgcagagctgaaaagggaagcagagttctttcaagacattgttatagttcctttcatggatagctatgaccttgttgttttgaagaccattgctattgctgagtatggggtaagtgaattgaacatgtaggactgttttgttattagacattagctgctatcccatctcacatgcttctctgcgttccaatttatccatatttatgctcatttaatttggtctgtttatgcaggtgcgagtcatacccgcaaaatacatcatgaaatgtgatgatgatacatttgttagaattgactcagtactggatcaagtgaagaaagttcgaagtgataagagtgtgtacgtaggaagcatgaactacttccataggccactaagatctggcaagtgggctgtaacttatgaggtaaattgttctttcccttattttaaagcaactactatgaatatcacattagacaagtgcaacttgaaaggatattgtgttgtgaaacatgcaataccctatttgccttgcagttgtgttttcatatgcttgctagccaatcattagatattcaccaactagcacatgttgttcttattttctcttcttcttttgatgaaatcgtcgacatgcataccattgttcatgtttccccttttatatgactatgaaccattagccgtgccactaaattatattcaaatatatagtatcttcacatatttaaaatccatgttagcttggccctttgaacaaggcaaacatgccggttgttcaaattgtacatatctcatgaaaaagctggcgctcaatcttctgcactgtccttagctgtcagcttttagcataagaaatggatgagacctcttcttgtcatcatattggatagcttcttttatttttgcaatagtaatattctaatgttgcaatgataactcctcttggcaggcatcatattagatagtttttttttttggcaattgtaatattctaatgttgcaattctgattctattttcaggaatggccagaggaggcatatccaaattatgccaatggacctggctatgtaatttcagccgatattgcacgctacattgtatctgaatttgacaatcagacacttcgggtaagcatcaactggacctagtatgtcctaccgtacatcctgctgtaacttgaactaaactgtagtgtatttctgtttcagctatttaagatggaagatgtaaacatgggcatgtgggtcgagaagttcaacaacacgcttcggccggtcgaataccggcacgatgtcaggttctaccagtctggctgcttcgacggctacttcacggctcactatcagtcccctcagcacatgatctgcctctggagaaaactgcagtccggaagctcacggtgctgcaacgtgagatgacaatggcagcaaaaattagccgtattttggagcaaatagagacgatgttaactcgtaagctcagctcgctgttggaacaccagaaaatcatcagcattcagcgatgctgacggttcggaggagcgctcatcttctggactggacctgatatatgattcgttcattcttttggtcggtggctccgtttcaagctgctgatttctgacacctgatcaatgatgttcttgccttcttggggattctttcgcctgttgatatttatactcgcgtcaaatttatttgacctaggaatttttgaggctggtggtggtggtggtggcggcggtggtatgccggcggcatgttttgtgtataaaaaggattttatgagttttactgtttgtgagtatatattcggtggactcctattggctg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0194800, RefSeq:Os07g0194800