Os07g0247000

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Revision as of 08:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0247000| Description = Pectinesterase inhibitor domain containing protein| Version = NM_001065821.1 GI:115471374 GeneID:4342829| Length = 1...")
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Gene Name

Os07g0247000

Description

Pectinesterase inhibitor domain containing protein

Version

NM_001065821.1 GI:115471374 GeneID:4342829

Length

1543 bp

Definition

Oryza sativa Japonica Group Os07g0247000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:8223191..8224733

Sequence Coding Region

8223269..8224354

Expression

GEO Profiles:Os07g0247000

Genome Context

<gbrowseImage1> name=NC_008400:8223191..8224733 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:8223191..8224733 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatggctcgctcccagcttgccgccgtgttcctcgccgtcctcgtctcggtggcgccgctcgccggcgcggcggacaacctccaggacgcgtgcaaccggacgctgttccccaaggtgtgcatccaggcgctgacgacgaacccggagagccggacggcgaacgcgcggcggctggcggagctgtcggtgtacgtggcggcggaggtgggcacggcggtggcggcgttcgcgcaccacgagctgaacggcgtgaaggaggacgccctgttcaagtgcgtggacagctgctccgacgacatcgaggaggcggtggcgcacctcagcgcgctcacccgcgagctcaccgacgccaagttcctcgaggtcaaggcctggctctccgccacgctcggcggctcctccacctgcgaggacacctgcaaggacgcccccatcagcgagatcaagaacgccgtcgtcaccaagagcctcgagttcgagaagctcctccgcgtcacgctcgacctcatcaccgaggcctccggctccatgtccgccgacgtcgccctcccgcccgccaccggcggcggcggcggcggctatggctatgaatccagcagcgccgccgccgcgccggcgccttccgagtccgactccgacgtcggctccggctcaggctccgccgccagcgcgccgggcccgagcccatccgacgacaccggctacggcggctcctccggcagcccatccagcagcccatccagcagcccctccagcagcccctccggcagcccctccagcagcccctccggcagcccctccggcagccccgccggcagccccgccggcggccccaccgccggcggccctgcatctggaccgtcgtcgtacggcgccgcctctggccccgccgaagggccgtcgtcgtccggcgccgcctctggccccgccgaagggccgtcgccgtccggcgccgccggccccgccgaagggccctcgtcgtacggctccaccgaagggccgtctccatcgccgtcgtcgtccggctccgccgacgcgccgggacccggcgccagcgcaccggattccgaggagtactga</cdnaseq>

Protein Sequence

<aaseq>MAMARSQLAAVFLAVLVSVAPLAGAADNLQDACNRTLFPKVCIQ ALTTNPESRTANARRLAELSVYVAAEVGTAVAAFAHHELNGVKEDALFKCVDSCSDDI EEAVAHLSALTRELTDAKFLEVKAWLSATLGGSSTCEDTCKDAPISEIKNAVVTKSLE FEKLLRVTLDLITEASGSMSADVALPPATGGGGGGYGYESSSAAAAPAPSESDSDVGS GSGSAASAPGPSPSDDTGYGGSSGSPSSSPSSSPSSSPSGSPSSSPSGSPSGSPAGSP AGGPTAGGPASGPSSYGAASGPAEGPSSSGAASGPAEGPSPSGAAGPAEGPSSYGSTE GPSPSPSSSGSADAPGPGASAPDSEEY</aaseq>

Gene Sequence

<dnaseqindica>79..1164#gcctcaaccactacaacacaaaaagcgagagagatctctcccgagctcgatccggtccaccgcgacacgaagacgaccatggcgatggctcgctcccagcttgccgccgtgttcctcgccgtcctcgtctcggtggcgccgctcgccggcgcggcggacaacctccaggacgcgtgcaaccggacgctgttccccaaggtgtgcatccaggcgctgacgacgaacccggagagccggacggcgaacgcgcggcggctggcggagctgtcggtgtacgtggcggcggaggtgggcacggcggtggcggcgttcgcgcaccacgagctgaacggcgtgaaggaggacgccctgttcaagtgcgtggacagctgctccgacgacatcgaggaggcggtggcgcacctcagcgcgctcacccgcgagctcaccgacgccaagttcctcgaggtcaaggcctggctctccgccacgctcggcggctcctccacctgcgaggacacctgcaaggacgcccccatcagcgagatcaagaacgccgtcgtcaccaagagcctcgagttcgagaagctcctccgcgtcacgctcgacctcatcaccgaggcctccggctccatgtccgccgacgtcgccctcccgcccgccaccggcggcggcggcggcggctatggctatgaatccagcagcgccgccgccgcgccggcgccttccgagtccgactccgacgtcggctccggctcaggctccgccgccagcgcgccgggcccgagcccatccgacgacaccggctacggcggctcctccggcagcccatccagcagcccatccagcagcccctccagcagcccctccggcagcccctccagcagcccctccggcagcccctccggcagccccgccggcagccccgccggcggccccaccgccggcggccctgcatctggaccgtcgtcgtacggcgccgcctctggccccgccgaagggccgtcgtcgtccggcgccgcctctggccccgccgaagggccgtcgccgtccggcgccgccggccccgccgaagggccctcgtcgtacggctccaccgaagggccgtctccatcgccgtcgtcgtccggctccgccgacgcgccgggacccggcgccagcgcaccggattccgaggagtactgagcgacgtacggcgcatgcatggctacacagatttttccttcttcatatcaccatttctttttctccagtcttctttgaataatccgttgacactagcgaagattatgatgggttgatcattaagcctacgtagaaaatccattgacataattattacaatggtgtatggggaaaaggggaaaaatattagtatggtttatgaggattatttcggatcaagaaatgaggcccatataggagagatggcatgtggccccaaatgggagatttttattttattttatttttttgggaaaaggagattttttttattattattgtaatattgttatatgttgtattggttttctttgatgaaattatatctgttctaagtgct</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0247000, RefSeq:Os07g0247000