Os07g0236800

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Revision as of 08:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0236800| Description = Snf7 family protein| Version = NM_001065783.1 GI:115471298 GeneID:4342791| Length = 5163 bp| Definition = Oryza sat...")
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Gene Name

Os07g0236800

Description

Snf7 family protein

Version

NM_001065783.1 GI:115471298 GeneID:4342791

Length

5163 bp

Definition

Oryza sativa Japonica Group Os07g0236800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:7653654..7658816

Sequence Coding Region

7653813..7653849,7655220..7655350,7657007..7657111,7657648..7657911,7658474..7658614

Expression

GEO Profiles:Os07g0236800

Genome Context

<gbrowseImage1> name=NC_008400:7653654..7658816 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:7653654..7658816 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagtttcttgttcgggaagcggaagacgcctgctgagctcttgagagagaacaagagaatgctggatcgatcaataagggaaattgaacgagaaagacagggattgcaagcccaggagaaaaaactcattactgagattaagaaaacagcaaaggaaggccagatgggtgctgtcaaagtaatggccaaagatcttattcgaacacggcatcagatcacaaagttttaccaacttaaatctcagcttcaaggagtttctctaagagttcagacgctgaaatctacacaagctatgggtgatgccatgaaaggtgttacaaaggctatgggtcagatgaacaggcagttaaatctgccaggattacagaggattatgatggagtttgagcgacaaaatgagagaatggagatgacgagtgaagtcatgggggatgctatagatgatgctttggagggagatgaggatcaagaggaagaaactgaggagcttgtgaatcaagtccttgatgaaattggcattgatattaaccaagagcttgtaaaggccccttcggctgccgtcgctcagcccgcagcagcaggaaaggttgcgcaggctgaatctgctggtgggaatggtgacggtggaatcgacgcggatttgcaggcgaggctggacaatctgaggagaatgtag</cdnaseq>

Protein Sequence

<aaseq>MSFLFGKRKTPAELLRENKRMLDRSIREIERERQGLQAQEKKLI TEIKKTAKEGQMGAVKVMAKDLIRTRHQITKFYQLKSQLQGVSLRVQTLKSTQAMGDA MKGVTKAMGQMNRQLNLPGLQRIMMEFERQNERMEMTSEVMGDAIDDALEGDEDQEEE TEELVNQVLDEIGIDINQELVKAPSAAVAQPAAAGKVAQAESAGGNGDGGIDADLQAR LDNLRRM</aaseq>

Gene Sequence

<dnaseqindica>160..196#1567..1697#3354..3458#3995..4258#4821..4961#gcaaactactcctcctctcctcctagcgaagagaagggaaagggtagcgaagccgccatcggcgtcggcgagcgaggagaagccaaattcctctactcgatccgagctccttcgattcgatccacctcgtctcggttcctctccaccccgcctgccaagatgagtttcttgttcgggaagcggaagacgcctgctggtaagatatagatcctctcccagcccctcgaattcgcgtggattggttcggttaacttcggcccgtgcgcgcgcgcgcaagaatttcttgcgtgtttttgccttttgatgatgtgtggaggtagagattagtaatagctggccgctctgacagttctgcggctgaagccccagggtaaataggcttcttgatgcctctttggtttatagggatcgggaatttcaggtcttcatgagttgttgtttcttagttgttaggattgtattcgccttagatgctaggagcaaatcgatataccgtattgtcatcgcgagattgcttgttagatgataagaaaaaggatattaacatcattgctgtatagtaataactagtcttaacctgcaagcaggctgctctagccttgggggttcgcgcagctttttacgcctacgttaataggccggtgcactcgggaactggattgccagtgatagatttgaaatcgctacaattactagtttattctataaaatcgttttttgatttgataggattttatctgtagaaaatgaactaatttggtctgatgaccactagaagttgatgttctggattatgatcttgaaagtaacagtaatggacactggctggtgaggcagagtgtttgcatttgtaatctggtatgtatgtatttagtatttcagaaacatagtttgtttttttttttcgagggagaagcatagtgcttatttgacttttttcctctgatgtttctttgtcaagctaattttgttcatccgtacaaacataacggatctttctgaagagtgtggatgacaagattctactaggtcatgaacaaagtttagaataatagcacctgcatgcgtcttagagtagtactataccatcatttttctaagtgctaactgttttgtagaattatttgtgtaatcaagtactccactacaactattatctgtcttgctatgtgtaaaaaactggatatgcgtatatgtggtgtccatgtatttgttttagactgaaacttcagtagtatctatcagattatgaatgtgcatagtcttctgaatatggaagcctatttgttgaggagtaccagtaattgaaaccattgtgaatatgagaccactgttttggcatattaccatgctttctaagttgtgtgatgcaattgttaaaagccagtcatttttttgtattattttctgtttcaacttctatagagagattaataatgtccaggtcagcctttatattacttccaagctattgtatagtattagattgaaatacaaaaagtgcaagtattaacatttttttgtgtatcaaatggcttatggttttttctcaattggttctttcagagctcttgagagagaacaagagaatgctggatcgatcaataagggaaattgaacgagaaagacagggattgcaagcccaggagaaaaaactcattactgagattaagaaaacagcaaaggaaggccagatggtatgaactctggaatttaagaatgtgaattaaattttctattattcttgttcttgtgcagatgccttctttcgtattcggtgacacagttcactttatttatttgttttattatttttcttaacaagttgatttctgcatgttgagatttaatatgaatgtgttttataatcatgctactaattcggtgctgtatatcataatcaaagaactgctatcactagatcaagatttaacattggaaatttatcaacgacaagatcacagaggtgatgtttctgaggaataattttcggtgctggctttgagaatgaaatatttgtcgagtggcctaccatcttattgtgattcttaggcctccattggaacgtgggattttttttattcatgtggtgtcctcctgcattccaaataaggcctttaccggtaatatggaaatagccctactttaccgtaatggctatactggtttactggttggtggtactaattgatatggtttgctggttggtggtactaattgacttattttgcccccttgcattagttttaatatggatcagatttccaaatagattggcatcttttgatacagaaattggataacctgccgatgaagtggtggaaggtcgtggatgaacaattccactttgctgctaaaaatggacaggttaatgttgaaggatttgtcagcatgttttgctagatatcattcatggactaagagaagcaggaaggctgcatcgaatatctcaagcagtagtgtgaaattaccttggtatactataaccaagaactcttaaacacgatatctaattgaatatctcaagggtagcaagaacagtcgttcttcatgtattggaaataaatgactctaaactgatatgtggaaataataggctgttcaaataagaggtatattttgggtcatgtgtagcttctctctgcttgcaaaatactattttcacatgatggaaggatggttaagtctttgagcttgcagtccccaaattgctcactgaatcggacataaaagagccccagacacaatgtgatatttctgcagcatccttggtatcattgatgaacatgttagaatttactaaacaaccaacactaatcttttctttgaaaaggttttacttctcagttatcatgtccttcaccttttaatcccctacaggcatgaaccaacaatgcactgcatattctgacacagatgcctgtatactttactggctagtggctgttcctattgatgacctccagaaattgatattgtgatctttgtcgcatcaaccgatgaactgcacatattctatctaatacatagcgttgagcttcaagatttctcttcttctcataaagcctactgccacagcactttgatgtattccttgaccctgaagtagatgaaacaaacacagagttctaacatgttaaatttcaattttcaaatattgtcaatagtcaaatcaacataacatgaagtccttggtgcgaaatacttcgtaccttcttgtagtgcaataagtaacacaaaagcgacatggaacttatatcttcatgtagttttcttcttgtgttgtcaaataatagttatgtattgactgttctcctattactagatgctgaattttcacatgccacactcagggtgctgtcaaagtaatggccaaagatcttattcgaacacggcatcagatcacaaagttttaccaacttaaatctcagcttcaaggagtttctctaagagttcaggtaactatgcattttctcggtcattctcttgctaattcctgctctttttcagagtatgtgtatgccatgccaactggcagtgacttccagatggttgattaacttttattgatgttttatgtggtgcattataagcaataaaagtgaacatctgaattcatttttgttcataagtatatgagttgttattatcgacttatatcacaagatagaactaaaaatattttgtgagaaatgccatttttagtagatttagtttcatgtcattaataatctagagttgctacatctccactttattaagttgtattcctactaagcagtagaagcaacatgccattaggcgtggtcaagttgtgctaaactttttttcttatagatgcatgaagttctagatatttgacacaatgggcttcagacccagacttattttaaatttcatataaaatatgtttctgttgttctgaaattttgtgctgcatccattttgtctttcaccattatccataaacatctccaaattgcaactattacagacgctgaaatctacacaagctatgggtgatgccatgaaaggtgttacaaaggctatgggtcagatgaacaggcagttaaatctgccaggattacagaggattatgatggagtttgagcgacaaaatgagagaatggagatgacgagtgaagtcatgggggatgctatagatgatgctttggagggagatgaggatcaagaggaagaaactgaggagcttgtgaatcaagtccttgatgaaattggcattgatattaaccaagaggtatgtgtttcttttgcttttgtgttatgttttagtgagatcagtgtggaggttagaattatcatgaaagcagtagttatgcttttggttctaaattaaaaaagaaaagaaacttatgccaaggagatgccaataaatattggattgcttatattatattgagaaaataataacaaatattggattggtccaacagatgtccacaaccaagtatatttgatcaagccaaagtccacctgcaaaaaatctctctctattcaacagacaactttgttcatttgtacctttattagtagtttttactgaatagaactcagccctattcagctcctcacaattattatagaaacagttagaacatccagtttaaactataaattatgtaaaaagatcagggtgattgtatctgtaggactagggtgacaaaacttcacgatgcttttgcgcactgagacctggcgtgctgccctgcctgaaattgcctctagtaaaattgtctttgcatggccgagttgtgtagatggtaacaaaaatcatatcatgtttcctgttatttttgcagcttgtaaaggccccttcggctgccgtcgctcagcccgcagcagcaggaaaggttgcgcaggctgaatctgctggtgggaatggtgacggtggaatcgacgcggatttgcaggcgaggctggacaatctgaggagaatgtagatttccgaccggtgctgtgctgcactaactaaaaaaagagtgctagtgccttgtagcaccatatcttgtgaatatgtattttctactaaaagatttgcaagtgtacttagagatttggaaatacatactcgatatgtggtatactttatactaataatgatcgatgagcaacctctttgctccgatgtgtcattcttcttac</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0236800, RefSeq:Os07g0236800