Os07g0208100

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Revision as of 08:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0208100| Description = Similar to Polygalacturonase A (Fragment)| Version = NM_001065696.1 GI:115471124 GeneID:4342698| Length = 1588 bp| ...")
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Gene Name

Os07g0208100

Description

Similar to Polygalacturonase A (Fragment)

Version

NM_001065696.1 GI:115471124 GeneID:4342698

Length

1588 bp

Definition

Oryza sativa Japonica Group Os07g0208100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:5854911..5856498

Sequence Coding Region

5855362..5855775,5855899..5856159

Expression

GEO Profiles:Os07g0208100

Genome Context

<gbrowseImage1> name=NC_008400:5854911..5856498 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:5854911..5856498 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctcgcctgtcgatcacagcaccagaaactgccccaaacaccgatggcatccacatcacacgcagcagagatgttcaggtgacagactgcacgatcaagaccggggatgactgcatgtcgatcgaggacggaaccaagaacctgcatgtcaagaacatggtgtgtggaccgggacacggcatcagcatcggcagcttgggggatcataattctgaagctcatgtcaacaatgtcaccgtggacaatgtcaggctgtatggcacaacgaatggagctcgcatcaagacatggcagggaggaaagggttcagcgaagaacatcgtgttccaaaacatggtcatggacaatgtctggaaccccatcatcatcgaccaaaactactgtgactcttctacaccctgcaagcaacagaaatctgcagtggaggtgagcaatttgctgttcaagaacatcaggggcacaagtgcatcagaggaggccatcgtgctgcattgcagcaacagtgtgccttgccatggcataaccttggagaatgtcaatctcactgtcaagggaggtagcagtaatgccaagagcacctgccagaatgcagaatggaagaaatctggtgtgtcagtccattgccctgtggtttcaaaaattgatctggagctggttggaacatcagattaa</cdnaseq>

Protein Sequence

<aaseq>MSRLSITAPETAPNTDGIHITRSRDVQVTDCTIKTGDDCMSIED GTKNLHVKNMVCGPGHGISIGSLGDHNSEAHVNNVTVDNVRLYGTTNGARIKTWQGGK GSAKNIVFQNMVMDNVWNPIIIDQNYCDSSTPCKQQKSAVEVSNLLFKNIRGTSASEE AIVLHCSNSVPCHGITLENVNLTVKGGSSNAKSTCQNAEWKKSGVSVHCPVVSKIDLE LVGTSD</aaseq>

Gene Sequence

<dnaseqindica>452..865#989..1249#cttattatgccttgttaggttcattctttgaataattgaacttaatttgtttggagaaggggcggcatggtaccaatgaccaacaaagaggtaactttccagattgctatgtagatggtgattttactgtcctgtgtatgatctgcccccataatcatcatgatacagtaaagttttatatacaagtcaccatggtacaaaattaaagtgttacaaagtgctccctccgttcttttttgtttgacgtccaacgtcaaacattgagggatgtaggtagtattcattatgaaaattttgaaagcagcagtgattgctagtatgatttcctggacatgcctgtggctgtgttgctaagaacatagggaagcactttattctgaaagtggagaacctgaaggtggtgaacagccagcaaatccagatttcagtggaggattgcaccgacgtgaagatgtctcgcctgtcgatcacagcaccagaaactgccccaaacaccgatggcatccacatcacacgcagcagagatgttcaggtgacagactgcacgatcaagaccggggatgactgcatgtcgatcgaggacggaaccaagaacctgcatgtcaagaacatggtgtgtggaccgggacacggcatcagcatcggcagcttgggggatcataattctgaagctcatgtcaacaatgtcaccgtggacaatgtcaggctgtatggcacaacgaatggagctcgcatcaagacatggcagggaggaaagggttcagcgaagaacatcgtgttccaaaacatggtcatggacaatgtctggaaccccatcatcatcgaccaaaactactgtgactcttctacaccctgcaagcaacaggtatacaaagttaaacttaatttttgacataaaatcatgatgatcaagttgaatttaatttctttacctattattgaattcgtctgcacggtttagcttaactagagataattttgattgcagaaatctgcagtggaggtgagcaatttgctgttcaagaacatcaggggcacaagtgcatcagaggaggccatcgtgctgcattgcagcaacagtgtgccttgccatggcataaccttggagaatgtcaatctcactgtcaagggaggtagcagtaatgccaagagcacctgccagaatgcagaatggaagaaatctggtgtgtcagtccattgccctgtggtttcaaaaattgatctggagctggttggaacatcagattaagtggaggatgtagagtgtcagatgatctttagagaagattatatgtagagtaggaggataaatacgtagcggaaactacaactttggtgtaaacttgaaatcttaggagggatacatgatgtgtacagatagatactagatagagaggccctaaattgacagagtgtgcgaagcaactctctgggttcttgagggatacatgatgtgtacaggtatatactagatagagaggccctaaaaaattaaccgtgtgtgaagcaacactcggagttcttgtactgagttcttgttctcgaagcctcacataagtgatcaaagcccattgcgagctattttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0208100, RefSeq:Os07g0208100