Os07g0235800

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Revision as of 08:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0235800| Description = Pathogenesis-related transcriptional factor and ERF domain containing protein| Version = NM_001065779.1 GI:115471290 ...")
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Gene Name

Os07g0235800

Description

Pathogenesis-related transcriptional factor and ERF domain containing protein

Version

NM_001065779.1 GI:115471290 GeneID:4342787

Length

4368 bp

Definition

Oryza sativa Japonica Group Os07g0235800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:7577703..7582070

Sequence Coding Region

7577909..7578327,7578430..7578455,7578576..7578606,7578690..7578777,7578889..7579034
,7579641..7579685,7579776..7579879,7579976..7580112,7580553..7580654
,7581375..7581587

Expression

GEO Profiles:Os07g0235800

Genome Context

<gbrowseImage1> name=NC_008400:7577703..7582070 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:7577703..7582070 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgctggatctcaatgtggagtcgccgggtgggtcggcggcgacgtcgagctcgtccacgccgccgccgccgcccgacggtggcggcggggggtacttccggttcgacctgctcggcgggagccccgacgaggacgggtgctcctcgcctgtcatgacgcgccagctcttcccttcgccgtctgcggtggtggcgctggcgggggacgggtcgtcgacgccaccgctgacgatgccgatgccggcggcggctggggaggggccgtggccgcgccgcgcggcggatctcggggtggcgcagagccagaggtcccccgccggcgggaagaagagccgccgcggcccgaggtctcggagctcccagtacaggggcgtcaccttctacaggaggaccgggcgatgggagtcgcacatctgggactgcgggaagcaggtgtacctgggtggtttcgatacagctcatgccgcagcgagggcctatgatcgcgcggcgatcaagttcagaggcctcgacgcggatatcaactttaatctgaatgactatgaggacgacttgaagcagatgcgcaattggaccaaggaggagtttgtgcacatacttcggcgccaaagcacaggatttgcaagggggagctcaaagtaccggggtgtgacactgcacaagtgtggccggtgggaagctcggatgggccagctgctcggcaagaagtacatctatctaggattgtttgacagtgaaattgaggctgcaagagcatatgaccgggcagctatccgcttcaatggaagggaagctgttactaattttgatcctagttcttatgatggagatgttctacctgaaaccgacaatgaagtggttgatggagacatcattgacttaaatctgagaatttcacagcctaacgttcatgagctgaaaagtgatggtaccctaactgggttccagttgaattgtgattctcctgaagcttcaagttctgttgttactcagccaataagtcctcagtggcctgtgcttcctcagggcacatcgatgtcccagcatccacatttatatgcatctccttgtccgggcttctttgtgaacctcagggaagtacctatggagaaaagacctgagttgggtccccagtcgttccctacttcgtggtcatggcaaatgcagggctcccctttgccattactccctactgcagcatcatcaggattctctacgggcaccgtcgccgacgccgcccgctcgccttcctcccgcccccatccatttcccggccaccaccagttctacttccccccgaccgcctga</cdnaseq>

Protein Sequence

<aaseq>MVLDLNVESPGGSAATSSSSTPPPPPDGGGGGYFRFDLLGGSPD EDGCSSPVMTRQLFPSPSAVVALAGDGSSTPPLTMPMPAAAGEGPWPRRAADLGVAQS QRSPAGGKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARA YDRAAIKFRGLDADINFNLNDYEDDLKQMRNWTKEEFVHILRRQSTGFARGSSKYRGV TLHKCGRWEARMGQLLGKKYIYLGLFDSEIEAARAYDRAAIRFNGREAVTNFDPSSYD GDVLPETDNEVVDGDIIDLNLRISQPNVHELKSDGTLTGFQLNCDSPEASSSVVTQPI SPQWPVLPQGTSMSQHPHLYASPCPGFFVNLREVPMEKRPELGPQSFPTSWSWQMQGS PLPLLPTAASSGFSTGTVADAARSPSSRPHPFPGHHQFYFPPTA</aaseq>

Gene Sequence

<dnaseqindica>207..625#728..753#874..904#988..1075#1187..1332#1939..1983#2074..2177#2274..2410#2851..2952#3673..3885#acgtcccatccatccctccccccccttttccctcctcctccacctccactgccatggccgcctccgccgctcctctctcccgcgtggtagccgccgccggttgccgccgctaggggagcgcgacgggggaacggtaggggcgacccagctcgctctgtcgccccgcggctggtgggggtgcgcgcgggggagagcggttggttagtatggtgctggatctcaatgtggagtcgccgggtgggtcggcggcgacgtcgagctcgtccacgccgccgccgccgcccgacggtggcggcggggggtacttccggttcgacctgctcggcgggagccccgacgaggacgggtgctcctcgcctgtcatgacgcgccagctcttcccttcgccgtctgcggtggtggcgctggcgggggacgggtcgtcgacgccaccgctgacgatgccgatgccggcggcggctggggaggggccgtggccgcgccgcgcggcggatctcggggtggcgcagagccagaggtcccccgccggcgggaagaagagccgccgcggcccgaggtctcggagctcccagtacaggggcgtcaccttctacaggaggaccgggcgatgggagtcgcacatctggttagcttcgccttgctcgatttccctcacgctgacttcctctgcttgactctgcttgattggagtagtaatctcttcgtttgtctcgtccaattttggcagggactgcgggaagcaggtgtacctgggtgagctcctatttctagtctcccaagctaaattcgctcgcatgactgctaaatttgggtctctacttagcttgattccgatttgtttgctcctgccttgttttttttttctgttttcaggtggtttcgatacagctcatgccgcagcgaggttactataaatggtcaccaattgtatcttaattgttgctctggtttgccctgtgtgctgagattgtagaaccccttgtgcagggcctatgatcgcgcggcgatcaagttcagaggcctcgacgcggatatcaactttaatctgaatgactatgaggacgacttgaagcaggttgtttggaatatagttcaattgtcatgtgtgattctttaggttctaaggggaggttcattcaccggcctgtgatggtttatgatggattggttcgtgctgtgttgttagatgcgcaattggaccaaggaggagtttgtgcacatacttcggcgccaaagcacaggatttgcaagggggagctcaaagtaccggggtgtgacactgcacaagtgtggccggtgggaagctcggatgggccagctgctcggcaagaagtaagatccctgaaacattgattgttcttgctagtaacttacaatacaatacattttagattagttcaggaccatttttcatgccatgaacgaaaactgtgtcaagtttgcttttcaaaaagggaaagaaaaaaaatgtgtcactaccaagctggagaatggtaggctacccctggagtccacatccacctgaagatttgatgttgactcttcacacactagccatttactattggaacaccacaggtgttcaatgattatagattgctagcttctttaggaaagaactaagtgaatcggaatggctcctcggaattaattgaggggaaatgtttttgtttccttggggattgtgttttgcatcctaagtcagtgataggtgaaaagcttcatttcaatgctcttggttgtttttgccactaagaatgttctgcttatttacgttgaatttttgattggctgttcgtatcatagttgtgcatttcctatatattacaatctttgtgaactttagataattctggcatgagctctctctgtggtattgttctattaacagaagtatcattctgtcaattccccactgataagtgatcttttgtgcaggtacatctatctaggattgtttgacagtgaaattgaggctgcaaggttcagttagtagtactttgctcttctcagtttgatatgtgcttgctattcctatacttctctcactttcatctactcttcaacttgtagagcatatgaccgggcagctatccgcttcaatggaagggaagctgttactaattttgatcctagttcttatgatggagatgttctacctgaaaccgacaatgaaggtatttcttttgtactatgtatattgtgctttatccactagaacgacaaatccaaattttatattaacaaaagcacactggggattgtcttagcagtggttgatggagacatcattgacttaaatctgagaatttcacagcctaacgttcatgagctgaaaagtgatggtaccctaactgggttccagttgaattgtgattctcctgaagcttcaagttctgttgttactcaggtaaatatgctacaatatttggtgtttgtaaccgctataccatttgagatttgaccgtcttcagattcttttgatcaggtggttagtcctttttcataacattatactatcactttcaaaataattagtacactaattgtatgtgtcactagaattgttgtatgaaaccatctgggaaccatcttatgcagcttattgacaaatgacaactcactgttgatgtattcccaaatcaagaaaagccaatctttttattcaatttctccagttcattgaattgaaaaagaaattgccgaacaactaccacctgaagagactggctagatattttgtttatctgtgtatttttataacctataacagttccaaagccacaaagctcttttaccttgattctgataacgttaactgaggtatcattttgtgattgttttctgtagccaataagtcctcagtggcctgtgcttcctcagggcacatcgatgtcccagcatccacatttatatgcatctccttgtccgggcttctttgtgaacctcagggtatatctatcatcaaaacttatatgcaatttgaaaagacagttaaacttgtttcaagttaacattcgattgctaattagctactacttccatgctcctatttcttgagatgacgaaccatatgtttgttcctttaattacataatggtagccgtagatactgtttgccttgtgaactgtcagatatagcaggaagtaaatctgtcagcttgcaactttccatgaaccacagctgtccaactttatacagtggatgatgacttgcatttgatacatcctagtactttcttgttgcactctgcagctttagctctgaagatgctctatatttccatgaatgctcacgttagctctgaaatttcgaactttcactccataacatgctcacttaggctgtgtttagatccaaacttcagttcttttccatcacatcaacctgtcatacacacacaacttttcagtcacatcatctctaatttcaaccaaaatccaaactttgccatcaactaaacacagccttattcattgttccaccttttatttctgccattgctaaggtccaatcttgatacctcagagagctgcatgatgtgtagatagtcctaacttaggtccgttggttagaatcatccattcatgtttaggaaaagtgattaacaacgtgtgctgcattaaccattaatgtggtcaactctgatgcttgtgctatggtcactgcaggaagtacctatggagaaaagacctgagttgggtccccagtcgttccctacttcgtggtcatggcaaatgcagggctcccctttgccattactccctactgcagcatcatcaggattctctacgggcaccgtcgccgacgccgcccgctcgccttcctcccgcccccatccatttcccggccaccaccagttctacttccccccgaccgcctgactgccacctattctggtggaggcgacacctcaccgtgcatccaccgccgcttgctgataacattcgtcgtttgtccagagagggaccttctccatatgatatccctctctatgttccacctggttatgatcagaattctcacgctcatgattcttttatcttcatttttgagtgcgaaaccacgaatcgtgaccgtgctaccaggtaaacacccttgtacctctttgactctacaataaaattaatgtaagatattctggctaaaagtgattggccctccctactgtatttttacagagttgtaatttgaacagtgggcactaaagctggggcccactcgcaccagtgtctagtggagcgaagctttgcccttttcttgctatccagcaactattcctccgcctgcctccattgctgacagtggagatagcttcccagtggtcactgttccactgtactctgtcatagtttctgatcacccct</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0235800, RefSeq:Os07g0235800