Os07g0243200

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Revision as of 08:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0243200| Description = Similar to ADP-glucose pyrophosphorylase large subunit 2 (EC 2.7.7.27) (Fragment)| Version = NM_001065811.1 GI:115471...")
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Gene Name

Os07g0243200

Description

Similar to ADP-glucose pyrophosphorylase large subunit 2 (EC 2.7.7.27) (Fragment)

Version

NM_001065811.1 GI:115471354 GeneID:4342819

Length

6159 bp

Definition

Oryza sativa Japonica Group Os07g0243200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:8015281..8021439

Sequence Coding Region

8016804..8016905,8017409..8017469,8017543..8017649,8018278..8018382,8018460..8018546
,8018631..8018711,8018872..8018944,8019288..8019400,8019695..8019788
,8020060..8020115,8020212..8020295,8020384..8020476,8020592..8020765
,8020956..8021099,8021225..8021380

Expression

GEO Profiles:Os07g0243200

Genome Context

<gbrowseImage1> name=NC_008400:8015281..8021439 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:8015281..8021439 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacctgctcgtgggccgccaccacggcggcggcggcgcccccccgcccgcccgccaggtgccgctcgcgcgtcgccgcgctccgccgcacggccgccgcctccgccgccgccgccagctgcgtcctcgccgaagcgcccaaggggctcaaggtggagcaggcggatgcggtcgagccagcggcggcggcggcggcgcggagggacgtggggccggacacggtggcgtccatcatcctcggcggcggcgccggcacgcgcctcttccctctcacgcggaccagggccaagcccgcggtgcctgttgggggatgttacaggctgatcgatatcccgatgagcaactgcataaacagcaagatcaacaagatctacgttctcacccagttcaactcccagtctctcaaccgtcacatcgcgcgcacttataacattggcgagggggttggatttggtgatggctttgtggaggtgctggcagctacccagacaacaggggaatcaggaaagcgatggttccagggaacagccgatgctgtcaggcagttcctgtggctatttgaggatgcaaggctcaaacgcatagagaacatactaattctatctggtgatcatctgtataggatggattatatggactttgtccagaagcatgttgacaaaggtgctgatatttcagtcgcttgtgttcctgtggatgagagtcgagcttctgattttggattgatgaagactgacaagaatggacgcattactgattttctcgaaaagcccaaggatgaaagcttgaaatcaatgcaactagatatgggaacttttggtttgcgcccagaagttgcagatacatgcaaatacatggcttcaatgggaatatatgtattcaggactgatatcttgttaagacttctaagaggacattatcctacagcgaatgattttgggtcagaagttatcccaatggctgcaaaagactacaatgtgcaggcctatctatttgatggttactgggaagatattgggacaataaagtcattctttgaggcaaatcttgctctcacagatcagtcgccaaacttctatttttatgatcctgtgaagcccatattcacatctcctagatttttacctccaacgaaagtagaaaactgcaaggttctgaactctatagtttcccatgggtgctttctaacagaatgtagtgttgatcgctctgttattggtgtccgttcaagattagaaccgggggtgcagctgaaggacaccatgatgatgggggcagattactatcagactgaagctgagagattttctgaattgtctgatggaaaagtaccagttggcgttggagaaaacaccataataaggaactgtatcatcgacaagaatgctcgaattggaaagaatgtaatgattatgaactcacagaatgtgcaagaagcagagagaccattagagggtttctacattcgttctgggataacggtagtgcttaaaaatgcggtgattccagatggtacagttatctag</cdnaseq>

Protein Sequence

<aaseq>MATCSWAATTAAAAPPRPPARCRSRVAALRRTAAASAAAASCVL AEAPKGLKVEQADAVEPAAAAAARRDVGPDTVASIILGGGAGTRLFPLTRTRAKPAVP VGGCYRLIDIPMSNCINSKINKIYVLTQFNSQSLNRHIARTYNIGEGVGFGDGFVEVL AATQTTGESGKRWFQGTADAVRQFLWLFEDARLKRIENILILSGDHLYRMDYMDFVQK HVDKGADISVACVPVDESRASDFGLMKTDKNGRITDFLEKPKDESLKSMQLDMGTFGL RPEVADTCKYMASMGIYVFRTDILLRLLRGHYPTANDFGSEVIPMAAKDYNVQAYLFD GYWEDIGTIKSFFEANLALTDQSPNFYFYDPVKPIFTSPRFLPPTKVENCKVLNSIVS HGCFLTECSVDRSVIGVRSRLEPGVQLKDTMMMGADYYQTEAERFSELSDGKVPVGVG ENTIIRNCIIDKNARIGKNVMIMNSQNVQEAERPLEGFYIRSGITVVLKNAVIPDGTV I</aaseq>

Gene Sequence

<dnaseqindica>4535..4636#3971..4031#3791..3897#3058..3162#2894..2980#2729..2809#2496..2568#2040..2152#1652..1745#1325..1380#1145..1228#964..1056#675..848#341..484#60..215#tcccctcccctctcctactccgccaccttcgcccttctagaaccttcccgcgtccgccaatggcgacctgctcgtgggccgccaccacggcggcggcggcgcccccccgcccgcccgccaggtgccgctcgcgcgtcgccgcgctccgccgcacggccgccgcctccgccgccgccgccagctgcgtcctcgccgaagcgcccaaggggctcaaggtaggtggctggctagctccgtgttcgcgcgtgcgcgcgtgcgtgcgtgttgggattgcgtgagctgatctcctgtgcgttgggtgcggattcattggtttggttttgtgttttggtgtgccaaggtggagcaggcggatgcggtcgagccagcggcggcggcggcggcgcggagggacgtggggccggacacggtggcgtccatcatcctcggcggcggcgccggcacgcgcctcttccctctcacgcggaccagggccaagcccgcggtaatcaaatcacattatcctttctttacagtgtttacacgcacatttcgtcatgcatttgataagcatttcattggttgtgtgcaatagtggggatttcggttgctattgacaccattgactattggttgattgaatcgtgagatgcttacatcattagtgattgagctgtatgttcttggtacgtcaggtgcctgttgggggatgttacaggctgatcgatatcccgatgagcaactgcataaacagcaagatcaacaagatctacgttctcacccagttcaactcccagtctctcaaccgtcacatcgcgcgcacttataacattggcgagggggttggatttggtgatggctttgtggaggtaagattagtgtttgttatgaggtgaaatcgagtggaaacatgcagctgtggcaatgggtcggtgatctctaattgataatgttctacggtggtttgttttgattgttgggtaggtgctggcagctacccagacaacaggggaatcaggaaagcgatggttccagggaacagccgatgctgtcaggcagttcctgtggctatttgaggtttgtctagtgtcatctcatgatattgtactcttatcacgggatgttatcgctttcccagttttaacttgcctgatttttttacaaggatgcaaggctcaaacgcatagagaacatactaattctatctggtgatcatctgtataggatggattatatggactttgtccaggtgaacttcatgttgatattctagagcaaagattatttttgcactttatttgagtattgtaaaaaaaaaaaatctaaatgatgagttgttttgcagaagcatgttgacaaaggtgctgatatttcagtcgcttgtgttcctgtggatgagaggttattcataattgccctatctgaatcgttttcttttttttaatctgtctttattctagctagttagcaggactgtacatgctgtaattcttcacagttttagaagtttactttttgtcacgctaatcatcaatattacttgtgaatatcataatattgtattgcaaattaacaagtagacaatacacgtggatttccatatttaattgatgggtcagatgatgacatacacctctcatatttttttaaaatttgtgtcatctacttgcagtcgagcttctgattttggattgatgaagactgacaagaatggacgcattactgattttctcgaaaagcccaaggatgaaagcttgaaatcaatggtatatgcctcttcactgaatcaaagacaaatgaatactaaaaattatttgtttacacatgtttaaactgaattgttacctgaaaaaggtgtaaaatgaatgcattccatcacctttaattgcatatgttaaatcatccacggttttattcacaaggcttttgttttgcttttgtgaatgttatctagattattggagatttgttctttatttctttatcattagctcaatttccttgatttattggctctaacgaataagtttttaaataatctaagatatttattaatgcagcaactagatatgggaacttttggtttgcgcccagaagttgcagatacatgcaaatacatggcttcaatgggaatatatgtattcaggactgatatcttgttaagacttctaaggtaaatgctaatgattaagactaaggtaaattctaatgataatatctcatgagcaatgctttccttaatcttggaaactaggtttgcatgataaataaatgttccagttgcattgtagttttatcttctatatcaagcatttggtttctgtaactttattttctgatgcatggcaaagtcaaatgtgcaaaaataacaaatggtttgttatatatgataagacatactgttggttttatttgctgagatagcattcctgggattgtctgcactccttggttcttatttttcttgccagtttgaggtatgctgatactctttctctttgttctgtatcttttagaggacattatcctacagcgaatgattttgggtcagaagttatcccaatggctgcaaaagactacaatgtgcaggtatttacaacttcataatccttcaaactgtatgtacgcaagaaattccattgtcataaatcaaccgttagaaattcttcaaatcccaaaatgagcatgtgatcttacttttcacaaaaccctgaatatgaatgcaatattccttgttctgtggtgacaggcctatctatttgatggttactgggaagatattgggacaataaagtcattctttgaggcaaatcttgctctcacagatcaggtttacttttttagttaacatcatctccatctatatctttatgtgcgtggacaatttatctaaattcagttatcttctttgtagtcgccaaacttctatttttatgatcctgtgaagcccatattcacatctcctagatttttacctccaacgaaagtagaaaactgcaaggtcagattctcttagagatggtttctttggttataccttcagtagcagctttttttgatctaaccatttacgtgcaggttctgaactctatagtttcccatgggtgctttctaacagaatgtagtgttgatcgctctgttattggtgtccgttcaagattagaaccgggggtgcagctgaaggtgaattgttgaatactcataattcaatgtacttgacagttatttggaactcataagtttgccattcaaataattgaggcagagatggatgaaagcataccaatacagaatcttaggaactaagcctgcacgaacaatcttcggaaattgtatttaaagagaaaatactgtttcccaaatcccaatgctagataaaccagagataaattagtcttttttctaatattttggccatttggatacaatccatttattttagcttctattatcattaacattattagaaccacaggaaacaggttgcaagttccatttattttcccttgatcacagtgttctctttttttcttcaatacctgcatttactgcagtctcgccatgtcctattgatgccatgcgagttttttcccctagttttgttggcatttatgcccttaaccatgaaagatttgcacatagtttttaaaccacagaaagtacatttagtcataccaacttatgctgaagcaatcactaagtaccctacatgttggtaatggtctaatggattttttttttcatttttattgaacaatggatgtttaattatttcaatatcgttaacaaaaagaaaatcaactgggtataggacaccatgatgatgggggcagattactatcagactgaagctgagagattttctgaattgtctgatggaaaagtaccagttggcgttggagaaaacaccataataaggtcagtatgagcaatgatgcatatatgtatttggtaacttgcctgttatgtaatgctaagttttgacatacaggaactgtatcatcgacaagaatgctcgaattggaaagaatgtaatgattatgaactcacaggtatgacccccatgcataagactatttcttagtatcattgtctaggagagccttctggattcttctttgcaatgatctttataacatttgcaagctcatttccacaaccgtttagtgaagataagatgactccattaaattcattcacttcattgagcatgttggttttatggaattcgaaatttgtaacaagtatgtatcgcaggagcaaggaaaaaatgcactttttggaaaggtagcaaagtatgtattagtgttaatgtctacttagagaaaaaaaaagcctcatatctccttagataagaatggtgggaggaaaattcattcaatctactaaagcgctctttcaacctatttggccttcattgcacatagttcatcgtagcagcttttgcaacttgcttgtctatgctattaaatatatatgcagtttttctttagtcattaagtttacagttcaaatgctgagacctaagagttttcccttgcttgtgtgaatgcagaatgtgcaagaagcagagagaccattagagggtttctacattcgttctgggataacggtagtgcttaaaaatgcggtgattccagatggtacagttatctagagaatcaccaaaggaaatatttgcaggtgagtttctccaaatgctttattcaattaggattataaaaatatcagttcgattggacaaaagcgcaccattctgaagtttggtagacaagaaatgctcctcgtaaatgttggtatcaataaacaagaatatatacgcacacaataaacaaaaaaaaattccaaagctgtttattgtttacaacacctgaattgcctatgtggtacggtattttcttctgcaaactaacaagatgcataatcattttgatattgatagctggaaggatattatagatgtccaactactccatatacatgttacatggcttataatagaaaagttctgccactaagcttagcatagatattgtggatgttcattctagaaagtttctttatcttgtttatgactcctttgtgaggacagtaacatattcttttgataggagtttaacgacagctaccatattctcaataacctcccacacactgcatagtagatttattgtcccaaaaacaatttcacggtatttggtgtgacatggaatttagatactatgacttggatgactgttcaaaatttcaaataactcagaacttaggtctgatatgtcggtcatatctggatctgtagtaccgtgagatatggcatgagcacgagtttatttgtagctctcagatctagaatgtccaaacatcaactttcataaaattagttgatccgaggtgtgtttatggttttttttctttttgtgagaggaggtgtgtttatggttattacatggatttccaacttcaatcatgactgagtttttgttaacttctcggggttggccttttctttttttagtctgtgcatgaacaaagaaagacattaaaattaagttaccaaatagtttttgtcattgtagtatgtacaggactttgtcaggatccattaccaacttactggatgtgtagcatcatctattgcttttaaatacaaatcttgctacttgcagatatcaatcccttctggtttgttgcatttgaagtacatctttgaaactcataaggggatctgagttcgaccttcaacgtcgatgcagcaaataaacttaatacagtgcaaaggttgccagcttatgaatgaggctaggaactgagggatatatcacctgcatcggcatggcaagaacgttttggttctttcgtaagcgtcaaaagcaatatatcaagaacttctgccatgcacatgaatacaggatatatataatacttagaaatatttcatgtcggtaattgtatatgcatgtagaagcgagagggtataatctgttgtgagttaaatgtgattacattgagtaataataattacttgtagaagaagtacatttctgtcacgttgtagggtttatcttgtaccgcaaaaaatcactgactgttgcttatccatgaattaacttcctctgatgtatatttatatttgtgaattatcaagagatcgaaataaatactgtactactctttgattga</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0243200, RefSeq:Os07g0243200