Os07g0248900

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Revision as of 08:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0248900| Description = Hypothetical protein| Version = NM_001065824.1 GI:115471380 GeneID:4342833| Length = 3192 bp| Definition = Oryza sa...")
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Gene Name

Os07g0248900

Description

Hypothetical protein

Version

NM_001065824.1 GI:115471380 GeneID:4342833

Length

3192 bp

Definition

Oryza sativa Japonica Group Os07g0248900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:8307926..8311117

Sequence Coding Region

8308683..8309789

Expression

GEO Profiles:Os07g0248900

Genome Context

<gbrowseImage1> name=NC_008400:8307926..8311117 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:8307926..8311117 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aatatttctccattgttttgcttatcctgtaggaatgaccaaggcttcttgacagccattattaaggttgagtcttattttaccacatcgcttttgggtcaaaggacatatgttaagggaaacaatgtcaaaatttctatcgaaagggataggtattcgatgcttgcgctagttgacgatgtaggggaaaattttaactgggggccaaatcaatacatcggcttttggaaattgggtgatgtgtcaactcagagtaaagtagagataaccacagattcacaattgctagattggttggataagggtaatcagcacggggttgtcaatattcatgccattgtcaatgattttggtggtccattgcaagttgaaccttcaccaactaaaagaaggtgccacccatctgtgaggtattctattccatgtactccaccactatttactgacctattggttgatgctacgccactaacactgcctgagagttacaaccatcttgagaactccatccaaccagtaccatccacccaaaatgagagcaccacccatccggagagcacttcacatcctgatgatgaagccacatcccctattaaaaagagtgcaaagaaggttgtaaaaaagtgtgcaaagaggaggagccaagacgatgacgatgatgaagaggtttgggatgatgagaaggaagagaacgaagaggaggagccccagctatgcccaaattgtgacccactagaggttgatagtgatagcagctatgatagtgatgcagcagcctcctctgactctgaatatgattgtgatgatcttgatgaccaaatacatgatgacgatgacaatgactctgaccttgagcatgtgtttgcatatgattttgataacccatgtattgatgaaggagaggtgttcgcagatactactacttgcaaggaagctgttacacaccatgctataatccatgactattcttttgaaactgagaaaaaggacaagcagagtgttgtcgaaatgacaactgcatacgtcgaaagacgtgggctaatcagcgatttattctatcaaatggctatggaaggattatggctatatatgcatctatctaaatag</cdnaseq>

Protein Sequence

<aaseq>NISPLFCLSCRNDQGFLTAIIKVESYFTTSLLGQRTYVKGNNVK ISIERDRYSMLALVDDVGENFNWGPNQYIGFWKLGDVSTQSKVEITTDSQLLDWLDKG NQHGVVNIHAIVNDFGGPLQVEPSPTKRRCHPSVRYSIPCTPPLFTDLLVDATPLTLP ESYNHLENSIQPVPSTQNESTTHPESTSHPDDEATSPIKKSAKKVVKKCAKRRSQDDD DDEEVWDDEKEENEEEEPQLCPNCDPLEVDSDSSYDSDAAASSDSEYDCDDLDDQIHD DDDNDSDLEHVFAYDFDNPCIDEGEVFADTTTCKEAVTHHAIIHDYSFETEKKDKQSV VEMTTAYVERRGLISDLFYQMAMEGLWLYMHLSK</aaseq>

Gene Sequence

<dnaseqindica>1329..2435#ttcttccccaactctaccgcatcagaactcctcctctcctctcgcacgacgaaccctaaaccccaaatcctctcatcccttctctcaaatcaggagcaaatcaaccaaaaatcggtagctttgaagtattagatgccaatggaagaggtgcagatggatttcggcgagtagagcaaggcaagcaacagcttggggcgacggctgcagcgggcggcatcaggttacggtgcttgcggcggcttggggcggcacctgcagcgggcggcgtcaggctacggcgcggctaccacgcttgcggtggctccgtcgagcggcgtcaagttgcggcgcgcggccgcggcacgtggctgcagcgggtgtcggcgtcgacggtaggctgcagcgtcagctgcttcaagcggcatggtggctactgtgggcagtagtagcaggaccaccatggaaaggtatataatctatacttatgcttgtgacctgcttgttctatctatcgtgtagggatgttaccaacaatatatgtgtgtgttttgaggaattctttttgaatatttttaatccttgttcaactggttcaagagtccgaatttgctggtttgctatgcaaccttagcatgtgcatagctaaccatatcttgcttgcgtatcttcaggatataatcaagcattagcaatatctctttgtgtgaatatgttgtgcattgtaattaaacaacggcctctctaccttaggtgctgatttgaattaatagatagtgagtttaataaattaatcatcaaacaatggtagcatgaagtaatataagaaagtagccatatgtttacaaccttgttaaaagtagtttaagctggatatgtttagtactttacagtaaggtagatgtaagaatatttgtctctaacatgctttgtcaatgtaacaaccacacaaactaattttaaatgatgtctcaaattaatgtataggaagatactagtactattaaatggttgtataattaaaccccatgacttatagattatttaaataataaagttagccttataattaggtaaatcaaacatgaatacagatagatgagtctttaatttatttatgaggaataggtacagaattgttatgatagaaccacccaaataaggttgagtcggttagcatccaataattactcaaagagtaaaatcacttgtcaacccacttaaatcacatatactgtacaatccatttaaaatcatatgatatttctgttagataggtcttccatgcattagttattcagtccctgtatatttagatgtaggttttcatctattcctcgttgagctgctagaatatttctccattgttttgcttatcctgtaggaatgaccaaggcttcttgacagccattattaaggttgagtcttattttaccacatcgcttttgggtcaaaggacatatgttaagggaaacaatgtcaaaatttctatcgaaagggataggtattcgatgcttgcgctagttgacgatgtaggggaaaattttaactgggggccaaatcaatacatcggcttttggaaattgggtgatgtgtcaactcagagtaaagtagagataaccacagattcacaattgctagattggttggataagggtaatcagcacggggttgtcaatattcatgccattgtcaatgattttggtggtccattgcaagttgaaccttcaccaactaaaagaaggtgccacccatctgtgaggtattctattccatgtactccaccactatttactgacctattggttgatgctacgccactaacactgcctgagagttacaaccatcttgagaactccatccaaccagtaccatccacccaaaatgagagcaccacccatccggagagcacttcacatcctgatgatgaagccacatcccctattaaaaagagtgcaaagaaggttgtaaaaaagtgtgcaaagaggaggagccaagacgatgacgatgatgaagaggtttgggatgatgagaaggaagagaacgaagaggaggagccccagctatgcccaaattgtgacccactagaggttgatagtgatagcagctatgatagtgatgcagcagcctcctctgactctgaatatgattgtgatgatcttgatgaccaaatacatgatgacgatgacaatgactctgaccttgagcatgtgtttgcatatgattttgataacccatgtattgatgaaggagaggtgttcgcagatactactacttgcaaggaagctgttacacaccatgctataatccatgactattcttttgaaactgagaaaaaggacaagcagagtgttgtcgaaatgacaactgcatacgtcgaaagacgtgggctaatcagcgatttattctatcaaatggctatggaaggattatggctatatatgcatctatctaaatagcacggttacataccagaggttctgttgttagatggatttgggatcaagcaattaatcgcagggaaccatttgtattattattttattgatggaggctttgctttaattatgaaaatattttacttgtcacaataaattagaaaaggttaataattatccatgctttgtatgttagaattgtttaggttaatcatattatggttacagattatcccttaatgaacaatcctaacttacagttgaactataattatatgaggtcaagatttataactagtattatccaccatacatgtttgtcatatactccttggtttaatatatgctaaaggtaggttattgttattaaagggggtggctatcaatctaggaaagtggatgagtttagagacaaggaattttatacaggttcaggccttcttatttaagaagtaataccctactcctgtccggggatgattccgccgagtgtattattgattgtataaactggaaaaaagatcccgccccaagaggcacacggacccctccttatataggggaagaggtccgctttacaaaatacagtccatatcctaacggaatatgggattacagataaaatacaatcgtaaccgagtaggatcccgggtatttccttgacacacaagtttataatctaacccgagttctcataaagatattctatctatattcagtaccctgtatccagctggaatataactgccatgtagatatggggtatccataatctcca</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0248900, RefSeq:Os07g0248900