Os09g0457400

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Revision as of 07:28, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0457400| Description = Alpha-amylase isozyme 3A precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)| Version = NM_001069902.1 GI:11...")
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Gene Name

Os09g0457400

Description

Alpha-amylase isozyme 3A precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase)

Version

NM_001069902.1 GI:115479546 GeneID:4347262

Length

2260 bp

Definition

Oryza sativa Japonica Group Os09g0457400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:17942704..17944963

Sequence Coding Region

17942847..17942945,17943072..17943202,17943612..17944419,17944510..17944794

Expression

GEO Profiles:Os09g0457400

Genome Context

<gbrowseImage1> name=NC_008402:17942704..17944963 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:17942704..17944963 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaagcaaatggccgccctgtgtggctttctcctcgtggcgttgctctggctcacgcccgacgtcgcgcacgcgcagacgcagatcctcttccagggttttaactgggactcgtggaagaagcagggtggttggtacaacatgctcaaggaccaggtgggcgacatcgccagcgccggcgtcacgcacgtctggctcccacctcccacgcactccgtctcgcctcaaggctacatgccgggacggctctacgacctgaacgcgtccaagtacggcaccaaggcggagctcaagtcgctcatcgccgccttccacgccaagggcatcaagtgcgtcgcggacatcgtcgtcaaccaccgctgcgccgacgacaaggacggccgcggcgtctactgcatcttcaagggcggcggcccgcgcggctgcctggactggggcccctccatgatctgctgcgacgacacgcagtactccgacggcacgggccaccgcgacaccggcgccgacttcgccgcggcgcccgatatcgaccacctcaacccgctcgtccagcgggagctctccgactggctcaggtggctcaggagggatgtcggcttcgacggctggcgcctcgacttcgccaagggctactcggcggccgtcgccaggacgtatgtccagaacgccaggccgagcttcgtcgtggcggagatatggaactccctgagctacgacggcgacgggaagccggcggccaaccaggacggccagcggcaggagctcgtgaactgggtgaagcaggttggcggcccggcgacggcgttcgacttcacgaccaagggcatcctgcagtcggcggtgcagggcgagctgtggcggatgcgggacaaggacggcaaggcgccgggcatgataggctggtatcccgagaaggccgtcaccttcgtcgacaaccacgacaccggctcgacgcagcggatgtggccattcccgtctgacaaggtcattctgggctacgcctacatcctcacccacccaggagtaccatgcatcttctacgaccacgtgttcgactggaacctcaagcaagagatcaacgcgctggcggcgacgaggaagcgcaacgggataaacgccgggagcaagctgcgcgtcctggcggcggagagcgacatgtacgtggcgatggtcgacgagagggtcatcaccaagatcgggccgagaatagacgtgggcaacataatcccgtcggacttccacatcgtggctcatggcaatgactactgcgtctgggagaagagcggccttagagtcccagaaccagaaggtcggcgctag</cdnaseq>

Protein Sequence

<aaseq>MGKQMAALCGFLLVALLWLTPDVAHAQTQILFQGFNWDSWKKQG GWYNMLKDQVGDIASAGVTHVWLPPPTHSVSPQGYMPGRLYDLNASKYGTKAELKSLI AAFHAKGIKCVADIVVNHRCADDKDGRGVYCIFKGGGPRGCLDWGPSMICCDDTQYSD GTGHRDTGADFAAAPDIDHLNPLVQRELSDWLRWLRRDVGFDGWRLDFAKGYSAAVAR TYVQNARPSFVVAEIWNSLSYDGDGKPAANQDGQRQELVNWVKQVGGPATAFDFTTKG ILQSAVQGELWRMRDKDGKAPGMIGWYPEKAVTFVDNHDTGSTQRMWPFPSDKVILGY AYILTHPGVPCIFYDHVFDWNLKQEINALAATRKRNGINAGSKLRVLAAESDMYVAMV DERVITKIGPRIDVGNIIPSDFHIVAHGNDYCVWEKSGLRVPEPEGRR</aaseq>

Gene Sequence

<dnaseqindica>144..242#369..499#909..1716#1807..2091#acgcagcaagagccgatcgatcattgtccaagtctccaagcgatcagctagctgacttgacgacgctgcgagcagcggcagcaagagagcagcagcacaaagggttcccctttcacaagtgtccggccggctgcacgtaggccatggggaagcaaatggccgccctgtgtggctttctcctcgtggcgttgctctggctcacgcccgacgtcgcgcacgcgcagacgcagatcctcttccaggtgctttattcatttcacccataaacgggcaagggggttcacctgtgtaaaattatcgacagcaagtcagaacggctaatataattcacgtacaaccgaatacgtgtctgtaacatttttgtgcagggttttaactgggactcgtggaagaagcagggtggttggtacaacatgctcaaggaccaggtgggcgacatcgccagcgccggcgtcacgcacgtctggctcccacctcccacgcactccgtctcgcctcaaggccagcaagccatgcatctccttcatctcgttacgcttctctttgtagcatgtccgtttctaaatatttgacaccattgactttttagcatatgtttaaccgtttactttatttaaatttttttgtgaaatatgtaacactatatgtatacatataagtatatttaacaataaattaaatgataggaaaagaattaataattatttaaattttttaaataagatgaacggtcgaacatatttaaaaatataacggtatgaaatatttagaaagggagggagtatattacgtgacgtaaagtgtgttacggccagtgtcttactgcaattatcagctgatctagctcatcaggcaattgacatgtatgcatgcatgtgtttaaatcgatttttcccgtgcatgcacgcaggctacatgccgggacggctctacgacctgaacgcgtccaagtacggcaccaaggcggagctcaagtcgctcatcgccgccttccacgccaagggcatcaagtgcgtcgcggacatcgtcgtcaaccaccgctgcgccgacgacaaggacggccgcggcgtctactgcatcttcaagggcggcggcccgcgcggctgcctggactggggcccctccatgatctgctgcgacgacacgcagtactccgacggcacgggccaccgcgacaccggcgccgacttcgccgcggcgcccgatatcgaccacctcaacccgctcgtccagcgggagctctccgactggctcaggtggctcaggagggatgtcggcttcgacggctggcgcctcgacttcgccaagggctactcggcggccgtcgccaggacgtatgtccagaacgccaggccgagcttcgtcgtggcggagatatggaactccctgagctacgacggcgacgggaagccggcggccaaccaggacggccagcggcaggagctcgtgaactgggtgaagcaggttggcggcccggcgacggcgttcgacttcacgaccaagggcatcctgcagtcggcggtgcagggcgagctgtggcggatgcgggacaaggacggcaaggcgccgggcatgataggctggtatcccgagaaggccgtcaccttcgtcgacaaccacgacaccggctcgacgcagcggatgtggccattcccgtctgacaaggtcattctgggctacgcctacatcctcacccacccaggagtaccatgcatcgtacgcaattaacttctcaaagcttgttataacatccatggatcgatgcttcatcattcataggtgacaattttgttttgtgttgtttagttctacgaccacgtgttcgactggaacctcaagcaagagatcaacgcgctggcggcgacgaggaagcgcaacgggataaacgccgggagcaagctgcgcgtcctggcggcggagagcgacatgtacgtggcgatggtcgacgagagggtcatcaccaagatcgggccgagaatagacgtgggcaacataatcccgtcggacttccacatcgtggctcatggcaatgactactgcgtctgggagaagagcggccttagagtcccagaaccagaaggtcggcgctagaaacggctcgcaagctagctacacagttcttaataacttggtcgcaaaaaaaaagttcttaataatttgtacgagaaatgttcgtttctgtttgcatatatagcttatgaaatcttaccaatatatactgctctgttttctatagttcatcccggaaatttgaacttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0457400, RefSeq:Os09g0457400