Os09g0455200

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Revision as of 07:27, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0455200| Description = Winged helix repressor DNA-binding domain containing protein| Version = NM_001069891.2 GI:297609580 GeneID:4347251| ...")
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Gene Name

Os09g0455200

Description

Winged helix repressor DNA-binding domain containing protein

Version

NM_001069891.2 GI:297609580 GeneID:4347251

Length

1771 bp

Definition

Oryza sativa Japonica Group Os09g0455200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17763000..17764770

Sequence Coding Region

17763386..17764318,17764407..17764658

Expression

GEO Profiles:Os09g0455200

Genome Context

<gbrowseImage1> name=NC_008402:17763000..17764770 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:17763000..17764770 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcggtgcgggagctggtcggactgcgaggcggcggcggcggcggcgcagaaggcggtgccggcgccgttcttgaccaagacgtatcagctggtggatgacccggccactgaccacatcgtctcgtggggggacgaccgggtgtccaccttcgtcgtgtggcggccgccggagttcgcgcgcgacatcctccccaactacttcaagcacaacaacttctcgtcgttcgtccgccagctcaacacctacgggttcaggaaggtcgtgccggagaggtgggagttcgcgaacgagttcttcaggaagggggagaagcagctgctcaccgagatccaccgcaggaagacgtcgtccgcatcgacggcgtcgccgtctccgccgccgttcttcgcgccgccgcacttccctctgttccaccaccccggcgtcgcggcggctcagcaccaccacgcgttcgtcggcgacgacggggttgtggcggcgcatggcatcggcatgccgttcccgcagccgcattggcgggagccgaacttgccggtcgcgacgcgcctgctcgcgctaggcgggcccgcgccgtcgccgtcgtcggcggaggccggcggcgccgggcgcgccgccaccgccgcggtgctgatggaggagaacgagcgcctgcggcggagcaacacggcgctgctgcaggagcttgcgcacatgcgcaagctgtacaacgacatcatctacttcgtgcagaaccacgttcgtcccgtggcgccgagcccggcggcggccgcgttcctgcagggcctcggcatgcaggcgcgcaagaagcccgccgccgccaacgtgctcaacaactcaggcgggagcacaacgtcgagcagctcgctcaccatcgccgaggagccttcccctccgccgcagcagcagcatctagccggcgagaagagcggcggggaggcaggcaacagcagcgccgctcggtcatcggcgccgaccaagctcttcggcgtgcacctaagcgccgccccgtgcggcgccggcagcaagagagcgtcttcgccggaggagcacccgcccacgtcgccggccacgaagcctcgcctcgtgctggagtgcgacgacctaagcctgaccgtcgcgccgtcgtcgtcgtcgcagcagcagctgtcagccgcctcttctccaacaagcaccagctag</cdnaseq>

Protein Sequence

<aaseq>MERCGSWSDCEAAAAAAQKAVPAPFLTKTYQLVDDPATDHIVSW GDDRVSTFVVWRPPEFARDILPNYFKHNNFSSFVRQLNTYGFRKVVPERWEFANEFFR KGEKQLLTEIHRRKTSSASTASPSPPPFFAPPHFPLFHHPGVAAAQHHHAFVGDDGVV AAHGIGMPFPQPHWREPNLPVATRLLALGGPAPSPSSAEAGGAGRAATAAVLMEENER LRRSNTALLQELAHMRKLYNDIIYFVQNHVRPVAPSPAAAAFLQGLGMQARKKPAAAN VLNNSGGSTTSSSSLTIAEEPSPPPQQQHLAGEKSGGEAGNSSAARSSAPTKLFGVHL SAAPCGAGSKRASSPEEHPPTSPATKPRLVLECDDLSLTVAPSSSSQQQLSAASSPTS TS</aaseq>

Gene Sequence

<dnaseqindica>453..1385#113..364#ggccactcgtaaaccccgagaaaccttggcggcttggccgactcctcgtctctccggttgatactgttgtggagtagtgtagtggtagcgagctcgtagatcttcttggtagatggagcggtgcgggagctggtcggactgcgaggcggcggcggcggcggcgcagaaggcggtgccggcgccgttcttgaccaagacgtatcagctggtggatgacccggccactgaccacatcgtctcgtggggggacgaccgggtgtccaccttcgtcgtgtggcggccgccggagttcgcgcgcgacatcctccccaactacttcaagcacaacaacttctcgtcgttcgtccgccagctcaacacctacgtaagcaaagcgccatgccgccaccttctgtagttctgttctctcgtgcgttttgatgcgtgtaagtaacgacgtcgttgcaatgcaggggttcaggaaggtcgtgccggagaggtgggagttcgcgaacgagttcttcaggaagggggagaagcagctgctcaccgagatccaccgcaggaagacgtcgtccgcatcgacggcgtcgccgtctccgccgccgttcttcgcgccgccgcacttccctctgttccaccaccccggcgtcgcggcggctcagcaccaccacgcgttcgtcggcgacgacggggttgtggcggcgcatggcatcggcatgccgttcccgcagccgcattggcgggagccgaacttgccggtcgcgacgcgcctgctcgcgctaggcgggcccgcgccgtcgccgtcgtcggcggaggccggcggcgccgggcgcgccgccaccgccgcggtgctgatggaggagaacgagcgcctgcggcggagcaacacggcgctgctgcaggagcttgcgcacatgcgcaagctgtacaacgacatcatctacttcgtgcagaaccacgttcgtcccgtggcgccgagcccggcggcggccgcgttcctgcagggcctcggcatgcaggcgcgcaagaagcccgccgccgccaacgtgctcaacaactcaggcgggagcacaacgtcgagcagctcgctcaccatcgccgaggagccttcccctccgccgcagcagcagcatctagccggcgagaagagcggcggggaggcaggcaacagcagcgccgctcggtcatcggcgccgaccaagctcttcggcgtgcacctaagcgccgccccgtgcggcgccggcagcaagagagcgtcttcgccggaggagcacccgcccacgtcgccggccacgaagcctcgcctcgtgctggagtgcgacgacctaagcctgaccgtcgcgccgtcgtcgtcgtcgcagcagcagctgtcagccgcctcttctccaacaagcaccagctagtcaagtcagcacgcatgcaaacgccaacgcgactccatgcaacgacgacgaccattttgctgttctaatccgacgcgtttagcttcctagttagctcacctcttctgttctcgcggtcaaggttagggttctaattccgcagcggtgcaaaagcccaagtgggttaaaccttggtgcaagccaccgtgtgcccaactaatcgaacaagcaaatcaggttttctgtacagatgtaacgcagcgtcgccactaccaccacataacgtacatactcggtactggagtatagtacggtgcgtagcagcagccgagaggctgacccctggaccgtgataatgcttcaagaatccaacgatcttttggacgacaagtccggaaagggaagcc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0455200, RefSeq:Os09g0455200