Os07g0200000

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Revision as of 08:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0200000| Description = Conserved hypothetical protein| Version = NM_001065662.1 GI:115471056 GeneID:4342659| Length = 7803 bp| Definition ...")
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Gene Name

Os07g0200000

Description

Conserved hypothetical protein

Version

NM_001065662.1 GI:115471056 GeneID:4342659

Length

7803 bp

Definition

Oryza sativa Japonica Group Os07g0200000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:5450922..5458724

Sequence Coding Region

5451246..5451408,5453401..5453534,5453608..5453796,5454313..5454825,5455815..5456856
,5457283..5457380,5458224..5458451

Expression

GEO Profiles:Os07g0200000

Genome Context

<gbrowseImage1> name=NC_008400:5450922..5458724 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:5450922..5458724 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcatcggccaagtcgtcgcggtcgaggccggccgggcattccggggtgttcccggtgagcggcgccgtggggggaggaggagggggcgggggcggtggcggaggaggaggaggaggaggaggcgatggcggggtgcagctcgccgacaagctcaagatcttcaagaccgacaacttcgatcccgacgcgtacgtgcagtccaagtgccagacgatgaacgagaaggagataaggcatttatgttcttacctgcaagatctaaagaaggcttcagctgaagagatgcgcagaagtgtatatgcaaattatgctgcatttatcagaacatcaaaggagatatcagatcttgaaggggaactgctatcaataagaaatctactgaatacacaagcagctttaatccatggtctttctgaaggagttcaaatagattccttgacttcaaacactgaaggttctgcagaagacgatatatccaatgttgaagaccaggaaccttcagaaatacaaaaatggtctgcagatttccctgacatgcttgatgttttgctagctgagagaagagtggatgaagcacttgatgcactagatgaagcggaacgacttgcttctgatgcaaaacttaaacagactctaaccgcaactgaaattgcagctttgagaagggcagtttctgataatcgtcagaagttggcagatcagcttgctgaagctgcttgtcagtcttctactcgtggcattgagcttcgtgctgcagcttctgctctcaaaaggcttggtgatggccctcgagctcacagcctgctactcaatgcacataatcaaaggcttcaatgtaatatgcaaactatacatccatctagcacttcgtatggtggggcgtacactgcagcacttgctcagcaagtcttttcagtggtagctcaggcactcagtgactctgtagaagtttttggtgatgagtcatgttatgcatctgaactggttacatgggctacgaagcaggttatgtcctttgcactcttggtaaagaggcatgtgttgtcctcttgtgcagctgctggaggtttgagagcagctgccgaatgtgttcagatatcacttggtcattgctccttgttggaagctcgtggtctgtctgttgcagctgttcttctgaggcaattcaggcccagtctagagcaagcattatattcaaacatcagaagaattgaagagagtaccgctgcactagctgcagctgatgactggattctcacatatcccccaactggcattcgtcctttagctagatcatctgctgctaatttggctcttcagccaaagctctccaacagtgctcatcgttttaactcgatggttcaggagttctttgaagatgttgcgccgctgcttagcttgcaattaggtggttctacaatggatgacataactaaaattttcaattcatatgtcaatttgctcataagtgctttacctgggtcaatggaagatgaagctaacatagatggtttaggaaataagattgttagaatggcagagtctgaagaacagcaactggctttattagccaatgcgtctttgctagctgaggagttgctacctagagcagctatgaagctatcatcaatgaaccattctagtatggatgatctgcgtaaaagaggctcagataaacagaaccgtatgcctgagcaacgtgaatggaaacggaaattacaacgcatggtggacagattaagggatagtttctgcaggcagcatgctcttgaacttatatttacagatgaaggtgagacccatctcagtgcagacatgtatattagcatggacaatactgttgaagagccagaatgggccccatctcttattttccaggagctgtatgcaaagctaaataggatggccagtattgcggcagatatgtttgtcggcagagaaagatttgctactctgctaatgatgcgactcactgagacagtcatactatggctctcagaggatcaagccttctgggaagagattgaacagggaccgaagcctttgggtccccttggccttcagcaattctacctggatatgcaatttgtaattatctttggacaaggtcgattcttgtctaggcacgtccatcaagtcatattggatattattgatagagcaatggctgcattttcagctactggaatgaaccctgacagtgtcctcccgggtgacgattggttcatggatgtttctcaggaggttgtcagcatgattagtggaaagggtagagctgccaatggagacagggagataaacagccctactgcctcagtctcagcgcattccatgtcatctttcagatcccatggcagctcctag</cdnaseq>

Protein Sequence

<aaseq>MASAKSSRSRPAGHSGVFPVSGAVGGGGGGGGGGGGGGGGGGDG GVQLADKLKIFKTDNFDPDAYVQSKCQTMNEKEIRHLCSYLQDLKKASAEEMRRSVYA NYAAFIRTSKEISDLEGELLSIRNLLNTQAALIHGLSEGVQIDSLTSNTEGSAEDDIS NVEDQEPSEIQKWSADFPDMLDVLLAERRVDEALDALDEAERLASDAKLKQTLTATEI AALRRAVSDNRQKLADQLAEAACQSSTRGIELRAAASALKRLGDGPRAHSLLLNAHNQ RLQCNMQTIHPSSTSYGGAYTAALAQQVFSVVAQALSDSVEVFGDESCYASELVTWAT KQVMSFALLVKRHVLSSCAAAGGLRAAAECVQISLGHCSLLEARGLSVAAVLLRQFRP SLEQALYSNIRRIEESTAALAAADDWILTYPPTGIRPLARSSAANLALQPKLSNSAHR FNSMVQEFFEDVAPLLSLQLGGSTMDDITKIFNSYVNLLISALPGSMEDEANIDGLGN KIVRMAESEEQQLALLANASLLAEELLPRAAMKLSSMNHSSMDDLRKRGSDKQNRMPE QREWKRKLQRMVDRLRDSFCRQHALELIFTDEGETHLSADMYISMDNTVEEPEWAPSL IFQELYAKLNRMASIAADMFVGRERFATLLMMRLTETVILWLSEDQAFWEEIEQGPKP LGPLGLQQFYLDMQFVIIFGQGRFLSRHVHQVILDIIDRAMAAFSATGMNPDSVLPGD DWFMDVSQEVVSMISGKGRAANGDREINSPTASVSAHSMSSFRSHGSS</aaseq>

Gene Sequence

<dnaseqindica>7317..7479#5191..5324#4929..5117#3900..4412#1869..2910#1345..1442#274..501#caccagcccaaaaaacaaacaaaaacaaataataaatctcgaaattaaaccaaaccaaaccatttccaacttccaaagccgcctcctccctctcctctcccaacccaaatcattcgtgcgattccgcggcctcgttggattgacgcggcaactaactccaccaccaccaccaccacctcccccaccaccggcggcggcggcggcggcggcgacgaggaggccccattgcgctcgcggaggcgtggtgttgacgggggaggcgctggatctcggatggcatcggccaagtcgtcgcggtcgaggccggccgggcattccggggtgttcccggtgagcggcgccgtggggggaggaggagggggcgggggcggtggcggaggaggaggaggaggaggaggcgatggcggggtgcagctcgccgacaagctcaagatcttcaagaccgacaacttcgatcccgacgcgtacgtgcagtccaagtgccagacgatgaacgagaaggtgagttgttgtcctctctgatccggccgtggttgagctcgcccctcgatccgtcctccgcctttcgttggatcccccggggggtggtgggattccgcgtgtgggttggcattttgcgcttgcgttgcgggggaggttggtatgatgtgatcctgaattcgatggaaggtaggagatgcatgatttgggaagaggggagggggggggggggggatgtgattggtgttgtaatataggcgaaatgggttgtaatgatgcaggttaatttcatccctggatgtttgactggtggttagagggctaaattgttaacaattgaggactttttgttgtttgtggtaatgcgaatttaaacctaattcaaaattgctgttcattttagtgatgaaatggttttcgctatctgtgagaatatgctagataacaacctcgtttctcgcttttgtcgattgactagtaccaagccagtctgatctcctttatacttacctcaaacaacgagtgaagtcgagatgttgatgagaaaggggcgagtctcaaggccaaagagtgctgtgctgattgctctggtggaatttttttatccattaattgccaagtactgttgttttgtcttgtgtaattgtattatccacgaaaactgaaaaccggaacatctggagttcaactatgcatttttatctgcaaatcggaataagaggttaagaaatgctttggtttgaatataacgccattttgaagaatgcagtataaagcaaattctatgtgttttagcttgactccagataggtcgtcaaagtgcctgcaaatgtaactgatcaaaacaattcaaatccatttcaggagataaggcatttatgttcttacctgcaagatctaaagaaggcttcagctgaagagatgcgcagaagtgtatatgcaaattatgctgcatttatcaggtatgtcaacaaccttaagagtgcactttccttagtattttgtgttagatacaatttttaaatagcctgatgtacccctggtataagctctaatagttctctatcacgtgaatacggtataatatttctaagtaaggcttatagctttggtgtcagaggcatggtgctgctgtgtatttttgtttgtttttctgatgtgtgagtttggttacaaaccaagaagtgggagtttcaggctgtgaactacttgtgacttagaatgctgtaacaatgtttagggtcttgtattcctaaaataagggactggttctttgccctttggttctaaaaaataatcattttttacccattctgttttcttccccttaacttagaatttatttgtttctacttatcttttgatactgatgatctcttggtcaccagaacatcaaaggagatatcagatcttgaaggggaactgctatcaataagaaatctactgaatacacaagcagctttaatccatggtctttctgaaggagttcaaatagattccttgacttcaaacactgaaggttctgcagaagacgatatatccaatgttgaagaccaggaaccttcagaaatacaaaaatggtctgcagatttccctgacatgcttgatgttttgctagctgagagaagagtggatgaagcacttgatgcactagatgaagcggaacgacttgcttctgatgcaaaacttaaacagactctaaccgcaactgaaattgcagctttgagaagggcagtttctgataatcgtcagaagttggcagatcagcttgctgaagctgcttgtcagtcttctactcgtggcattgagcttcgtgctgcagcttctgctctcaaaaggcttggtgatggccctcgagctcacagcctgctactcaatgcacataatcaaaggcttcaatgtaatatgcaaactatacatccatctagcacttcgtatggtggggcgtacactgcagcacttgctcagcaagtcttttcagtggtagctcaggcactcagtgactctgtagaagtttttggtgatgagtcatgttatgcatctgaactggttacatgggctacgaagcaggttatgtcctttgcactcttggtaaagaggcatgtgttgtcctcttgtgcagctgctggaggtttgagagcagctgccgaatgtgttcagatatcacttggtcattgctccttgttggaagctcgtggtctgtctgttgcagctgttcttctgaggcaattcaggcccagtctagagcaagcattatattcaaacatcagaagaattgaagagagtaccgctgcactagctgcagctgatgactggattctcacatatcccccaactggcattcgtcctttagctagatcatctgctgctaatttggctcttcagccaaagctctccaacagtgctcatcgttttaactcgatggttcaggtaatggttttatcccttatggttgaacaatactaattgatcttactatttttcttgttcagcaaagtgatggtgatatatctctatgagcttgtatctgcatcatttaattgcatgtatttgtttgctggactaggtttagtttgaaacagattattgagcagatcatctatttgattatatggataaatcaaatattctgataaataaccttaacaaataacttaaaacaagtagtctaagcaaatacaatagaagaattttctttgagaaaatgtaattttcaaagcttggagtaaataatctgtttcaacaatctggtaaataatctgcaaaaaactaaggctaaaaattaccatggccataatgtccttttcccaaaatcttaactctcaagcattcttcataactttagctccattatcagttccatgatgtagtaagatatgtgacttgtgcccatcggatcgtaggaaatatagcctttacaaatgagaacttatggaagagaaatcctgttggagcatagggatttcataggaatcctgttgggattgtattattccctgccgagttcgtgtggaattccttcattcgcaaaaccagtttcagactgttagggtgcagtactttcgatgattcatgattgaagaggacttctcaaggagattgacacacacctaggatttgctagtttgacttgacaccatcaatgataactatactaatttgtgtgagcttggggttgtttaattcaatggtttatttgtgctttcatgggttggaacttggaaaattggattagtcaggtgacaagttattcttaaaaataggcatttgcatctatacttatgcatataggagatatctaacatgaactacttccgttgcattcagcttcttttggagtgacgcttaaccagtatctttaccctttctggtgtaatatacactgtgtcctcaatcttggtattgcatgtaatttgcaggagttctttgaagatgttgcgccgctgcttagcttgcaattaggtggttctacaatggatgacataactaaaattttcaattcatatgtcaatttgctcataagtgctttacctgggtcaatggaagatgaagctaacatagatggtttaggaaataagattgttagaatggcagagtctgaagaacagcaactggctttattagccaatgcgtctttgctagctgaggagttgctacctagagcagctatgaagctatcatcaatgaaccattctagtatggatgatctgcgtaaaagaggctcagataaacagaaccgtatgcctgagcaacgtgaatggaaacggaaattacaacgcatggtggacagattaagggatagtttctgcaggcagcatgctcttgaacttatatttacagatgaaggtgagacccatctcagtgcagacatgtatattagcatggacaatactgttgaagagccagaatgggccccatctcttattttccaggtacaaacaaatgagaacttttcttttttttttctttttctttcctacatagattaacccaggtccttgtgaccaccttttgaacagcttgtttacatccatacgcttatcttttgccacataaatctttctgcttttagaatttgtccatgtatctcccaggagaaaaacgattactcacatgtgtattcacaatattctctgcttgaaacagcacctcagtgatgacgtgttaaattctagatttgagatgattttgatatcttctaccataattgcttggataagctcgtaatagtcttactcagttttgtggtgatataacaggacgatgttgtaattaaccaatggaattaaatggcatctttgtttgtgactgtcagttcatattattagatataagctgtactaaaatgttattcttcatgatgatggctctctgaatcaatgtagatattaggattctagaacttgcccaaaagtagtattttgtagctgatctgctattcattgcaggagctgtatgcaaagctaaataggatggccagtattgcggcagatatgtttgtcggcagagaaagatttgctactctgctaatgatgcgactcactgagacagtcatactatggctctcagaggatcaagccttctgggaagagattgaacagggaccgaagcctttgggtccccttggccttcagcaagtaaagctcctttcttcttcttctcctttcatgctatcagctgtgattttcatttttcatcccttatctgcagttctacctggatatgcaatttgtaattatctttggacaaggtcgattcttgtctaggcacgtccatcaagtcatattggatattattgatagagcaatggctgcattttcagctactggaatgaaccctgacaggtactacactattggttcagaagtaaatgctgctgcttgataattagttctgcgatttcagcaaaaatgctaattgctgattcatcactgcagttgcgtagaacaatagatgctctggtttattttgccttacaaagttcagattgcatcctaatgctctcgtagtcaaaatgatattagggatgaatgataaataaatagcctaatgctctttcccagtgaaaactatgaagaatgaaggatagatagataaccttttgtagttctgtccataccttctgcctttagtttctcttgatgtttattaggtagctatcattttatagttttgtccataccttctgtctttagtttctgtgcatggtctccctgtagctgctcccatgaagaactagggtttccacagcaatacttggtttgattagcacctaaattcctgcatagtttccaaaaaaaaaaacctgtcagggccaaatcgtttacctctttaaggatgggtgatacgcatggctttgactgtattgttatttgcaaatacattattgtgacgccccacactcttcgaggccgggccctctctagatctggcagctatcctaggatatagactatcctcacagaccaacacaagtctttcctgcacactttgtccttactcgtgcgcacccgggaagaatttcccgatcggtcacccatcccgaaattgctctagggcaagcacacttaacctcaaagtcttctttcgaaaccggcttccggaaaagaagttgcaacttgttgatatgagtattctattaatcctattcagccctgggccgggatatcacattctcccccccttgagataccgacgtcctcgtcggtcaacccaggccaggaacatcccctattagcaccacgtatatacagacaattttcggcgcacatacgtcatgtcatacgaccacatcgtggatcatcccgtatgcaccgtatgcccgcgtacatattcatatatacgtatagctgcaagggtcggctctgataccatctctgcacactttgtcctcactcgtgcgcacccgggaagaatttctcgatcggtcactcatcccgaaattgctccagggcaagcacgcttaacctcaaagttctttcgaaaccggcttccggaaaagaagttgcaacttgttgatatgagtattctattaatcttattcagccctgggccgggatatcacaattatttaaaatgaacaaaaccattttaccttcctcagctcttcctggagagtcaaaaaacacctacaggccacaattacaaaactgttcactttaaacccatcaagtatcaaaagtagtgagatggggtttggggacaagggcattaaaactgtttgttacaaaatagaattgcatattaagcaaattttatctaatattttggaatccaaacaaagttctccgctgctaagattctgcatagcagttatcatgctgaaaaatgattaaattgcacttttgctccttgaacttttttttttgagaacttgctccttgaacttgaaagctacgtgtccacataactcaacatttgttgacacatagaccagtgatgtatcacaaaggcacaaaccatacggctatctgtaggcaatgttttactcacgttgacggatgtaggaatccagtaatttgtagggaattattttgtgaaaatatagctgtttgacttataagtcttttatgccatctatgtcaactttattcttaagtcttaacttgtacttcatacttacatagtaaccaggctgcctcctaggctcctagttcctttactgcagtaatactacaaaaccatgtttggatcgcctcgcatgtcctcttggaagtcaattgcctgtgatattgggttacttttttttctctgtagcagggtcctcaaagaagctgcttctacagggagtgtggacatgcaaatctgaactaacatttttctgcatctttgtgcagtgtcctcccgggtgacgattggttcatggatgtttctcaggaggttgtcagcatgattagtggaaagggtagagctgccaatggagacagggagataaacagccctactgcctcagtctcagcgcattccatgtcatctttcagatcccatggcagctcctagcttgtaagctatactttttgtaggcagatcatcattgtataataagcaatagtgcattctttctttctttttctcccacatttctcagttttctctgtctatttcttttgttctattcatttccttctgttgtgctagtacaggtggataactgtttgacgtaggaaaaaaaatcttgaattattttcttccctgagctaaggcctgtaagtgttgcttacttgcatggccagtatatgtcgcgagctttgtatcattctttcagatgttttttttatgtcacctggcacatcgcattcatgaattcaggattcgttactttcg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0200000, RefSeq:Os07g0200000