Os07g0251900

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Revision as of 08:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0251900| Description = Leucine rich repeat, N-terminal domain containing protein| Version = NM_001065836.1 GI:115471404 GeneID:4342846| Len...")
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Gene Name

Os07g0251900

Description

Leucine rich repeat, N-terminal domain containing protein

Version

NM_001065836.1 GI:115471404 GeneID:4342846

Length

6427 bp

Definition

Oryza sativa Japonica Group Os07g0251900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:8497982..8504408

Sequence Coding Region

8500584..8502041

Expression

GEO Profiles:Os07g0251900

Genome Context

<gbrowseImage1> name=NC_008400:8497982..8504408 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:8497982..8504408 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaccatgaaggttaccactgcaactgcacatttcctcttggtgttcttggcgtccaccatctcccattcagtcatctgctcagctctcggaaacgaaaccgatcagctgtcttcgctgcttgaattcaagaacgcgatcagtctcgatccagagcaatccctcatctcatggaacagcagcaaccacctgtgcagctgggagggcgtctcgtgcagctccaagaacccaccacgcgtcaccgccattgatctagtaggtctagtaggtcgcatctctccttcgctcgggaacctaacattcctcaggaacctctccctggcgacgaacagattcaccggccagattccggcgtccctcggccgcctccgccgcctccggtcactctacctcagcaataacacgctgcaagggaccataccgagcttcgcgaactgctccgagctcagggcgctgttcctcgacggcaatgagctcgccggaggactccccggcgccggcgacctgcccgtcggcatcgaggcgctggtgctctcgtcgaaccgtctcgccgggacgatccctccctcgctcggcaacgtcacgacgctgaggaagcttgcctgcatgaacaacggcgtcggcggcggcatccccggcgagctcgccgcgctgcgcgggatggaggtgctggccgtcgacggaaaccggctgtcgggtgggtttccggtggcagtcatgaacatgtcggggctcgccgtgctcggcctcagcaccaacggcttcaccggcgagctgccgtccggcatcggcggcttcctgcccaagctccggcagctcaccatcggcggcaacttcttccaagggaatatcccttcttccttagcaaatgcttcgaatcttttcaagcttggtatgtctgacaataacttcaccggtgtggtgcctgcctccattggcaagcttgccaagcttacattattgaaccttgagatgaatcagctccatgctcgtagcaagcaagaatgggagttcatggataacctagctaattgcaccgagctacaagtactctctcttgagaagaatcaaatggaaggacaggtaccaagttcactaggcaatttttcagttcaacttcagtatctttacctggggctcaatagattgtcagggagttttccttctggcattgcaaaccttccaaacctgataattctggcactggatgacaactggtttacaggttctgtaccacaatggcttggaggtctcaaaacattgcagagcctaacagtgtcctacaacaattttacagggtatgtcccctcctccctttccaatctatcacatttgatggagctttttctagagtcaaatcagttcattgggaacatacctccaagccttggaaaccttcagttccttacaacaatcgacatttccaataacaatcttcatggtagtgtgccagagtaa</cdnaseq>

Protein Sequence

<aaseq>MTMKVTTATAHFLLVFLASTISHSVICSALGNETDQLSSLLEFK NAISLDPEQSLISWNSSNHLCSWEGVSCSSKNPPRVTAIDLVGLVGRISPSLGNLTFL RNLSLATNRFTGQIPASLGRLRRLRSLYLSNNTLQGTIPSFANCSELRALFLDGNELA GGLPGAGDLPVGIEALVLSSNRLAGTIPPSLGNVTTLRKLACMNNGVGGGIPGELAAL RGMEVLAVDGNRLSGGFPVAVMNMSGLAVLGLSTNGFTGELPSGIGGFLPKLRQLTIG GNFFQGNIPSSLANASNLFKLGMSDNNFTGVVPASIGKLAKLTLLNLEMNQLHARSKQ EWEFMDNLANCTELQVLSLEKNQMEGQVPSSLGNFSVQLQYLYLGLNRLSGSFPSGIA NLPNLIILALDDNWFTGSVPQWLGGLKTLQSLTVSYNNFTGYVPSSLSNLSHLMELFL ESNQFIGNIPPSLGNLQFLTTIDISNNNLHGSVPE</aaseq>

Gene Sequence

<dnaseqindica>2603..4060#actgcaaactcgcatatgtgcacatatcaatatatcatactagtaccattctgccggcatcaagttcgggcttcgagtgcccagctaccgcgagctgtaagcttctcttctgtagtctactttcacttgttatcatgggaagtaggaacatgtcatgttattcttaagttaagcattcgcatcttttctaaatatccaaatgttgatggctgtatgaattatctacagctagttcattacaaaatataagccgtatatatatatatggttttaacgtggtcttcattattatattttgacaatttatttgtttcaaaggacatcattaacaaccagaatcatcatcgtataaaaatattttaaaatttgaatccaaaacactatcacttgtgtagttctacaagccatgcacctcatatgtatggttctacctcgatcaaaagctagtcaaaacgatcccatctcaaaccgtgttcatcagacgcatttagattgctaagcacacgtatataaaagtttatttttcagcctttgcatttagattgctaagcacacgtatataaaagttttatttacaaattacaaatatgttgtttcgcttattccacaaataaacgaaacgatgggtccgtacgttgatcaaacaagctcactacgaaggttactactgtgagtcttgtgtacgttcttggcctcgtccttccatatctagttagtttttttaaaaaaaaaaagataatgtaaatcgtttacatatctagtttttgccatagggtatatagactatagacataaaagagcattgctaaattagaaaaaaacagaatagggcgacgggacagatctcgacactccactcaaataaacgagaattcgattggaagtcatatggtccgttgattgcttataatcgaacagtctataatggattgggcggtatatatctataggaggggattaaaatgtgagccatgtattaatttaaacatggaaggaaaacactgcatgcaataaacacattgcatagaattgtaatttgaggcttagtaatccacaattttttaaacctagcaaatccctttaaatttattttcttgcacatggaaagcagcgtttacaattttggttcgaaatttcgataattttggtccccaccggcaaatcaatataccgatagaaattttcagattttctcttttttttgtggaatttggtcaaatttactcaaattcgatcaaaatctttcaaaatttcaaaaaaataatggtccgaaaagtgccgaaaatcatgaaatttggtaaaatttcggtcctaccgaaatcaaaattgtaaaccctggtggaaagtcgaaaggatctctgcaacaaaaagaaaaggggaagtcaaaagtaatatcactggtcatggactagccataggaactgccactggtgtctcatgtaagcatggactaaattatgcaatacaacgttcggtaaccaggaaggagcctataattagtcaactaatgttttcatgtatgcgtcgagtagtgaatagtttaattagaaaaggcacactactaaaaaatagttttcgctgacagtcaaaatggattttcgctagcggctagatgtgccgccagtgactaaaggcaagtgaaaataatgctggccgccagtgaaaattgagtttcgcaagcagctatgctaagacaaccgctagcaaaaataccattttggctagtggcaaaattagaccaccagtgaagacaattttggggataaaaaaaattcaaaatggtgctgccaactgccacagccgcaaacaccgccggctgctgccacaacacctcaccgtggccgccgcctgccaaagcccaagccatggtcgccaagtggtagatgggggggaggggttggagtagcctagccatcatcgtcgttgtggcagcccccatcgtcgtcgtcgtcgtggcagccgccgccggatccacctccttcaccgccgtggaggaccgcctgagcaccaccgccggcggatccgcgcccaccctcctaccaccatcgcttcccactccgttggcctcccccgttgctgtggcggcggatccttggtagccgctagcgaaaatcctattttagttgtcggtaacctataaaaagatctctatttttgcaagcagacctcttaagtgaccgccagcgaaaatcaaatttttgcaagcggttgataaccggaatccctccaattattttcacaatcgtattttcatcaaacccgacagtaaaaataaaagggtaatgctataaaaaataatttttctagtagtggcagcttgaattgggtgtaatgtatccttgagctgaaagagatgatgactagtagctttcttgtgtgcaggatttttatgaagaaaactctcaactctgtacagcgctgaaaggaagctagttttcagataatcttagcctaattaagctaaaccattcttcaggtatttcaactactaccaactgagtgtccgaacattttatacaacattgaaaatttaaactttccgatccgtttcaatgtatgaacacaaccaagatcgatcgaaattcgagcaaacaagctcgccatgaccatgaaggttaccactgcaactgcacatttcctcttggtgttcttggcgtccaccatctcccattcagtcatctgctcagctctcggaaacgaaaccgatcagctgtcttcgctgcttgaattcaagaacgcgatcagtctcgatccagagcaatccctcatctcatggaacagcagcaaccacctgtgcagctgggagggcgtctcgtgcagctccaagaacccaccacgcgtcaccgccattgatctagtaggtctagtaggtcgcatctctccttcgctcgggaacctaacattcctcaggaacctctccctggcgacgaacagattcaccggccagattccggcgtccctcggccgcctccgccgcctccggtcactctacctcagcaataacacgctgcaagggaccataccgagcttcgcgaactgctccgagctcagggcgctgttcctcgacggcaatgagctcgccggaggactccccggcgccggcgacctgcccgtcggcatcgaggcgctggtgctctcgtcgaaccgtctcgccgggacgatccctccctcgctcggcaacgtcacgacgctgaggaagcttgcctgcatgaacaacggcgtcggcggcggcatccccggcgagctcgccgcgctgcgcgggatggaggtgctggccgtcgacggaaaccggctgtcgggtgggtttccggtggcagtcatgaacatgtcggggctcgccgtgctcggcctcagcaccaacggcttcaccggcgagctgccgtccggcatcggcggcttcctgcccaagctccggcagctcaccatcggcggcaacttcttccaagggaatatcccttcttccttagcaaatgcttcgaatcttttcaagcttggtatgtctgacaataacttcaccggtgtggtgcctgcctccattggcaagcttgccaagcttacattattgaaccttgagatgaatcagctccatgctcgtagcaagcaagaatgggagttcatggataacctagctaattgcaccgagctacaagtactctctcttgagaagaatcaaatggaaggacaggtaccaagttcactaggcaatttttcagttcaacttcagtatctttacctggggctcaatagattgtcagggagttttccttctggcattgcaaaccttccaaacctgataattctggcactggatgacaactggtttacaggttctgtaccacaatggcttggaggtctcaaaacattgcagagcctaacagtgtcctacaacaattttacagggtatgtcccctcctccctttccaatctatcacatttgatggagctttttctagagtcaaatcagttcattgggaacatacctccaagccttggaaaccttcagttccttacaacaatcgacatttccaataacaatcttcatggtagtgtgccagagtaaatcttcagaattccaacaatagagcaagtttggttaagattcaataatctcagtggggaacttcctgcagaagtagggaatgccaagcagctcatgtatttgcagctttcatccaatatgttgtctggagatcttcctaatactttgggcagctgcgaaaatttgcaacatattgagctggatcataataatttaagtggaggtattcccccttcgtttggcaaattaattagcctaaagtttctcaacctatcacacaacaagttaactggatcaataccaatgttacttggtgatcttcagcttcttgaacagatagatttgtcattcaaccatcttagaggtgaggtcccaactaaaggtatcttcaagaattcaagtgccatacaaattgatggaaatctagggctttgtggaggtgcactagagttacacctacctgaatgtcctattacgccatcaaatacgactaaacgcaagccatctgtactagccatagtgattccattagctagtatggtgacacttgcattggtgatattggtcttgtttatctgtaagggaaaacaaaagaaaaactcaatgtctttgccctcatttggtagtgaatttcccaaagtttcttatagggatcttgccagagcaacaaatgggttttcaacatccaatttgattggcgaaggaagatacagttctgtataccaaggacagtcatttcagggcataaccgtagttgctatcaaggttttcagtctagagacaaggggagcacaaaaaagcttcattgcatagtgtaatgctttaagaaatgtgcggcatcgtaatctagttcctatcttaacggcgtgctcaagcattgattcaagtgggaatgacttcaaagcattggtatataaattcatgccacggggagatttgcataaattactgtactcaactccacatgatgatagatcttcaaatttgtgctctatttcactagctcaaaggttaaacattgtggttgatgtatctgatgcattggcatatctacaccacaaccatcaagggccaattattcattgtgatctcaagcctagcaacattcttttggatgatagtatgacagctcatgttggagactttggacttgcaaggttcaaaattgattctaaaacatctttgggtaactcagtttcaacttcttcattcacaataaatggaaccataggatatgttgctccaggtatatatgatccatttcacacagtattttcttaacaattaattgaagacaacagtttcataatttgtttatatgacatctaaaatgaactctcttcctgcatacgatatgtagaatgtgccataggtggtcaagtttcaactgctgcagatgtatacagcttcggagttgttctcttagagatattcataaggaagaggccaacagatgacatgtttaaggatggattgagcattgcaaaatatgcagatatcaacatccctgacaggttgctgcagattgttgatcctcagctggtacaagagttgagcctcaaccaagaagatccagttgctaccgatgaaaatgcagcacactgccttctttctgtactgaacattggactttgctgcaccaagtcatcccccaatgagcgcatcagtatgcaggaggtggctgccaagctgcacgcaattagggattccatatctcagaggttactgaatcaacatcaacactgttagttgttctgttttgtctgaaactccgaataattttcagaagacatgctgtacgccaagcaccacctctagactgagccggcgccaattcagttatatcgatggcgaccaccacaacacgtagggatctgtgctcttggacatggagcagagggtcctcatggaggagatcgtcacactactccccgtcgagagggccgtcgccacgacgaggttcgtgctcggacttctccgcaccgacatgatcctgcacactggcgtggcgtgccgagacgcgttggagatgagagccagcaaacagctcaaggaggcaacgcatgaggacctcctgatccccaacactggcaactttgtggagacgctctatgacgtggactgcatggagcggatgctggagcagttcatcgtcacagttcacgaactcgtcggtgtacgttcaccggtccgtctcgccacagatataggacgaaggctaggtggttgacgcatcctccggcgagctcatgccacggattagaacagtggccaagctcgtcgacagctactccctcattccctaaatattttacgccgttgactttttaaacatgtttgatcgttcgtcttattcaaaaatttaagtaattattaattcttttccta</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0251900, RefSeq:Os07g0251900