Os07g0197100

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Revision as of 08:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0197100| Description = Similar to Hexokinase 2 (EC 2.7.1.1)| Version = NM_001065659.1 GI:115471050 GeneID:4342654| Length = 3362 bp| Defin...")
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Gene Name

Os07g0197100

Description

Similar to Hexokinase 2 (EC 2.7.1.1)

Version

NM_001065659.1 GI:115471050 GeneID:4342654

Length

3362 bp

Definition

Oryza sativa Japonica Group Os07g0197100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:5288538..5291899

Sequence Coding Region

5288588..5288889,5289257..5289407,5289543..5289725,5290063..5290137,5290248..5290403
,5290502..5290597,5290855..5290985,5291057..5291138,5291237..5291590

Expression

GEO Profiles:Os07g0197100

Genome Context

<gbrowseImage1> name=NC_008400:5288538..5291899 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:5288538..5291899 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccgccgccgccgccatcgcgtcgccgatcccggcggcgatcgccgtcgtgcagcagcagaggcgggggaggagccgcggcggcggctccggcgctgccgccgtccgctgctccgcggtggccccgacgtccgcgatcgcgcccatccttgccgacctgaggctgcggtgcgccgccccgctccccgtgctgcggcgcgtggcggacgccatggcctccgggatgcgcgccgggctggccgacgacggcgccggcgagctcaagatgatccccagccacgtctactcactccccactgggaatgaaacaggactgttttatgctctggaccttggaggcaccaactttagagtgctgagggtacaattgggaggaaaagataagcgcattatagataccgagtttgagcaagtctcgatcccaagagaaatcatgcatggtataaccgaggatttgtttgatttcatcgcgagtggcctgtcgagatttgtagcaacggagggtgataagtttcatttgccacaagggagaaagagagagttaggcttcacattctcctttccggtgaatcagacttctattgattctggcattctgatcaagtggacaaaaggttttgctgtctctggaactgctgggaaagatgttgttgcttgtctgaatgctgcaatggagaggcaaggccttgatatgcgtgtctctgccttggtaaatgatactgtgggaaccttagctggagcacgttattgggacgatgacgtaatggtcgcggtgattttgggcactggcaccaatgcatgctacattcaacgaactgaagctattccaaaattgcaacaccttaagcttgaaacaggaaacacgattattaacactgagtggggagctttctcagatggacttccattgactgaatttgacagagaaatggatgatgagagcataaatcctggtgaacagatattcgagaagacgatttccgggatgtatctaggtgaaattgtccgtagggtgctggtcaagatggctgaagtatctgatctctttggtcattccttccccaagaaacttgctgaaccatttgttctaaggacaccacatctatgcgctatgcaacaagacacctctgacaatcttggagaagttgagtccatcttgagtgatgtcatcggcgtgtcccaagcttctctgctggcacggagagtcactgtagaagtctccgactgcatcatcaggagaggaggccggttggccggggcaggaatcgtagggatccttgagaagatggagaatgactccagagggcacattttcggacgaagaacagtggtcgcgatggacggtggtctatatgagaagtaccctcagtacaggaggtacatgaaggaggctgtggctgagctactgggacccgagcgatcgaatcgtatcgccatcgagcacacgaaagacggatcagggatcggcgctgcgctgttggcagctgcaaactcaaagtatgctgctgctcaaatctctacaaggtga</cdnaseq>

Protein Sequence

<aaseq>MSAAAAIASPIPAAIAVVQQQRRGRSRGGGSGAAAVRCSAVAPT SAIAPILADLRLRCAAPLPVLRRVADAMASGMRAGLADDGAGELKMIPSHVYSLPTGN ETGLFYALDLGGTNFRVLRVQLGGKDKRIIDTEFEQVSIPREIMHGITEDLFDFIASG LSRFVATEGDKFHLPQGRKRELGFTFSFPVNQTSIDSGILIKWTKGFAVSGTAGKDVV ACLNAAMERQGLDMRVSALVNDTVGTLAGARYWDDDVMVAVILGTGTNACYIQRTEAI PKLQHLKLETGNTIINTEWGAFSDGLPLTEFDREMDDESINPGEQIFEKTISGMYLGE IVRRVLVKMAEVSDLFGHSFPKKLAEPFVLRTPHLCAMQQDTSDNLGEVESILSDVIG VSQASLLARRVTVEVSDCIIRRGGRLAGAGIVGILEKMENDSRGHIFGRRTVVAMDGG LYEKYPQYRRYMKEAVAELLGPERSNRIAIEHTKDGSGIGAALLAAANSKYAAAQIST R</aaseq>

Gene Sequence

<dnaseqindica>51..352#720..870#1006..1188#1526..1600#1711..1866#1965..2060#2318..2448#2520..2601#2700..3053#atcactcctccccctaccaacgatcagctcagcttcagcttctcctcggcatgtccgccgccgccgccatcgcgtcgccgatcccggcggcgatcgccgtcgtgcagcagcagaggcgggggaggagccgcggcggcggctccggcgctgccgccgtccgctgctccgcggtggccccgacgtccgcgatcgcgcccatccttgccgacctgaggctgcggtgcgccgccccgctccccgtgctgcggcgcgtggcggacgccatggcctccgggatgcgcgccgggctggccgacgacggcgccggcgagctcaagatgatccccagccacgtctactcactccccactgggtaaccaacctacttaaacagttaaacatacacttaactagctctaattacagattagctagctggtgttgctaatacatcgtcagctactgcaggcaatgttaatgcatcagcagttcataaagttattgttactttgttagtggatcatgtggtattttaattgttcagctggatctttgtgtgaactgaacttctgaactgcaacacagtgggcttgtgaatttctgattattttttcttttttgtattgtgtttagagtggagattgatcagctagtatatctttgcaacttgagctcaggaaattaatcttggttaattatttatctggttaattttgtgtttcatgattgttgtgctgaaggaatgaaacaggactgttttatgctctggaccttggaggcaccaactttagagtgctgagggtacaattgggaggaaaagataagcgcattatagataccgagtttgagcaagtctcgatcccaagagaaatcatgcatggtataaccgaggtttgttaatttttcacaagctgtgttcttctgagcttactctattatgtagtctgtgaaatgtgatgcattcatcagaatagctgcagggacatgtatatctgaatgcctgacaacattgttgtgtcaaagcaggatttgtttgatttcatcgcgagtggcctgtcgagatttgtagcaacggagggtgataagtttcatttgccacaagggagaaagagagagttaggcttcacattctcctttccggtgaatcagacttctattgattctggcattctgatcaagtggacaaaaggttttgctgtctctggaactgtaagactttatttcataatgcattttttatgtatagtttccatgattctttgattcatgatgtatggcactacaaattcttatcttgtcccgtttttatcctagtaggatatcctgtatatgacattttccatattggtctgaaactcatccgttctagaattcacgagaaaaaaaaactgattcatttgtagaatttctgatgccaagagttacaagttacaacagtgaaaaatcccttctagaacaaagaacactacttttactcactttccagatgatggtttatgaattagcaagttagtttctttgtcagttaaatctttgttttggacaggctgggaaagatgttgttgcttgtctgaatgctgcaatggagaggcaaggccttgatatgcgtgtctctgccttggtaagcaaaaagcctatgagaataccatggttatgggctagaaatgttcgtggaaagatatcctcttcacaatacatttataaccaaactattggaattccacttaacaggtaaatgatactgtgggaaccttagctggagcacgttattgggacgatgacgtaatggtcgcggtgattttgggcactggcaccaatgcatgctacattcaacgaactgaagctattccaaaattgcaacaccttaagcttgaaacaggaaacacggtatgccataacatagacaaattctctattaagttattgcaaatggaaagtgttacgaagttaaggaatttttcttgatggaagtctctgtactgcagattattaacactgagtggggagctttctcagatggacttccattgactgaatttgacagagaaatggatgatgagagcataaatcctggtgaacaggtgaaaaaaaatgctttcaatttttattttctaagataagcagaggaaggtcctactgtgcatactatatactgacaaaagtaaaacatagtttacttatatagaagaacgacagagtctcagggaaaggaggaaacatagtagaaaatttaagcaagattatttagccagtcttgactctgagggatatatttcttcttgctcttgaaaacataatcttgatatcctggtgtgcttgcaaattgcaatatgcgcagatattcgagaagacgatttccgggatgtatctaggtgaaattgtccgtagggtgctggtcaagatggctgaagtatctgatctctttggtcattccttccccaagaaacttgctgaaccatttgttctaaggtcagttctcatgctctagcatcacaattaaattaaagtattatgctaaggtgaaaaactccaaattacaggacaccacatctatgcgctatgcaacaagacacctctgacaatcttggagaagttgagtccatcttgagtgatgtcatcggcgtaagatacttactcctcatgtttcagtcacatcacaaagggcatctagctagcacatccaaacatgcaaaatttacccccaaaattcacatccacaggtgtcccaagcttctctgctggcacggagagtcactgtagaagtctccgactgcatcatcaggagaggaggccggttggccggggcaggaatcgtagggatccttgagaagatggagaatgactccagagggcacattttcggacgaagaacagtggtcgcgatggacggtggtctatatgagaagtaccctcagtacaggaggtacatgaaggaggctgtggctgagctactgggacccgagcgatcgaatcgtatcgccatcgagcacacgaaagacggatcagggatcggcgctgcgctgttggcagctgcaaactcaaagtatgctgctgctcaaatctctacaaggtgatcgcaattgttataattgttgagttactgggccgaattaattctctacaaggtgatctcaattgttatcattgttgagctactgggacctgaacaatccaagcatatcatcatatggtggcctcttatctgaagtatggaggggcttcatatatgctattcttctgtactactagtctactatactatataacgcatttgaggaaaagaaacaccagaaatttatcaacttatgttttgtataattcatcaacttatgtgtttgtatagttacagttcaccagaaattcatcagcttatgtatttgtat</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0197100, RefSeq:Os07g0197100