Os07g0227700

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Revision as of 08:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0227700| Description = Conserved hypothetical protein| Version = NM_001065753.1 GI:115471238 GeneID:4342760| Length = 4188 bp| Definition ...")
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Gene Name

Os07g0227700

Description

Conserved hypothetical protein

Version

NM_001065753.1 GI:115471238 GeneID:4342760

Length

4188 bp

Definition

Oryza sativa Japonica Group Os07g0227700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:7177705..7181892

Sequence Coding Region

7178628..7178899,7179143..7179794,7179886..7180085,7180173..7180417,7180559..7181697

Expression

GEO Profiles:Os07g0227700

Genome Context

<gbrowseImage1> name=NC_008400:7177705..7181892 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:7177705..7181892 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctaggtgggatgaaattttgactcttccagttcagaatccacccacgccagagttttcggcatcagatatcatgtggtccagggtggagggatggaaggactcaatggacaggcttgcgcttattccattttcaagggtgaatgattttgttagaggagaatcaaacaacaaagagtgcccaacaagatttcatgtagaagcacggcgaaggcgtccaccaacaatgaactgcaaaccaaaagttgatgggatactcgagtatattctgtattggtgttcttttggtccagatgattatagaaagggtggctctgtccgccctagcaggaactcttcaacaaagaggaaaacacctgctggtcgtcctcatacaaagaggggctgtatttgccattttattgtgaagcgtttgattgctgaaccatctgtcgctcttgtgatatataaccatgataagcatgtagataagatagggaagccctgccatggtcccatggacaatatggctattgggacgaaggccatgtttgcgccttacatatcagatgaacttcgtcttcagattatgtctttgctctgtgttggtattccagtggagaccataatgcagagacatacagaaatgatcgaaaagcaaggaggaccatcaaaccgagatggtcttcttactcacagatatgttaggaggttggaaaggaaaattcgtcgttctgtttacgaacttgatgacgatgatgctataagcattaacatatgggttgaaaatcaccaaaaccatatatttttgtatgaggacttttcagataaggacacctttatcgtgggcatccagacagattggcagctccagcagatgattcagtatggcaaccgtagtttattggcttctgattcaaagtttggaacaaacaaattaaagtatcctgtacatagcctccttgttttcgacaagcagaaaaatgcaattcctgttgcttggatcataactccgaatttttcacatggtgaagcatatagatggatgggtgccctttatgatcgagttcgtacaaaagatccaacatggcagttgggtggctttattattgatgatccctttgcagatgtgcgcacgataagggaagtattccagtgccctgtgctgattagcccatggcgcataaggcatgcttggcataaaaatttaatgaagaagtgcccagatattgagaagcgtccgatgatggctaaacgacttggggagttaatctgcaatatctgcagaggaaatggtggcatggaattatttgaagcctttctggaagattttgttgattgtgctggttttctagactacttcagagctctatggtttccaagacttgggtcatggataactatgttaagaaccaccccgttggctactactgaggttgcttcagcaatcgagagctaccatcacctgctaaaactcaggctattgaatgaggcaaatgaaagagtataccagcgtgcagattggttggttcataagctgggtacgaaggttcattcctactactggttggatgaatattctggtaaggacaacttttctcgttactggaggagtgagtggaaaagtggcccaaatccatggcagcagggattgcaaatcccagattctgatgttgttgtcgaaggcaattgcgccagagtggtttgccagaaaaacaaggagaggtcccatgtcatagtgaatccaggttctgatcttgcattgtgtgattgtagctggtccaggaagggaaacatttgcaaacatgccattaagtcaactaaagtcttccgccaaagggggctggcaccaccatccttggcactgtttcgctattaccaggcactggctaatgttgttcattgcccacccagtgacactttgattagtgaccatgcagttgccgtagcaatttttgttagaacacagttagattctctgttggatgcaaccaatggtaattcttcaaacaggtcaacttccaaggatccgcaatcagtcattgagccaagagaatctgatgttcgggagggcagcattgagaatgatgtatgtgcaagtcagtctcaggctgagtgtggtgatgaagtttctgatgagcagaatgatgatttagaccgttttgttttcaagaaaagaaagtccagggaagcatctgatgaagaaggtagccctacggcgacgcaaatcacacaaccttctgaaaccgaaagcagtcaagcaactgatctgcaggaacctcttgatcgtcgggaaaatcgtgctcccaagaaatcgaagtcaaaagaagcttctgatgggggaaaggctaatgcaaggcaagcgaagcaaccttctgaaactgagagtaggccagcaattgatcagcaggaacctcttcatcatcgtcaagaaaaccctgctcacaagaaaacgaagtcaggagaagcttctgatggcgaagaaactatggcaatgcaagtcatggaaccttctgaaactgaatga</cdnaseq>

Protein Sequence

<aaseq>MARWDEILTLPVQNPPTPEFSASDIMWSRVEGWKDSMDRLALIP FSRVNDFVRGESNNKECPTRFHVEARRRRPPTMNCKPKVDGILEYILYWCSFGPDDYR KGGSVRPSRNSSTKRKTPAGRPHTKRGCICHFIVKRLIAEPSVALVIYNHDKHVDKIG KPCHGPMDNMAIGTKAMFAPYISDELRLQIMSLLCVGIPVETIMQRHTEMIEKQGGPS NRDGLLTHRYVRRLERKIRRSVYELDDDDAISINIWVENHQNHIFLYEDFSDKDTFIV GIQTDWQLQQMIQYGNRSLLASDSKFGTNKLKYPVHSLLVFDKQKNAIPVAWIITPNF SHGEAYRWMGALYDRVRTKDPTWQLGGFIIDDPFADVRTIREVFQCPVLISPWRIRHA WHKNLMKKCPDIEKRPMMAKRLGELICNICRGNGGMELFEAFLEDFVDCAGFLDYFRA LWFPRLGSWITMLRTTPLATTEVASAIESYHHLLKLRLLNEANERVYQRADWLVHKLG TKVHSYYWLDEYSGKDNFSRYWRSEWKSGPNPWQQGLQIPDSDVVVEGNCARVVCQKN KERSHVIVNPGSDLALCDCSWSRKGNICKHAIKSTKVFRQRGLAPPSLALFRYYQALA NVVHCPPSDTLISDHAVAVAIFVRTQLDSLLDATNGNSSNRSTSKDPQSVIEPRESDV REGSIENDVCASQSQAECGDEVSDEQNDDLDRFVFKKRKSREASDEEGSPTATQITQP SETESSQATDLQEPLDRRENRAPKKSKSKEASDGGKANARQAKQPSETESRPAIDQQE PLHHRQENPAHKKTKSGEASDGEETMAMQVMEPSETE</aaseq>

Gene Sequence

<dnaseqindica>924..1195#1439..2090#2182..2381#2469..2713#2855..3993#cctagccagtcgatctccccgtccccacggccttcccgtctccaccgcctccatccagcgaagggagcagcgccaccgccgccgccgccgccgccgccaccggtgagcacccatacctacctccacactatcccctccctctacccatagaactagcttctcttgtagatctgggggcttctgtgtcagcttcccaaaaagaatccattccagtggaattggaatatttccgctgcaatatcgtagagcatatactaggttttagttggcttgcgtgcgtcgtcaccattgacttgcgcgattggtgagttttggagaagggttaaggcgtgcgtaggccaatatgggggagtttgaggagggttaggacttgaacaagtgtagccaacggtgcaggttcttgggtgaggggattgcttagaaatgtctggtttgctagcgagttgattcattcagaggtagtaatgctgttacagcactcttgcaaccagaatgcaagttatcgaatgcccggcttgagaaaaaagaaggtttacttatgggttcttagaaaaggatgaacgtggaaaggataccgctgattcatgtctaacagtcttagcataccacaaaatctaatgcgaacttccccttgtcttggggtgcttgaatcacctactgagattgtggatatgctcttttcgattcaactgcaagtatttgtttttaatcatgtgatgtgaacaacactaatgtttaaattttcgaaggcataacatgacacttggtttaggtgtaactgtcttacaaatatatgctcttttttttgtttgtctatgctgtcctctttgcacagaccatagcttttttttttcttaaaaaaatatatgctactttggctttgatttcgttgattatttgtgatgattcctatgcaaatgcagatggctaggtgggatgaaattttgactcttccagttcagaatccacccacgccagagttttcggcatcagatatcatgtggtccagggtggagggatggaaggactcaatggacaggcttgcgcttattccattttcaagggtgaatgattttgttagaggagaatcaaacaacaaagagtgcccaacaagatttcatgtagaagcacggcgaaggcgtccaccaacaatgaactgcaaaccaaaagttgatgggatactcgagtatattctgtaagtaaatgtaagcattatgcatttctgtccgactaatttttaaactggaatgtgaacctgggcttcttattcatcttgtaaactagaacaaatttattattgctatttgttaaatcgatcttatcttttaaatggctgataatgctccttctatttatgtctcttaacattagatatgctctgttaaataggttataatttacattaagcttttgaacctcatgataccattaatttcaggtattggtgttcttttggtccagatgattatagaaagggtggctctgtccgccctagcaggaactcttcaacaaagaggaaaacacctgctggtcgtcctcatacaaagaggggctgtatttgccattttattgtgaagcgtttgattgctgaaccatctgtcgctcttgtgatatataaccatgataagcatgtagataagatagggaagccctgccatggtcccatggacaatatggctattgggacgaaggccatgtttgcgccttacatatcagatgaacttcgtcttcagattatgtctttgctctgtgttggtattccagtggagaccataatgcagagacatacagaaatgatcgaaaagcaaggaggaccatcaaaccgagatggtcttcttactcacagatatgttaggaggttggaaaggaaaattcgtcgttctgtttacgaacttgatgacgatgatgctataagcattaacatatgggttgaaaatcaccaaaaccatatatttttgtatgaggacttttcagataaggacacctttatcgtgggcatccagacagattggcagctccagcagatgattcagtatggcaaccgtagtttattggcttctgattcaaagtttggaacaaacaaattaaaggtttgtcaatgacagttgtttcatttttgttccagtagtgctttaaggtttgcttgatttcatggtagcatttctatttaccattttgcagtatcctgtacatagcctccttgttttcgacaagcagaaaaatgcaattcctgttgcttggatcataactccgaatttttcacatggtgaagcatatagatggatgggtgccctttatgatcgagttcgtacaaaagatccaacatggcagttgggtggctttattattgatgatccctttgcagatgtgcgcacgataaggtaaatgatgcttttctattttaatctagtgcattactatacgctttctggggttgcagttcctgagtgtaatagcatgctgaacagggaagtattccagtgccctgtgctgattagcccatggcgcataaggcatgcttggcataaaaatttaatgaagaagtgcccagatattgagaagcgtccgatgatggctaaacgacttggggagttaatctgcaatatctgcagaggaaatggtggcatggaattatttgaagcctttctggaagattttgttgattgtgctggttttctagactacttcagagctctatggtttccaagacttggttggtccatgtctctttcctgtatcacatttgcttagcccacatctgaatttcagtttccgttgtttgagtctactggtatttgatgaagttttctatcactatttaatctgctagtgctgactgccgaatgtattccagggtcatggataactatgttaagaaccaccccgttggctactactgaggttgcttcagcaatcgagagctaccatcacctgctaaaactcaggctattgaatgaggcaaatgaaagagtataccagcgtgcagattggttggttcataagctgggtacgaaggttcattcctactactggttggatgaatattctggtaaggacaacttttctcgttactggaggagtgagtggaaaagtggcccaaatccatggcagcagggattgcaaatcccagattctgatgttgttgtcgaaggcaattgcgccagagtggtttgccagaaaaacaaggagaggtcccatgtcatagtgaatccaggttctgatcttgcattgtgtgattgtagctggtccaggaagggaaacatttgcaaacatgccattaagtcaactaaagtcttccgccaaagggggctggcaccaccatccttggcactgtttcgctattaccaggcactggctaatgttgttcattgcccacccagtgacactttgattagtgaccatgcagttgccgtagcaatttttgttagaacacagttagattctctgttggatgcaaccaatggtaattcttcaaacaggtcaacttccaaggatccgcaatcagtcattgagccaagagaatctgatgttcgggagggcagcattgagaatgatgtatgtgcaagtcagtctcaggctgagtgtggtgatgaagtttctgatgagcagaatgatgatttagaccgttttgttttcaagaaaagaaagtccagggaagcatctgatgaagaaggtagccctacggcgacgcaaatcacacaaccttctgaaaccgaaagcagtcaagcaactgatctgcaggaacctcttgatcgtcgggaaaatcgtgctcccaagaaatcgaagtcaaaagaagcttctgatgggggaaaggctaatgcaaggcaagcgaagcaaccttctgaaactgagagtaggccagcaattgatcagcaggaacctcttcatcatcgtcaagaaaaccctgctcacaagaaaacgaagtcaggagaagcttctgatggcgaagaaactatggcaatgcaagtcatggaaccttctgaaactgaatgaaccgaatgattcttctgcttaggttatatgagatgttgtaggaatgtaggtggtacctgactcctttatgagcttaggctattgttttgtttgaatattaggaggtctgtacatactgtgttaccgaacatttatcagaattagggtggtccaattgtttaattagagctgatgatgcatctgtgttaggcaggc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0227700, RefSeq:Os07g0227700