Os07g0203300

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Revision as of 08:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0203300| Description = Nucleic acid-binding, OB-fold domain containing protein| Version = NM_001065674.1 GI:115471080 GeneID:4342673| Lengt...")
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Gene Name

Os07g0203300

Description

Nucleic acid-binding, OB-fold domain containing protein

Version

NM_001065674.1 GI:115471080 GeneID:4342673

Length

4599 bp

Definition

Oryza sativa Japonica Group Os07g0203300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:5584687..5589285

Sequence Coding Region

5584687..5585078,5585427..5585487,5585874..5586019,5586104..5586287,5586363..5586459
,5586601..5586931,5587023..5587199,5587571..5587667,5587742..5587897
,5587962..5588198,5588271..5588354,5588791..5588898

Expression

GEO Profiles:Os07g0203300

Genome Context

<gbrowseImage1> name=NC_008400:5584687..5589285 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:5584687..5589285 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ggtgtgaacagggagaaacggttgttgagactgaaagcacttgacagtcagagtttgccagagaatataggcgaaacacaaaaaccactctctgctactgttgaacatacaaaacaaggagatatcattggtggacgtattcaaaagattctacctggtgttggtgggcttgtcatccagattggacctcatcttcatggaagggttcattatactgaaattgttgattcatgggtgcaagaacccatatctggatttcatgaaggtcagtttgtgaagtgtaaggtcctggatgtaagccgttcatcagaagggtctgtcagagttgatctatcacttcgctcatcaatgtgcgcaaattctaaccagtcaagaagattgtttgatgattcgagaattcgtacctcccgatttgagaagatcaatgacctgtgcccgggaacagaggttaagggctatgtgaagagcgtgaattcgaaaggatgtttcattatggtttctcggactattgaggctaggattattctgtcaaatttatctgatgaatatgtggaaaatcctcaaaacgatttcccagttggactgcttgtacatggaagggtcttgtcctcagaaccacaatcagggaaagttgaggtatcacttaggaagaatactggtagcaaatctcaaaaatcagatgatattagttacagcgatctgcatgttggggacataattgctggtcaagttaagagggtagaatcctttggactatttgtgacaattcagggcagtgaattggtggcattgtgccatgtatcagaactttctgatgaaccagtccttgatattcattcttgccacaaagctggtgataaggttaaagccaaaattttgaagattgatgaggaacggcatcgagtatccattggaatgaagaaatcttacatcggacctgattctacgggtgatacaagtgatgatgaggatgacgaaatagttcctgaggaaatcagtcgtaatcctgtgatgggtagagatcggaaccatgcgttagttcttccgaaaccagaatccagggcttcagtgctgccactccaggtctccttggatgaatctgaaggttcagaccaagagaatgataataaaggtcaagaaattgctaatggaactgaagtagatgataaaaagagcaacaaaaggttgaaggagaaggcgagaaaacaaagagaattagaaatcagtgccttggaggaaagggctttacaaagagatataccccagactccagatgaattcgagaagttggttaggagctctccaaacagtagcttcgtctggataaactacatggcatttttgttagacctagcagatgttgataaggcccgtgcagtggcggaaagggctttgagaacaataaacatcagagaagaggaggagaaacttaatgtttgggtagcatattttaatctggaaaatgaatatggcagtccaagggaggatgctgtcaagaagatattccaaagagccttgcagtattgtgatcccaaaaaggtgcacttggctcttcttgcaatgtatgagaggacagaacaatacacactagcagatgaacttcttgatagaatgacgaagagattcaaaacttcctgcaagatttggttgcgctgtattcaattgtccctcaagcaaagcaaggatgttgagtgcatcaaattgatagtgaagcgtgcacttctaagtctacctcagagcaagcgtagaaagttcctatcgcagactgctatcctggagttcaagtgtggagtgcctgaggaagggagatccagatttgaactgatcttaagagagtaccctaaaagaacagatctttggagtgtttacctagaccaagaaattcgccttggtgatacggaaattatacgggcattatttgagagagtaacatgccttagtcttcctccaaaaaagatgaagtttttattcaagaagtacctggaatatgagaagtcgcaaggtgatgaggaaagaatcgagcatgtaaagcagaaggcactggagtacgttcagagttcactggcctga</cdnaseq>

Protein Sequence

<aaseq>GVNREKRLLRLKALDSQSLPENIGETQKPLSATVEHTKQGDIIG GRIQKILPGVGGLVIQIGPHLHGRVHYTEIVDSWVQEPISGFHEGQFVKCKVLDVSRS SEGSVRVDLSLRSSMCANSNQSRRLFDDSRIRTSRFEKINDLCPGTEVKGYVKSVNSK GCFIMVSRTIEARIILSNLSDEYVENPQNDFPVGLLVHGRVLSSEPQSGKVEVSLRKN TGSKSQKSDDISYSDLHVGDIIAGQVKRVESFGLFVTIQGSELVALCHVSELSDEPVL DIHSCHKAGDKVKAKILKIDEERHRVSIGMKKSYIGPDSTGDTSDDEDDEIVPEEISR NPVMGRDRNHALVLPKPESRASVLPLQVSLDESEGSDQENDNKGQEIANGTEVDDKKS NKRLKEKARKQRELEISALEERALQRDIPQTPDEFEKLVRSSPNSSFVWINYMAFLLD LADVDKARAVAERALRTINIREEEEKLNVWVAYFNLENEYGSPREDAVKKIFQRALQY CDPKKVHLALLAMYERTEQYTLADELLDRMTKRFKTSCKIWLRCIQLSLKQSKDVECI KLIVKRALLSLPQSKRRKFLSQTAILEFKCGVPEEGRSRFELILREYPKRTDLWSVYL DQEIRLGDTEIIRALFERVTCLSLPPKKMKFLFKKYLEYEKSQGDEERIEHVKQKALE YVQSSLA</aaseq>

Gene Sequence

<dnaseqindica>1..392#741..801#1188..1333#1418..1601#1677..1773#1915..2245#2337..2513#2885..2981#3056..3211#3276..3512#3585..3668#4105..4212#ggtgtgaacagggagaaacggttgttgagactgaaagcacttgacagtcagagtttgccagagaatataggcgaaacacaaaaaccactctctgctactgttgaacatacaaaacaaggagatatcattggtggacgtattcaaaagattctacctggtgttggtgggcttgtcatccagattggacctcatcttcatggaagggttcattatactgaaattgttgattcatgggtgcaagaacccatatctggatttcatgaaggtcagtttgtgaagtgtaaggtcctggatgtaagccgttcatcagaagggtctgtcagagttgatctatcacttcgctcatcaatgtgcgcaaattctaaccagtcaagaagattgtttgatgattcgtaagtgctagattgtgaatgtatttgtttatttataagaaattgacaagcagacttttcatttatgcttaatatctctcttttgctgaaattcacatgtcttaatatcaagggtttccaaacataccttaatatcaagggttaattggatccatggcattacacgcagtcacgcactattgctgcctggtgacaactatcattttggatggggggagttgtgtatcttatggaaacaaaatcccaacccactcttgcatattttaagcaggcctgatcattggacagtttaggttttttagaatgtatcatacctactaatgtatgtttaacatatctgttttgcaggagaattcgtacctcccgatttgagaagatcaatgacctgtgcccgggaacagaggttaaggtattttcttaccttattttgaataactagattttgttcgaaaaatttgtatgatgagctcaaagtagtgtgcaaaggcacatggttgatcatcctgttgctctaaaaatataagtctgtattttgcctttattcattgaaaagctgtaaacagtttttgaactttatgtaagatgtattttccaacttacttggcatgtattcagtaataatccacaaataattactggatattaactacattttttttagacttaaaaacttcagtgtggaaacagtttccagtgttgtatgctgaaagaatgtagtgattgttattttcttttacattttagcatagatgtatcttctatatggagtaatgtgctgcgtggtaatattcatagggctatgtgaagagcgtgaattcgaaaggatgtttcattatggtttctcggactattgaggctaggattattctgtcaaatttatctgatgaatatgtggaaaatcctcaaaacgatttcccagttggactgcttgtacatggaaggtgagatctggtcatttacaaattttatatagaacttaatagtgttgtcttgaatctttttttttttttaaaaaaaaaatgcagggtcttgtcctcagaaccacaatcagggaaagttgaggtatcacttaggaagaatactggtagcaaatctcaaaaatcagatgatattagttacagcgatctgcatgttggggacataattgctggtcaagttaagagggtagaatcctttggactatttgtgacaattcagggcagtgaattggtatgtgctgtcttttttgagaccacacacaaatgttgtttgaaatcagtaccttatatggatctttgcttgtaggtggcattgtgccatgtatcagaactttctgatgaaccagtccttgatattcattcttgccacaaagctggtgataaggttaaagccaaaattttgaaggcaagttttgtcctttgttttggacaacgggctagttacctgctgcatttgatggctttgcaaaatttacctcttatcataatagtattctgccttctgtattgccattttaaaattcgttctgctcttttttgcatgtagattgatgaggaacggcatcgagtatccattggaatgaagaaatcttacatcggacctgattctacgggtgatacaagtgatgatgaggatgacgaaatagttcctgaggaaatcagtcgtaatcctgtgatgggtagagatcggaaccatgcgttagttcttccgaaaccagaatccagggcttcagtgctgccactccaggtctccttggatgaatctgaaggttcagaccaagagaatgataataaaggtcaagaaattgctaatggaactgaagtagatgataaaaagagcaacaaaaggttgaaggagaaggcgagaaaacaaaggttgtcatatgtttatctatatcttttaatttccacaaaccttcggacttaaagactccagacttttacatccttgtatttgttatttcagagaattagaaatcagtgccttggaggaaagggctttacaaagagatataccccagactccagatgaattcgagaagttggttaggagctctccaaacagtagcttcgtctggataaactacatggcatttttgttagacctagcagatgttgataaggcccgtgcagtggcggaaaggttcgttcgcaatctgggaactactgttgtcaatattgttttgaataatgtgattggatatacaaaatttggctaaatgttttggacttctaaattattttgtgtagaaaatttttttctcaaatgaattatttccgaagtttctgttaacactgctaagtggaacttcaatgttttctgagatatatttctatccaaattttatttcctgatgaagcttcaattatttttccctgaaaaaaattccacttgccaccatttctcctgagaagaggtgcaacatttttttcccttcctgaaacttttatttgaaccttttatgctgttttgtatgaatgttttcatcttatggtattgttgaatttcattagggctttgagaacaataaacatcagagaagaggaggagaaacttaatgtttgggtagcatattttaatctggaaaatgaatatggcagtccaagggaggtaatgctcaaaatgatactatttattctcttgtgccattttgactatactgatttattgttgatatatgtcaggatgctgtcaagaagatattccaaagagccttgcagtattgtgatcccaaaaaggtgcacttggctcttcttgcaatgtatgagaggacagaacaatacacactagcagatgaacttcttgatagaatgacgaagagattcaaaacttcctgcaaggttagtgtgctgctttcctaaattcttgtctggagcaaatttttgacttgtggtataactgtagatttggttgcgctgtattcaattgtccctcaagcaaagcaaggatgttgagtgcatcaaattgatagtgaagcgtgcacttctaagtctacctcagagcaagcgtagaaagttcctatcgcagactgctatcctggagttcaagtgtggagtgcctgaggaagggagatccagatttgaactgatcttaagagagtaccctaaaagaacagatctttggagtgtttacctagaccaagtaatcaaacatttgtaaactgttatcttgaagaattatacaatttgattgacaagctttgatctcttgtaggaaattcgccttggtgatacggaaattatacgggcattatttgagagagtaacatgccttagtcttcctccaaaaaagatgaaggtttggcttaatctcaatggtttttttttatgttcggatatacctaatctcaatggtttttttatgttcagatatatttgattcctagaaaaatacagtttgtttctgagaaatgtaatccagagctgagtggtacaggcttggtttaattaatcgggtggagcagttaactgtagcacatcggttactgatttgtttctttttccttgtttctttttccctcataagaaggttttcctgaattacttgtttattggctaaccaaccttatatttatacatcaagaattttcgtggtcatgcttggcatttatataggttatttccttgtcagattcccaaacatgtctctttactagcattctttttataatctaatataatttttataatctaatataatgttagattcctcatactatgctcaacttccgcagtttttattcaagaagtacctggaatatgagaagtcgcaaggtgatgaggaaagaatcgagcatgtaaagcagaaggcactggagtacgttcagagttcactggcctgatattcgcaagaccaataatccctctgaacctaagctgttgctgctgctatccgctattcggagtcgtggctgcagaaattgcgatcagcaacctgatgcgacgactcctgataggtttctgcgaggatcggcggtgtaactgtctgaatagctgaaggtcaagtccttggtcgatgcagaaactgaagagtgctaatcatagaaacggtgataggtctgatgtattttgtgcgttagtgctatggttgcatatttttgattagtgatgcgaacacgaacgttgttaagagggaaatgcagcccattcagttttgtaggaataagtgttctacgcttggaattgtcaaaagtttttaccaaaatatgatgtatacaaaccttttctta</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0203300, RefSeq:Os07g0203300