Os07g0196700

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Revision as of 08:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0196700| Description = Conserved hypothetical protein| Version = NM_001065656.1 GI:115471044 GeneID:4342651| Length = 3435 bp| Definition ...")
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Gene Name

Os07g0196700

Description

Conserved hypothetical protein

Version

NM_001065656.1 GI:115471044 GeneID:4342651

Length

3435 bp

Definition

Oryza sativa Japonica Group Os07g0196700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:5269329..5272763

Sequence Coding Region

5269329..5269579,5270673..5270928,5271158..5271725,5271757..5272763

Expression

GEO Profiles:Os07g0196700

Genome Context

<gbrowseImage1> name=NC_008400:5269329..5272763 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:5269329..5272763 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgcacttttagtccgagagaagttgaggaccaattccacatatacagactgaaagatgagattgcagcagttgttgccacgatcgacaagatctacagccacctgcagcttgacaagggttcattggagaagaagaacggattttgctttggccttttggatcccgtaaccaacatcctcatcaacagcgccatctctgaattgtctcctgctactgcagctcaggcggtagtaggaggaggaggagagaaagctaaggacctgaacaacaatgctgctccgcgggtggaagcaggaggaggatcaagaaaacgacgacgaagaggagacaatgctgctgatctgagccagcgttcgcttgacggtctcaccgccttcctcacctgcctcttcccctacctcccggatgccgaggcacggctatacctcgacgccgcggacgctgacccaattgtggcctcgcttctcatcatcagaaggcgcggaatccgggagttcgacctcagctcccagcccaccgaggcagcggttgaggtcgccctcagatgcgccgcggtcgccgccaagcaccccgatccgcggagcctcgtgctagggtggaagctgctctcgcctgtcgtggaggcgctcttcggctctgcgccatcgtcaccacgcgagacgacgatgcacggcgacgtagcgcgtcgcgtactacgtcgcctacacaaggataatgcggcagctgatcctgtccttcggctggaaggatcgtgggaactcgccaagaggcggcttaagcgagaaagattgatgggaatttatgcagggcccaaatggctgcctcctgcccgggcacacatgaagcgagtgctgcttgcaacaatccatggattctacctgcaggcgatgggcaggctgccaacctcggagctgtgcgattcgtttcaccgcagcatgctcatgggtggccactgctacggtccactggaccctgtctccaacatcattgtcaacaccatctgtttccagtgggccatgattagcaccacgatgctgtcgtgcattgtagctcgatcgctctacggcctcgtgtccttcctgtgcactcgataccgaggcctcacacctgacctagccatgcagcgcctgctggtgaccggggttaacttgaaagctgctgatcccaacctttctcctacgcctagtgctactagtagaaaaaagcgtctggacttttcagattgtgctcaagttcttgacaatcctgacacttctcatattcagcactctgtggttgaagaaagcaccccttctgccggtgttgatgaatcatatattgccgcggccaccgccgggtttcatggctaccctcttgcgcagcaagagttccttgcgtcgccaactggtttactgagtaaacttgagcttgtctcagaggttctgcatatccaggtttgcgtcccaggatcacagtctgcctcggatggcccactctccccacagaagcttagtttgcttcgcacgatattacaacggtgtccctcctctactggcaagctgcaccaacaacaggatgtagcatgtagaaaggaggatcacccgtttgaacttcatttcatctgtggtgtcaatgagctggtatctggcccggtgcgcagcttgggtgagaaagttggagactacaatccatggactcgtgacaaatattatcacacccatatcaactttctagcagtttgcaaagcccgcttatatgatcctccaacactcttctttgctgaatgtggcaaagatggtgctgatacatgttggtgtgtccctgtgattccacagaaaccagaagctggacaagttcgttgtatttattgtgagtatcaagggaacagaattctgcatccaaccatggagagtttccatgggcgtgatgagttcgagaagttattctatggatcaaacggttcttacaccaatgataagctcatcacaaatagcgatttagaggtagattgggtacatggcgtgcaggatggtgccatctaccgggactgctgtcctgatagtgatgatgatgaagatgactggatagatattttctga</cdnaseq>

Protein Sequence

<aaseq>MRTFSPREVEDQFHIYRLKDEIAAVVATIDKIYSHLQLDKGSLE KKNGFCFGLLDPVTNILINSAISELSPATAAQAVVGGGGEKAKDLNNNAAPRVEAGGG SRKRRRRGDNAADLSQRSLDGLTAFLTCLFPYLPDAEARLYLDAADADPIVASLLIIR RRGIREFDLSSQPTEAAVEVALRCAAVAAKHPDPRSLVLGWKLLSPVVEALFGSAPSS PRETTMHGDVARRVLRRLHKDNAAADPVLRLEGSWELAKRRLKRERLMGIYAGPKWLP PARAHMKRVLLATIHGFYLQAMGRLPTSELCDSFHRSMLMGGHCYGPLDPVSNIIVNT ICFQWAMISTTMLSCIVARSLYGLVSFLCTRYRGLTPDLAMQRLLVTGVNLKAADPNL SPTPSATSRKKRLDFSDCAQVLDNPDTSHIQHSVVEESTPSAGVDESYIAAATAGFHG YPLAQQEFLASPTGLLSKLELVSEVLHIQVCVPGSQSASDGPLSPQKLSLLRTILQRC PSSTGKLHQQQDVACRKEDHPFELHFICGVNELVSGPVRSLGEKVGDYNPWTRDKYYH THINFLAVCKARLYDPPTLFFAECGKDGADTCWCVPVIPQKPEAGQVRCIYCEYQGNR ILHPTMESFHGRDEFEKLFYGSNGSYTNDKLITNSDLEVDWVHGVQDGAIYRDCCPDS DDDEDDWIDIF</aaseq>

Gene Sequence

<dnaseqindica>3185..3435#1836..2091#1039..1606#1..1007#atgcgcacttttagtccgagagaagttgaggaccaattccacatatacagactgaaagatgagattgcagcagttgttgccacgatcgacaagatctacagccacctgcagcttgacaagggttcattggagaagaagaacggattttgctttggccttttggatcccgtaaccaacatcctcatcaacagcgccatctctgaattgtctcctgctactgcagctcaggcggtagtaggaggaggaggagagaaagctaaggacctgaacaacaatgctgctccgcgggtggaagcaggaggaggatcaagaaaacgacgacgaagaggagacaatgctgctgatctgagccagcgttcgcttgacggtctcaccgccttcctcacctgcctcttcccctacctcccggatgccgaggcacggctatacctcgacgccgcggacgctgacccaattgtggcctcgcttctcatcatcagaaggcgcggaatccgggagttcgacctcagctcccagcccaccgaggcagcggttgaggtcgccctcagatgcgccgcggtcgccgccaagcaccccgatccgcggagcctcgtgctagggtggaagctgctctcgcctgtcgtggaggcgctcttcggctctgcgccatcgtcaccacgcgagacgacgatgcacggcgacgtagcgcgtcgcgtactacgtcgcctacacaaggataatgcggcagctgatcctgtccttcggctggaaggatcgtgggaactcgccaagaggcggcttaagcgagaaagattgatgggaatttatgcagggcccaaatggctgcctcctgcccgggcacacatgaagcgagtgctgcttgcaacaatccatggattctacctgcaggcgatgggcaggctgccaacctcggagctgtgcgattcgtttcaccgcagcatgctcatgggtggccactgctacggtccactggaccctgtctccaacatcattgtcaacaccatctggtacgagcacaacttcccggcaagcaaacagtttccagtgggccatgattagcaccacgatgctgtcgtgcattgtagctcgatcgctctacggcctcgtgtccttcctgtgcactcgataccgaggcctcacacctgacctagccatgcagcgcctgctggtgaccggggttaacttgaaagctgctgatcccaacctttctcctacgcctagtgctactagtagaaaaaagcgtctggacttttcagattgtgctcaagttcttgacaatcctgacacttctcatattcagcactctgtggttgaagaaagcaccccttctgccggtgttgatgaatcatatattgccgcggccaccgccgggtttcatggctaccctcttgcgcagcaagagttccttgcgtcgccaactggtttactgagtaaacttgagcttgtctcagaggttctgcatatccaggtttgcgtcccaggatcacagtctgcctcggatggcccactctccccacagaagcttagtttgcttcgcacgatattacaacggtgtccctcctctactggcaagctgcaccaacaacaggatgtagcatgtagaaaggtaaaaaagagagactataatcacatatgtcaatgcaggaataggttctggggtcagcatgcccgagtcaccagcatggtgagagatgcattggacaaattcaacaataccatggttggtttctccccctacactcctttactcattccatagttttcactttgtgtattctgtgtatttgtgctatgccgtgtttccaatctaacactcttcatactcgtggttgaaggaggatcacccgtttgaacttcatttcatctgtggtgtcaatgagctggtatctggcccggtgcgcagcttgggtgagaaagttggagactacaatccatggactcgtgacaaatattatcacacccatatcaactttctagcagtttgcaaagcccgcttatatgatcctccaacactcttctttgctgaatgtggcaaagatggtgctgatacatgttggtgtgtccctgtgattccacagaaaccagaagctggtatgctatagccttgaccttgcaatttccatcttgatatttttctatctagtagattgagctctttcttttttttatcaacttcacaatctgcaatgtttggttgcctataattcatccaaatatcatcaaaataatactgcatgtatgctatcgtcagtgctttcttatgcttaactatagagtttagttgctacatggtgggtacttttcacattttgatccgtagcccaatgcaatgccatcatggggcatcatgcagtagccattgtcccacctgattattgtgtcttacaaagaattttcagtaatacatcatttactgttgcatggtaatattgtttgttggagatcagttatacattacactaagatcatggaatatcttgatttgaaaatatttcgtggactgctcaccatatggtctatctttttctattacgcttcaagacaacattaaatcactgttctaaatagcaaccatgatgaccttgaaagaatttatagtctttatagcagactgaaaaattgttcttttaggtgactccctaatgaaagtggtaattggactggtgcttgatgagcaattatgatggcttgggtgatgttggctctactgggaatcaaaagaaattatcacataatagtttagatagaaatctgttggtataaattgggatggaataagatagaacatagacttattgcatgttattgccccttttgttatgatgcaagtttagtttatggtgcttgaacccccccccccccccccttttgctgttatagtcacgtagcacttactccctccgtcccaaaaaaactcaacctaggaggggatgtgacccctcataggacaacaaatctggataatctcctcctaagttgagtttttttgggacggagagagtagttgcttagccttagattcaattgatcctttgacagctccaaatttgttacgattcatcctaatgaagtatgctctcatagtcatatggaacaatgtgcgcctatttcaagggtatgcatgctgccatgatttctgatcccactaatttgtgtcgaaatgtgtttttgttatgaatggcaggacaagttcgttgtatttattgtgagtatcaagggaacagaattctgcatccaaccatggagagtttccatgggcgtgatgagttcgagaagttattctatggatcaaacggttcttacaccaatgataagctcatcacaaatagcgatttagaggtagattgggtacatggcgtgcaggatggtgccatctaccgggactgctgtcctgatagtgatgatgatgaagatgactggatagatattttctga</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0196700, RefSeq:Os07g0196700