Os07g0205900

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Revision as of 08:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0205900| Description = Armadillo-like helical domain containing protein| Version = NM_001065685.1 GI:115471102 GeneID:4342686| Length = 850...")
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Gene Name

Os07g0205900

Description

Armadillo-like helical domain containing protein

Version

NM_001065685.1 GI:115471102 GeneID:4342686

Length

8502 bp

Definition

Oryza sativa Japonica Group Os07g0205900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:5734938..5743439

Sequence Coding Region

5735420..5735593,5735735..5735953,5736410..5736532,5736602..5736739,5736852..5737052
,5737859..5737986,5738114..5738189,5738354..5738503,5738594..5739115
,5739208..5739357,5739559..5739845,5739936..5740132,5740223..5740440
,5740890..5740937,5741589..5741717,5741821..5741935,5742044..5742159
,5742341..5742415,5742562..5742696

Expression

GEO Profiles:Os07g0205900

Genome Context

<gbrowseImage1> name=NC_008400:5734938..5743439 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:5734938..5743439 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgtgatatctcggaaggtcctgccggcgtgcgggagcctctgctatttctgccccgggttgagggcaagatcaaggcagcctgttaagaggtacaagtcgatccttgctgagatcttccccaaaacgcaggatgaagaaccgaatgagagaaggatcgggaagttgtgcgagtattgctcgaggaaccctctccgagtgcccaagatcacggtttccttggagcaaaggatctacaaggaattgagaagtgaacagtatggctttgcaaaagtggtgatgctaatataccgtagattgttggtttcttgtaaagagcagatgccactatttgcaagtagcttattaagtattgtacacactcttttagatcaaaagaggcaggatgatatgcgcatcataggatgtgaaaccttgtttgactttgcagttaatcaggtggatggtacatatcagttcaatttggaagggctagtcccaagactatgtgagctatctcaagaagtaggagaggatgagcagaccattgccctacgcgctgcagccctgcaagccctttcagctatgatttggttcatgggagagctctcacatatttcatcggaattcgataatgtggttcaagtagtacttgaaaactaccgacctcagaagatgcaaaatgatggtcaagttaccaaggattcaagcgaccagttggagcaagaagcccccaaaacggaggactccaaagcagaggactccaaaacggaggactcttccccctttgtcatctctgctgtccccttgtgggagaacatagttaatgttaagggtggagttaaccttactgtggaggaagcaaaggatcctaagttttggtccagaatatgtgtgcacaatatggctaggctttccagggaggcaacaacattccgtcgtatcctggagtctttgtttcggtacttcggcaacaacagttcatggtcacctgaaaatggacttgctctgtgtgtattgttggacatgcaactgttagtggaaaacgcaggacaaaacatgcacttaatgttgtctctactgataaagcatattgaacacaagaccatggtgaagcaacaggagatgcagcttagtatcgtggaggtagcagccaccctagcagaacaatccatcgctcaggcttcagcagcaactataggtgccataagtgatcttgtcaggcatttgaaaaggacatttcatattactctcggcagcaaagattcggagctagtaaaatggaatgaaaagttccgaaaggctatagatgattgtctaggacagctggcaaagaaggtaactgatgctggaccagttctggacatgatggccgtgatgctagaaaatattgctagcactcctgttgtagctagatcaactgcagctgctgtttatcgtacagctcaaataattgcttctgttccaaatattacctatcagaataaggtgtttccagaagctctgtttcatcagttgctcttaacgatgatccaccctgatcatgaagctcgagtagctgcgcaccgcattttcgctattgtcttggtcccctcttccgttgccccctcgattcaagcaagtgtatcaggtcaggctaagaaacatgacatgcagaggacactctctagggctgtctcggtgttttcatcttcagctgccatctttgacaagttgaaaaaggacaagcactcagacaactcacaaggtgatagcagtggcttgcatagtatcagtgaagagtctagtaatgccaaacgttcgaacctacctgtgtctcaaagtcgccgacgtagcatgaaaattcctaatttttccatgaagaggggtccttcaatggctatgagagctccttcagtagccctgagagccccttccatatctctcagagttacttcgatgtctttgagagcaccttccatgtctataaaggcagaccatggttcctcaagccatccagaagatgaaatggaatcagttttgctgaagctgagcagtcgccagatcacacttttgctttcatccatttgggctcaagcaacatctcctgaaaatactccagcaaactatgaagccattgctcacacttatagtttgcttctattgttctctggagccaaggcatcagtttttgaggctcttactcagagttttcaggttgcattttcactgaggggctattcactgactgaaccagattcattaccaccatgtcggcgccgttccttgtttactcttgctacagctatgatcattttctcttcaagaactttcaacgtgttacctcttattccaatatgtaaacaaatgctgaatgagagaacaggtgatccattcctccgtttggtggatgagtgcaagcttcaggctgtgaaagattccgtggatgatccgtcgaaaatctacggatcaccagaggataatactaacgcactgaagtccctttcagcgatagaactatcagagagtcaatcccgagaatgcattgtctccacaatcatgaacaacataacaaatatgctagaggcggagttgaatagtgtgaagaatcaactgctaagcgatttctctcccgatgacatgtgtccaacaagcactcatttttttgaagcaactggtgataactcatcaccaggatctcatgataatgatcaccatccagaggctgtgctgatcgacctgggaaatgaccacgatatctttggggaagcttcagaaagtacagctgcttctgcaaatgctgtgcctgtaacagatcttctgagtatcgatcagcttcttgaaacagttgtcacagacccggcacctcatacagaacgagtgtctgtatcaacagacatgccattcaaggagatgagtagccaatgcgaagccctcactgtcaggaaacatcagaaaatggcctccttcatgagcttctcgcaggatatgacaatggatcccatggcaaccaatcagccgttccagacggatttgtcccttttccatgacccatatccgcctcaggttggggtgccgaacacgaatccgttcgtcgacgataacctgtatggttacccccagtacatgaacatgaacgaagccaatccacagccaacttatgagcaagcccagcaacatttcctgaggttgccggcatcaagtccatacgacaattttcgcagggctgctggttgttag</cdnaseq>

Protein Sequence

<aaseq>MGVISRKVLPACGSLCYFCPGLRARSRQPVKRYKSILAEIFPKT QDEEPNERRIGKLCEYCSRNPLRVPKITVSLEQRIYKELRSEQYGFAKVVMLIYRRLL VSCKEQMPLFASSLLSIVHTLLDQKRQDDMRIIGCETLFDFAVNQVDGTYQFNLEGLV PRLCELSQEVGEDEQTIALRAAALQALSAMIWFMGELSHISSEFDNVVQVVLENYRPQ KMQNDGQVTKDSSDQLEQEAPKTEDSKAEDSKTEDSSPFVISAVPLWENIVNVKGGVN LTVEEAKDPKFWSRICVHNMARLSREATTFRRILESLFRYFGNNSSWSPENGLALCVL LDMQLLVENAGQNMHLMLSLLIKHIEHKTMVKQQEMQLSIVEVAATLAEQSIAQASAA TIGAISDLVRHLKRTFHITLGSKDSELVKWNEKFRKAIDDCLGQLAKKVTDAGPVLDM MAVMLENIASTPVVARSTAAAVYRTAQIIASVPNITYQNKVFPEALFHQLLLTMIHPD HEARVAAHRIFAIVLVPSSVAPSIQASVSGQAKKHDMQRTLSRAVSVFSSSAAIFDKL KKDKHSDNSQGDSSGLHSISEESSNAKRSNLPVSQSRRRSMKIPNFSMKRGPSMAMRA PSVALRAPSISLRVTSMSLRAPSMSIKADHGSSSHPEDEMESVLLKLSSRQITLLLSS IWAQATSPENTPANYEAIAHTYSLLLLFSGAKASVFEALTQSFQVAFSLRGYSLTEPD SLPPCRRRSLFTLATAMIIFSSRTFNVLPLIPICKQMLNERTGDPFLRLVDECKLQAV KDSVDDPSKIYGSPEDNTNALKSLSAIELSESQSRECIVSTIMNNITNMLEAELNSVK NQLLSDFSPDDMCPTSTHFFEATGDNSSPGSHDNDHHPEAVLIDLGNDHDIFGEASES TAASANAVPVTDLLSIDQLLETVVTDPAPHTERVSVSTDMPFKEMSSQCEALTVRKHQ KMASFMSFSQDMTMDPMATNQPFQTDLSLFHDPYPPQVGVPNTNPFVDDNLYGYPQYM NMNEANPQPTYEQAQQHFLRLPASSPYDNFRRAAGC</aaseq>

Gene Sequence

<dnaseqindica>7847..8020#7487..7705#6908..7030#6701..6838#6388..6588#5454..5581#5251..5326#4937..5086#4325..4846#4083..4232#3595..3881#3308..3504#3000..3217#2503..2550#1723..1851#1505..1619#1281..1396#1025..1099#744..878#ccccgcgtctcctctcctccccacccgccccgcatctctccatcggccggatcggcaggagagcgcggccgtacgcacgtacgccgtccccgcggtttcttcccccccggcgcccagcccgcccgccgggcggcggcctctcctagcaacgtaacctcctttgccctcctccatcgatcgatctatcgatctccttccatagcgttttaattaaattatgtttgattggtcgagagattggggttcgaaccattgcttctgttgttgcaggttgccgctcgatttttttttgtttttcttttcttaaagtgcctgcattatacatttgctaagttttatattgatataatatgaaaaataatttttacaagattgcagccatggaaggctgtaaccatgaaagaaaaacaaacaaacacgcaacctaggagaaggtctagcaccaagccagccgccgctaagcgagatcgaacgccgctagaattttttttgttttcgttttgatttgatttccgttagaaatggcattccccccaaaatttatgaatttcgcctgctcggttttaacttgccaacaacaattattaatgtatcttgctttggagaaaattcgtagctagatagtgcatattggaggtggaatcccttgatttgatcgccattgttgtgtttgcaattattctaattagcttttttttttgttttttgctctgctaaatcaattctgcttacagtagtaggggatgggcgtgatatctcggaaggtcctgccggcgtgcgggagcctctgctatttctgccccgggttgagggcaagatcaaggcagcctgttaagaggtacaagtcgatccttgctgagatcttccccaaaacgcaggtaggttgggccccttgctgcatcccccatctctgtcttgtttgtttgttctgttcatgtgtggaagccgcattatcggactaatcgatgctccgcagcttagctaatttacttgttgttgctgctcgtatgttatcatgatgtaggatgaagaaccgaatgagagaaggatcgggaagttgtgcgagtattgctcgaggaaccctctccgagtgcccaaggttcacgccctctaccttcttgtggagctaaaaatgtttctgtcaatagtcagattgttcctgtcatgctcttgttgttgttagtcatgtattgattgacacaaattcacctcaatcttttctcaagaaaatttcaagctcagttgactccatttttttttccaaattgatgtatgagcagatcacggtttccttggagcaaaggatctacaaggaattgagaagtgaacagtatggctttgcaaaagtggtgatgctaatataccgtagattgttggtttcttgtaaagagcagatgtgagagtcttctttttccccttgttttgcccttttcctttaacgagttgtaacatgctggttctattcatcagatgttaatactatcatttggtttgctcaatgcaggccactatttgcaagtagcttattaagtattgtacacactcttttagatcaaaagaggcaggatgatatgcgcatcataggatgtgaaaccttgtttgactttgcagttaatcaggtatttccgttgcctggtgatcagtgataccattcctcaccagcagaattcttttgaaagacatgatgtatctggttcatgcttttatttccgtctattttaggtggatggtacatatcagttcaatttggaagggctagtcccaagactatgtgagctatctcaagaagtaggagaggatgagcagaccattgccctacgcgctgcagccctgcaagccctttcagctatggtaaactttactgttaagccatatcaaactttcgtcatatgcttcaacctattgttaaaatgaagaacgaatgagtaggaaggaaaacaaaagtatgggaatactgttaccagaagagattcaaatcatacttcacatataacatgtctagcactgattgcaaaaatggtgaagaagtgactaggaaggtaaaaaatgtccaactactgtgtcagaagagattcaaattacacttcacttctaagcaaacactaacacgtatgctgcaaaacacattagtttgcatctgaggtttcttgcattcctacgtgacgaatgggagctcataatcattaagcattaagtactaactacatatattattactatcaacttacttccaggaactattttgcaacataacttctagattgatacattttgttcccaccatattttttttttcgtaaaactaatctgcaacagtatagtgctttattgctttactgtaaattatctttcacaataatgatgtaaatggatgctttgttctcttttttgtctactttatttcgcttcaaatgtatgcaccaactattctaaacatttataacttagcgaaccaaatatttttgacagtgattatatcatttagtttcttatgctgtgcagatttggttcatgggagagctctcacatatttcatcggaattcgataatgtaagttatatctgattagtagttcatttccttagttttgtgcttatgtatttcataatcatcagatagcatcttactttaaattgcatacgactcaaaaatggaatatatgtaattaaaccttttagatagctggatctggataatctgtggacttggactgccataatagttaggactgtccccttgaggtggactatctaaatcctacaccagctactatggttttttaaatcttatttatttatgcatatttagccaaacatcaactagttgttgctcataagatgatcagaaatattattgaaataattatgtaactgggtgatgcatacagttttctttctgctctccattttggctaatttcaggtagtaggttgctagcacaagcatattacagttccaaatgttccatcatggttttttctttgttattttcattcttaggtggttcaagtagtacttgaaaactaccgacctcagaagatgcaaaatgatggtcaagttaccaaggattcaagcgaccagttggagcaagaagcccccaaaacggaggactccaaagcagaggactccaaaacggaggactcttccccctttgtcatctctgctgtccccttgtgggagaacatagttaatgttaagggtggagttaaccttactgtgtaatattatctctttctactctgttgatttggtttgtcaattcttctttttcagtaggtggtttctgaacatacttgtgtgatgtgcagggaggaagcaaaggatcctaagttttggtccagaatatgtgtgcacaatatggctaggctttccagggaggcaacaacattccgtcgtatcctggagtctttgtttcggtacttcggcaacaacagttcatggtcacctgaaaatggacttgctctgtgtgtattgttggacatgcaactgttagtggaaaacgcaggtgcttcatttgcatcttttccacacagatactaacattatcatatgcaaagaacctagatatttatttttgataaaatacttcctacaggacaaaacatgcacttaatgttgtctctactgataaagcatattgaacacaagaccatggtgaagcaacaggagatgcagcttagtatcgtggaggtagcagccaccctagcagaacaatccatcgctcaggcttcagcagcaactataggtgccataagtgatcttgtcaggcatttgaaaaggacatttcatattactctcggcagcaaagattcggagctagtaaaatggaatgaaaagttccgaaaggctatagatgattgtctaggacagctggcaaagaaggtatgttctttttctctccctctgcgaacttctatgttttcctatacctgttacatcaccatcatattgtttatataaatgtgattgattcaattgatgcccctcagcaacctgttttctgttctgtgcaatgctatgattagtttcagaagatctatccacaatgcacagaaggtttatcaagggtattttgttgaacaggtaactgatgctggaccagttctggacatgatggccgtgatgctagaaaatattgctagcactcctgttgtagctagatcaactgcagctgctgtttatcgtacagctcaaataattgcttctgttccaaatattacctatcagaataaggtatactgtcaaaactagaagatagaagactatctccttgctgcagtactttcttctgttttgaagacttatcttcttgtgtatgatgtcaggtgtttccagaagctctgtttcatcagttgctcttaacgatgatccaccctgatcatgaagctcgagtagctgcgcaccgcattttcgctattgtcttggtcccctcttccgttgccccctcgattcaagcaagtgtatcaggtcaggctaagaaacatgacatgcagaggacactctctagggctgtctcggtgttttcatcttcagctgccatctttgacaagttgaaaaaggacaagcactcagacaactcacaaggtgatagcagtggcttgcatagtatcagtgaagagtctagtaatgccaaacgttcgaacctacctgtgtctcaaagtcgccgacgtagcatgaaaattcctaatttttccatgaagaggggtccttcaatggctatgagagctccttcagtagccctgagagccccttccatatctctcagagttacttcgatgtctttgagagcaccttccatgtctataaaggcagaccatggttcctcaagccatccagaagatgaaatggtaccttaatcaaatatggcttgttcttaaactctatatgtattaactaaaatcacataattgtttctgcattatcttgaatgcactcaggaatcagttttgctgaagctgagcagtcgccagatcacacttttgctttcatccatttgggctcaagcaacatctcctgaaaatactccagcaaactatgaagccattgctcacacttatagtttgcttctattgttctctggagccaaggtaatcctccttattattacatctatgatctatcatacgcgttattgatgatcatcctaactaaaccctactatcaggggctagtattgattaatttttgccaagcttaaggatatctatcatgatttcctattttcttattctcccttcttttgctcttccaggcatcagtttttgaggctcttactcagagttttcaggttgcattttcactgaggggctattcactgactgaaccaggtagccaagttgccttgaagtagcactaatagtaaattgaaatgcagtgttccatgcgtcatgaaaacttggtcccatgttgtaaatgaatgaggatgcctaacttttctttttgtaagtcttgcagattcattaccaccatgtcggcgccgttccttgtttactcttgctacagctatgatcattttctcttcaagaactttcaacgtgttacctcttattccaatatgtaaacaaatgctgaatgagagaacagtatgtatattcaaaatattgtccagtgcattttttttccttctatagtgtaacctcctaaacaaagacaattttgcaaactgagatgtttacctatttgaagtggtaagaatacatgttagtatcaagttgatggacctaatttactctttagtattaagcttgttatgttgcattagtttaatctttttatccatccctttttttatgttatccttgttatgctatatatacttttctttgtaagtatggtaagagtacattgataataatatcacagcgggcttgaaaccacgatttaaaatcatatccccaaatttgtgtaatgcatatatcaaagttgggtttcaattgcatctatatttagcccccctttgaatcaaaggatctgtgtaggaattttgtaggaaatttttcctatttggccctttgaaacgtagggttgaagctttctaaatcctatgaaattcctaaggaatggttcaatgcatgcagattttttagtaaagtttgcaagagctctaacctcttagaaaacttccttttgagtctatctctcatctgatttctatatttttcctacggtctattcaaacgatcatttgttttgtacttacgttcctgtcaaaatcctatgattttcttattcctctgttttctctatcttgcatttgaaaggaacccttagtctggagataagcaaaccacaattaatcatcttattgttattagaggcatttttgcggcatcttgacttcatgaatagcatagtccttattttgacatgtgtgtcctgttctgtctagggtgatccattcctccgtttggtggatgagtgcaagcttcaggctgtgaaagattccgtggatgatccgtcgaaaatctacggatcaccagaggataatactaacgcactgaagtccctttcagcgatagaactatcagagagtcaatcccgagaatgcattgtctccacaatcatgaacaacataacaaatatgctagaggtaatgttcatcttctcaatggtctcctaaattcattgtttgaacatgagctcaatgaaactgctgtattcgctaaaaagtgcaaccgctgatgacttctctgtttctgcaggcggagttgaatagtgtgaagaatcaactgctaagcgatttctctcccgatgacatgtgtccaacaagcactcatttttttgaagcaactggtgataactcatcaccaggatctcatgataatgatcaccatccagaggtattttgaggctcgcaaatatattttgtgtcctacttaaaatgctaaagttgtgttttttttcaataggctgtgctgatcgacctgggaaatgaccacgatatctttggggaagcttcagaaagtacagctgcttctgcaaatgctgtgcctgtaacagatcttctgagtatcgatcagcttcttgaaacagtatgccttgctctcttaaactcattttctatgttcttgttgtactcttctgatgaggtaacctggcatgaataaagttactattgtgtgtgatattctgcattctaggatacctaggaaaacacccaccaagttttcagcaggtatacagtagtagtttgaaagttacaagatctcagcagaatggcgaggattcccatttgcaaaattcaaccaagacctgcaccaatgtgatacatcaaagtcaatgttcctatcattgggagaaaacaaatgatccatgcctgaaatgctatattgtctaaccatatgtcaaattaacctatttgtttcatcaacgtcctaattaaagaacaacacctgtttgaaaagtaaagaatgctagatctataagttcgtttcacttggcatgataaccgatttgacttatgttttcatcctctggcattttcacaggttgtcacagacccggcacctcatacagaacgagtgtctgtatcaacagacatgccattcaaggagatgagtagccaatgcgaagccctcactgtcaggaaacatcagaaaatggcctccttcatgagcttctcgcaggatatgacaatggatcccatggcaaccaatcagccgttccagacggatttgtcccttttccatgacccatatccgcctcaggtagatcgaatcgcacagcaaacaatttcaactctaaatgccattcttcttttaccatgtcaatccactgacaaaagcatatacatatactgcattttcatatatataataaattaaggccaataatttgattctgagcaggttggggtgccgaacacgaatccgttcgtcgacgataacctgtatggttacccccagtacatgaacatgaacgaagccaatccacagccaacttatgagcaagcccagcaacatttcctgaggttgccggcatcaagtccatacgacaattttcgcagggctgctggttgttagaggttgagcctgcagcagcaagtctatcatgccaccaagttcttcacatagatgagcaaagaaaagaaatctcaagccgataataaaccgaatgatgtggcaattttccgtttattttgaaagaggaatatatgcatatccgtgtgcatggtcttagagggtcaaccggattcaacacccactcgattcgttctttatgtatagcggtatatacatatatataggttaattcttttttgtttgtttttgccattgcaacgtgtagagaagaaactgtggggagcagtgcctctatcacgagctatacatgtatgtgtgtatgtaacttgtgtcaaatgctgcaaattggagagtatatcatcacggaattggtgtggtctatgagaaaaagaggtgtctttcttgaaccagaaagagaagcctccctgttgacaacttcaaatgtaattatcattatgtaaatgggagcaccatctttgtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0205900, RefSeq:Os07g0205900