Os07g0198300

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Revision as of 08:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0198300| Description = Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor domain containing protein| Version = NM_001065660.1...")
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Gene Name

Os07g0198300

Description

Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor domain containing protein

Version

NM_001065660.1 GI:115471052 GeneID:4342656

Length

4235 bp

Definition

Oryza sativa Japonica Group Os07g0198300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:5345989..5350223

Sequence Coding Region

5346020..5346377,5347820..5347918,5349847..5350013

Expression

GEO Profiles:Os07g0198300

Genome Context

<gbrowseImage1> name=NC_008400:5345989..5350223 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:5345989..5350223 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcatcatcgtcatcggggagcggtggttctcgtggtggcggcggcggcgatggcgatggcgatgtcggcggtgaggggggatttcgcggcggacagggcggagtgcgcggacaagctgatggcgctgtcgacgtgcctgacgttcgtgcaggacggcgcgtcggggggcgcggcggcgccgacgccggactgctgctcggggctgaaggcggtgctggcggcgagccgcaagtgcctgtgcgtgctcatcaaggaccgcgacgacccaaacctcggcctcaagatcaacgtcaccaaggcgctctccctcccccagctctgcaacgcccccgccaacatctccgactgcccaaggctgttgaacttgccaccaaactccaaggacgcgcagatcttcgaacagttcgccaagcagcaggctgccatgcagggcagccccagtgcatcccctggtgggtcaagcgcaccggccgcgggcgcgcagaagagcggtgcggccgtgttgcggtggttgggagtggacggagttggtggcggcggcgcacgcgcggtggcgctcctcctcttcctcctctcctccgccgtcgccgtcgccgcgcctctcctgctcgtattctga</cdnaseq>

Protein Sequence

<aaseq>MEHHRHRGAVVLVVAAAAMAMAMSAVRGDFAADRAECADKLMAL STCLTFVQDGASGGAAAPTPDCCSGLKAVLAASRKCLCVLIKDRDDPNLGLKINVTKA LSLPQLCNAPANISDCPRLLNLPPNSKDAQIFEQFAKQQAAMQGSPSASPGGSSAPAA GAQKSGAAVLRWLGVDGVGGGGARAVALLLFLLSSAVAVAAPLLLVF</aaseq>

Gene Sequence

<dnaseqindica>32..389#1832..1930#3859..4025#ccctctctctctcgccctcgccgccatcaccatggagcatcatcgtcatcggggagcggtggttctcgtggtggcggcggcggcgatggcgatggcgatgtcggcggtgaggggggatttcgcggcggacagggcggagtgcgcggacaagctgatggcgctgtcgacgtgcctgacgttcgtgcaggacggcgcgtcggggggcgcggcggcgccgacgccggactgctgctcggggctgaaggcggtgctggcggcgagccgcaagtgcctgtgcgtgctcatcaaggaccgcgacgacccaaacctcggcctcaagatcaacgtcaccaaggcgctctccctcccccagctctgcaacgcccccgccaacatctccgactgcccaagtacgcacatcttcttcaacttctctttacccatctcttcgtgttctcaattctgaaaaaaacaaaaacaaattatgtttctcaattctggtcgtttatggttgtgccttgttttttttttctttctgtggtcagaattttcaaaatttcgatcttatctctcgttctgaacatcaaatatttacgactgaagagagagagagtgtgtgattgtatagttccttctttctgaaccatgtttctgatgatcaaacgcatggaattattaagtatatgtgttccttagttctctcgtattaatctctcacaatcttagttttttaactgtattatatgaatatctcaaagcactgaataaactgtcgtaattataagcaaaacggcgtcttcagggctcaggcacgcaatatattcatcgcacttaatttgttgtcttctatcatggcgatagcaacgcagcacaaaccatttcgtatttttcatgagcagccaaattagcagcctttgctcatgcgcggcggtcggtggatcggtccgtgacggcatccatcatgattgagatcgagatagtgtcaatgagtacattttaatcgaggtgtttggccacttagctatctactattaggcagctagctgaagagtctgactgggaccgagctagctcgactctttgcttggttcctagtgacaatggtggtagactggtagcaccgggttcactgaatcgttttgggttggattaccaccaccccacggtttgactgttaccacgagatatactgtggtttcaaaatctaagaaaggtcaccgtacggtttggttatcgccgcctgttatttttagctatttcatcggattattagaatagtggtggtagcactcgctgcccattatttatagctacttttttttagatttttatagtttgcttcaggtataaaagaaatatgttttattaaaaaaatcttttactatgttacaacagttgttataagctatttattaagtttgttttaaaaaaaaatcagtttatccttacaatcatgtagacaatccgttataagtaatcgtgaataatttgttcctatctttgctactcaattattcgtttatgattaaaaaaaccaaccagatagtgatgaacagtaacatatacaaaggggaaagtttatttatcctcgagggaacagatatacaatactaatcggaaagcttgaagtatgtagactgcaagttattttcgagatcggcatttttttttaagtttctggttaactgaagatttcatgtatgttgtagacttgtagtactagttaattaaacatttttacatgttccttgttgattgcccagagtgctttatcactggattagttggtattacaggtgtttcttttttgcaaattgaatgtaattgtggatggtaaattggcaatctgcagggctgttgaacttgccaccaaactccaaggacgcgcagatcttcgaacagttcgccaagcagcaggctgccatgcagggcagccccagtgcatcccctggtcagttcccatatttttttctctcctaatcctatactaactgatttattttacaattaataactgatatttggatccaaaattaaatatcaagattttcttttctgaagtatatatggccatgaaacctgatgttgtaacttgtcaatcagcggtagaagcactaattccaaaatagaaggagaagggtagtactgtagcagcaagtgacagagactcactgcgacatctgtagaaaattcattgactatcataagtaggtggcagtgcagccaaccaaatatcttttggagatttaactccccaagctgttgatgtgaacatgtcgattaagagcaagtataatagtgagcgataagtctactataagattaggtggaggagagaggtagtgaaaaattaaagatgttggctctcatacaagagctagcttatcacaagctctaagataaatacattaaatgtataagtgagagatatagagaggagaagaaaatcgtagccaatcttatagttaatctattatatatgttggctttaagataaactaatagtagaaagttggctatattattatccttgctctgaacaagatgccaaattaatttgatggaagctgaaaggaacgtactgttgcaataatagtggcctaacagtggctcatccgtcagcgtcatttagcttgagaggcgacatgcatgaaaaatcagtgtgccacgaccagcactattgcagtagtgccatgcctttttgatcattctgtttagcaacccgtgacggagatgatcgtggtgttttgcatcttgcaaagaccagccctttttaggccttctttgtagtggattttttttaaggaaattagcaacttcatctaaaattgtgcaaatttttatgttatgcaaggatcctagcttgttagtttatcagtcacaataaaaataaaaaattaaaaacttaaatctcaaagttgattttggtttacattgtagttttctttttaaatattttcatttttttctacaaatcctgagccactaataccactacacaggaagtttaacctataaattattactacgtctgaattatgcagtgggtgaacaaacctttagtcaccaaggtaattaatgttctagggggcaggatgtatgtacttactaaggagggttggacacaacatacttttagttgccaattacttggtggcaaattataaatagtcaccgatcaaccttggttattagatatttttagttaccaagtaccacttggttctaagaaatatatagttaccaatattttcttggtgactattgcttttacatattgttaccaactatggtaagtaatgatattatctttagcaaccgaggagatcacacgttggttacaaaatacatttagcaaccgggttgtagccaccaagatgcgaccaaagttcattggtagcgaaaactcaatagcaaccagcttgtagcttattgtcaccaaccaccttggtaactaatggtctgtttccttgtagtgtacctccgtcccataatatagcaacttagaatcatatgggacactacatagtactaacagcctagcatagttttctgttcagattcgttgtcgccatactatattgcatcacatcctgttcaaacggaagaaatttattattatcatattcatttctctacggctactgcggctttctttggacggcggagttagggtgtgtttagctcacgctaaaattgaaagtttggttaaaattggaacgatgtgatgaaaaggttaaaagtttatgtgtgtaggaaaattttgatgcgacggaaaagttagaaatttgaagaaatagtttggaactaaacaatgccttaattaactatccaatccttctaattcaagatgattaatttggtcttgtggttcctcaggtgggtcaagcgcaccggccgcgggcgcgcagaagagcggtgcggccgtgttgcggtggttgggagtggacggagttggtggcggcggcgcacgcgcggtggcgctcctcctcttcctcctctcctccgccgtcgccgtcgccgcgcctctcctgctcgtattctgaatttctgatggccacagcttaaaattagcgtgtaacacacaaacgactaaaagtctctaattaagagcagtgagtggtctttgccgttggaaaatttggaattgtagtatatctcatgatcagctagctctagtagctacgcgtgttgtgtgtgtggtctcgaacgactttataatctcagtgtgatattgatttgatatagttgtaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0198300, RefSeq:Os07g0198300