Os07g0240200

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Revision as of 08:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0240200| Description = Similar to Beta-1,3 glucanase precursor (EC 3.2.1.39)| Version = NM_001065797.1 GI:115471326 GeneID:4342805| Length ...")
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Gene Name

Os07g0240200

Description

Similar to Beta-1,3 glucanase precursor (EC 3.2.1.39)

Version

NM_001065797.1 GI:115471326 GeneID:4342805

Length

2038 bp

Definition

Oryza sativa Japonica Group Os07g0240200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:7818937..7820974

Sequence Coding Region

7818973..7820019,7820092..7820328,7820455..7820541,7820785..7820919

Expression

GEO Profiles:Os07g0240200

Genome Context

<gbrowseImage1> name=NC_008400:7818937..7820974 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:7818937..7820974 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccgccgtcacggcatgtggacgcggtcgccgccgttctccctgtcctcctcacgatccttctgccttccgccgccgcaatcggcgtcaactacggcaccaagggagacaacctgccgccgccggccaccgtggcgaagttcctcgcgaaccgcacccgcatcgaccgggtgaagctgttcgacaccaacccggacatcgtcaaggccttcgccggcacgggcatcacggtcatggtcaccgccggaaacggcgacatcccgacgctgggcaccaaggacggcgccgccgcctgggtggcggcgaacatcgcgccgtactacccggcgacggacatctccctcgtggccgtcggcaacgagatcatcaacacggcggacaacgccctcatcggcggcctcgtcccggccatgcgcaccctcagggcggcgctcgtcgccgccggcttccggcgcatccgcgtctcgacgccgcactccctcggcatcctgtccgtctcctcgccaccgtcggcgagccggttcctcgacgtcctcgaccgcaccttcttcgcgccgatgctggagttcctccgcaagaccaagtctccgttcgtcgtcaacccgtacccctacttcggctacaacggcgacacgatcccgtacgcgctggcgcggcgccccaaccccggcgtgctcgacccgggcacgggcatcacctacaccagcatgctcgaggcgcagctggactcggtgttctcggcgatgaagaagctggggttcgaggacgtggacatcacggtgggggagaccgggtggccgaccaaggcggagcccggacaagccggcgtgagcgtcgccgaggcggcggagtacaaccgctacctcatcggagaggccagctcggggtcggggacgccgctcatgccgaagcggacgttcgagacctacatcttcgcgctcttcaacgagaacctcaagccgggtcccatcgccgagcgcaacttcggcctcttcaagcccgacctcacgcccatgtacgacgtcggcctcatgaaagacacggggaagtcatcagcgtcggcgccggcgccggcgaagggcggcaatgccagcggcgccgccgtgacgaagcgtgactcggagtcggaggccgccgcgccggctgatgaggcgagtgcgcccgcgccgtcgtcggtggggaagaaggtctccacgaaggccaccgcgccggcaccgtcggacgacggctcggcctcgccggagccatcggagggcgaatcggccgacgagaagaatccggaggaggaggaggaggaagagggggatgatgccgccgcgacgacgacgccggggggcgacggcgactcgccggagacggaagccgcgggtgatgatgctaaagagagcgagggaaaaaacaacccccatggccatggagattcttcagaagctatcagtgttatgttctctgtaccttccatgcttacaattgctctgtctgcaatacttcttcatctctaa</cdnaseq>

Protein Sequence

<aaseq>MAPPSRHVDAVAAVLPVLLTILLPSAAAIGVNYGTKGDNLPPPA TVAKFLANRTRIDRVKLFDTNPDIVKAFAGTGITVMVTAGNGDIPTLGTKDGAAAWVA ANIAPYYPATDISLVAVGNEIINTADNALIGGLVPAMRTLRAALVAAGFRRIRVSTPH SLGILSVSSPPSASRFLDVLDRTFFAPMLEFLRKTKSPFVVNPYPYFGYNGDTIPYAL ARRPNPGVLDPGTGITYTSMLEAQLDSVFSAMKKLGFEDVDITVGETGWPTKAEPGQA GVSVAEAAEYNRYLIGEASSGSGTPLMPKRTFETYIFALFNENLKPGPIAERNFGLFK PDLTPMYDVGLMKDTGKSSASAPAPAKGGNASGAAVTKRDSESEAAAPADEASAPAPS SVGKKVSTKATAPAPSDDGSASPEPSEGESADEKNPEEEEEEEGDDAAATTTPGGDGD SPETEAAGDDAKESEGKNNPHGHGDSSEAISVMFSVPSMLTIALSAILLHL</aaseq>

Gene Sequence

<dnaseqindica>37..1083#1156..1392#1519..1605#1849..1983#ggagtcagattgcgcgcgccgtcctcccccaccgccatggcgccgccgtcacggcatgtggacgcggtcgccgccgttctccctgtcctcctcacgatccttctgccttccgccgccgcaatcggcgtcaactacggcaccaagggagacaacctgccgccgccggccaccgtggcgaagttcctcgcgaaccgcacccgcatcgaccgggtgaagctgttcgacaccaacccggacatcgtcaaggccttcgccggcacgggcatcacggtcatggtcaccgccggaaacggcgacatcccgacgctgggcaccaaggacggcgccgccgcctgggtggcggcgaacatcgcgccgtactacccggcgacggacatctccctcgtggccgtcggcaacgagatcatcaacacggcggacaacgccctcatcggcggcctcgtcccggccatgcgcaccctcagggcggcgctcgtcgccgccggcttccggcgcatccgcgtctcgacgccgcactccctcggcatcctgtccgtctcctcgccaccgtcggcgagccggttcctcgacgtcctcgaccgcaccttcttcgcgccgatgctggagttcctccgcaagaccaagtctccgttcgtcgtcaacccgtacccctacttcggctacaacggcgacacgatcccgtacgcgctggcgcggcgccccaaccccggcgtgctcgacccgggcacgggcatcacctacaccagcatgctcgaggcgcagctggactcggtgttctcggcgatgaagaagctggggttcgaggacgtggacatcacggtgggggagaccgggtggccgaccaaggcggagcccggacaagccggcgtgagcgtcgccgaggcggcggagtacaaccgctacctcatcggagaggccagctcggggtcggggacgccgctcatgccgaagcggacgttcgagacctacatcttcgcgctcttcaacgagaacctcaagccgggtcccatcgccgagcgcaacttcggcctcttcaagcccgacctcacgcccatgtacgacgtcggcctcatgaaagacacggtacgtacgtccgtccgtccgtccgtacgccgcgccgccggcgagtgcaatgaacgttgttgcgtaatgcaggggaagtcatcagcgtcggcgccggcgccggcgaagggcggcaatgccagcggcgccgccgtgacgaagcgtgactcggagtcggaggccgccgcgccggctgatgaggcgagtgcgcccgcgccgtcgtcggtggggaagaaggtctccacgaaggccaccgcgccggcaccgtcggacgacggctcggcctcgccggagccatcggagggcgaatcggccgacgagaagaatccggtgcgtgccgcgcgtccgtgctcgacacgatcgacgctcattgtcgccatcaccatgcatggtttttgtggctgccgacactgactgacatatcgttgtgaaactcctttgtggcgcatcttgcaggaggaggaggaggaggaagagggggatgatgccgccgcgacgacgacgccggggggcgacggcgactcgccggagacggaagccgcggtacgtacacgcattattcattcatgatccatgtgtccatgctcgtggactgcatcgaaacgagaccattgagaaaatgagagagatgcacgcttgataatttctctttgccacctatttcgacatccttttgaattttcatagacatatatattcaatttctatagtaatggaaatttttcatggatatcttcaagaaacccttagttcattaactatttttcttttgttgatcttgggcagggtgatgatgctaaagagagcgagggaaaaaacaacccccatggccatggagattcttcagaagctatcagtgttatgttctctgtaccttccatgcttacaattgctctgtctgcaatacttcttcatctctaacttctcctcaactcatggtgtaacaatagtgcaaatactaacattggtttttgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0240200, RefSeq:Os07g0240200