Os07g0245100

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Revision as of 08:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0245100| Description = Similar to Cytosine deaminase (EC 3.5.4.1)| Version = NM_001065816.1 GI:115471364 GeneID:4342824| Length = 2499 bp| ...")
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Gene Name

Os07g0245100

Description

Similar to Cytosine deaminase (EC 3.5.4.1)

Version

NM_001065816.1 GI:115471364 GeneID:4342824

Length

2499 bp

Definition

Oryza sativa Japonica Group Os07g0245100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:8107798..8110296

Sequence Coding Region

8109171..8109246,8109389..8109579,8109731..8109835,8109923..8110111

Expression

GEO Profiles:Os07g0245100

Genome Context

<gbrowseImage1> name=NC_008400:8107798..8110296 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:8107798..8110296 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gttacttttcctgtagttgtggagtcaaaggatggaaccatctcagttgcttctgcatttgctggtcaccatgaagctgtgcaagatagagaccacaaattcttgacaaaagcagttgaagaagcgtaccggggagttgactgcggtgatggaggcccctttggagcagtcgttgtccgtaatgatgaagtagtagtcagctgccataacatggttctgaagcatactgatccaactgcacatgctgaagtgactgcaataagagaggcttgcaaaaagctcggaaaaatcgagctctcagattgtgaaatttacgcgtcttgtgagccatgcccaatgtgctttggtgcagttcatctctcccggatcaagaggctggtgtatggagccaaggcagaagctgccattgccattggatttgatgacttcattgcagatgctctgagaggcactgggttttaccagaaggccaacatggagatcaagaaggctgatggcaatggagccctgattgcagagcaagtctttgagaagaccaaggagaagtttcagatgtactaa</cdnaseq>

Protein Sequence

<aaseq>VTFPVVVESKDGTISVASAFAGHHEAVQDRDHKFLTKAVEEAYR GVDCGDGGPFGAVVVRNDEVVVSCHNMVLKHTDPTAHAEVTAIREACKKLGKIELSDC EIYASCEPCPMCFGAVHLSRIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKANME IKKADGNGALIAEQVFEKTKEKFQMY</aaseq>

Gene Sequence

<dnaseqindica>1374..1449#1592..1782#1934..2038#2126..2314#aacacccgccacaagctaagctagagcacgagggtcaggcaacgcgtttctctctcgctgaaaagtttgctggatttgctcctctccctctctccgccatggaggaggcccagtgtacgtctctgtctcccttctcttctcttcatctgttcatggtgagtttgattggtggtgtggtgtggtgtgggactctgaggctgtgattgattcgattctgggcgctctctctctctctctctcgctgctttgggagtatcgaaaccgagaatcgggatcggttcttgatcctgttctgttctgttatgttctgggtgtcatggggcagagccccattgggatgtgtgatctggtgtttgagggggagaggttgttacaagctgtttgttgtttcttgctgcctgaattctcggatgaatttggcactgttcttcgttagaatgcacgatgctcgtttgagatctcgtggatagccaataatcatgccgaccaaatcaggattagtataaactctgagaattccggtgaccaccgggttcgattctccatattttgtggagctttttctgttgcaatcgttgttcttggggtcccaaatctgaaacctttttgcgctcgcttaatacttttttttaatgtccattttcaccggaatctgccaaaataaacgcacgttggcgactttattagagggttggtggatgtagatgctcttttttttttctttctctttgacaggaagatgcgtgtgagctgtggcaatgtcattagaaaagtacgcctttttcttgcgtgtaggttgttctgttgagagaaagaaaaaactgatgagaagactatctcgggctgggcatcgcatctttagaattgattgagtgatcaaccggatcaagtaggatatccttgtgagttggcatccctatcacgccatataaggcaaatgcagaactcgtgttcggctggaaacaactgaaagtagatgagagcgatgtcatgctgtctaccggttgtcacagtaactctgttctattgatatgcgtgtaccaactggccgttgatgcctttggatggaaagaagaatctgcttttatgtttctctgccttcttggcatttgtagtatgtctttgacaagtaacaactaatctgcctttctggacttcttgcctgatttagtttggggtaaattgcaatactccggatgttcagagacaataagagaatttactcgaattgtcaatcagataacgtttggtagcgatcactatacttttagtacttgttgttaaacttcgttgaaggttctactcttttaggtctctctgcttatgaagttgccaatgatcatgtcctcaatatgtaaaataagctaaaataagttacttttcctgtagttgtggagtcaaaggatggaaccatctcagttgcttctgcatttgctggtcaccatgaaggtaagagtaaaataatgcttctgcattagtcttctcagtttgatctgcagcccagctttcactgtttgggtgatttggggcgcttttaaggtcttccagaagaactgcttagtgttaacttgagttttggaaaaatttacagctgtgcaagatagagaccacaaattcttgacaaaagcagttgaagaagcgtaccggggagttgactgcggtgatggaggcccctttggagcagtcgttgtccgtaatgatgaagtagtagtcagctgccataacatggttctgaagcatactgatccaactgcacatgctgaagtgactgcaataagagaggtgaaatgctttatttatctgtcactgctcgtaaatcatttgttcatgagaatatgtgtatccgtttgggccttttgcgtgttaaacttcgaattgtttaccacaccattttcggatagctactcacattgtcgttctgttaaattttcaggcttgcaaaaagctcggaaaaatcgagctctcagattgtgaaatttacgcgtcttgtgagccatgcccaatgtgctttggtgcagttcatctctcccggatcaaggtctgcacccgtcaattttcctacgcataacctcatcacaaatatctgacgattttatttaacacaactgctaattcttcactacagaggctggtgtatggagccaaggcagaagctgccattgccattggatttgatgacttcattgcagatgctctgagaggcactgggttttaccagaaggccaacatggagatcaagaaggctgatggcaatggagccctgattgcagagcaagtctttgagaagaccaaggagaagtttcagatgtactaatgtgcaggatagagtctcagatacgccaaagtccccctgatgatctagggaggaataaaactacaatgttcagcttttccattatttctcaaactgccaattcaaatgtattttcatcctgataacatttcaattgtctgcatgttaatatcattcaatgaatgggtacctacagaaacaattgc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0245100, RefSeq:Os07g0245100