Os07g0258800

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Revision as of 08:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0258800| Description = Conserved hypothetical protein| Version = NM_001188195.1 GI:297725520 GeneID:9272173| Length = 4617 bp| Definition ...")
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Gene Name

Os07g0258800

Description

Conserved hypothetical protein

Version

NM_001188195.1 GI:297725520 GeneID:9272173

Length

4617 bp

Definition

Oryza sativa Japonica Group Os07g0258800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:9024729..9029345

Sequence Coding Region

9024729..9024785,9026315..9027096,9027173..9027245,9027947..9028012,9028096..9028194
,9028710..9028772,9028877..9028950,9029039..9029345

Expression

GEO Profiles:Os07g0258800

Genome Context

<gbrowseImage1> name=NC_008400:9024729..9029345 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:9024729..9029345 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcccaaccggcgagcgccgccgcggccgccgccgccggggaggaggaggaggaggacgccgcctgggcagacgcgctggacttcgacgactccggcttcctccgccgcggcccggcctcctctccctcccgcctccgcccccctcgccccgatgaccccgcgccggccgcctcgctctcccagggcgcggcgcgcggcctccgctccccgccccacctggcttcgtccggccccgccgcccgcggccatgccaccgaccccgacttctcgctcgccccgtggctccacgcgctgggttccctcggcgaggcgcgcgcgtggaagcggcaggagatcgcggccatccgtggcgaccgggcattgtatcgagcacgtctggtggtcggcgtggtgacgtcgtgcgcgccgaacaggctcggtgatctcttcctttctctcaaggatccaagtggtacggttggtgcttcagttcaccagaaagtatttacaaaggaggataacatggttgtatctgtagggtcttgcattgttctgaaaaatgtagctgttttccgtccatctcacaagggttgctatcttaatgtcaccaaagaaaatctagagatgcttgtgccaaaggacttctgcttcccatctaagcaagtgttttcatcaagtccttctgaaagtcaacatcctgtaaagtgtcaagaaacacgggattcttcatgccaaggagataaccgcatcaggaaaactggagttgaaacatacggacaaacaacaggtatctgccgcacgatcttaagtaccagggatgataggattgctgatgtactttctgataataattatgcaggaaatgctgttcgagatagtacgttaagaatggacaatggcagtactcaaggtgtaggaaatcacctagatacaaggatgaaggaaaaagatataaatccttcaaacaagaatacaccaagctacagtgccgatcagcaattccaaaaaactagttccagttcaggtaagcaccaagggattgaactacaaacattgatgcagcgcctcagcagcaggcatatatcaaaccacaatggtgaagagcatcaccagcaaactttgaatgatcctgaaaacccaaacacaagatgttcccagtctactctaggtggatgctcggtcatgtctagaacgggaaattctattgcagctagttctgatgaaaagctgagtcgacctcttgaaggtgaacgggtgcaccctaatagcaaaaagcaaaggggtgatgcggtattgccagataatgttatgtcaagtacgaatattgagacctatgggttagccaataatctaaacattggtctggatgatgtcgcacatcttgttgagcacgcttcaatcaaaaaacccaatgagcatcagcaaaaggacttcattactggaactttgggcattgtcctgccaactcaagaaaatagctctgatgacaatttgatgtgccagtctttgcctagcatgaacatgcaaaagcttggttag</cdnaseq>

Protein Sequence

<aaseq>MSQPASAAAAAAAGEEEEEDAAWADALDFDDSGFLRRGPASSPS RLRPPRPDDPAPAASLSQGAARGLRSPPHLASSGPAARGHATDPDFSLAPWLHALGSL GEARAWKRQEIAAIRGDRALYRARLVVGVVTSCAPNRLGDLFLSLKDPSGTVGASVHQ KVFTKEDNMVVSVGSCIVLKNVAVFRPSHKGCYLNVTKENLEMLVPKDFCFPSKQVFS SSPSESQHPVKCQETRDSSCQGDNRIRKTGVETYGQTTGICRTILSTRDDRIADVLSD NNYAGNAVRDSTLRMDNGSTQGVGNHLDTRMKEKDINPSNKNTPSYSADQQFQKTSSS SGKHQGIELQTLMQRLSSRHISNHNGEEHHQQTLNDPENPNTRCSQSTLGGCSVMSRT GNSIAASSDEKLSRPLEGERVHPNSKKQRGDAVLPDNVMSSTNIETYGLANNLNIGLD DVAHLVEHASIKKPNEHQQKDFITGTLGIVLPTQENSSDDNLMCQSLPSMNMQKLG</aaseq>

Gene Sequence

<dnaseqindica>4561..4617#2250..3031#2101..2173#1334..1399#1152..1250#574..636#396..469#1..307#atgtcccaaccggcgagcgccgccgcggccgccgccgccggggaggaggaggaggaggacgccgcctgggcagacgcgctggacttcgacgactccggcttcctccgccgcggcccggcctcctctccctcccgcctccgcccccctcgccccgatgaccccgcgccggccgcctcgctctcccagggcgcggcgcgcggcctccgctccccgccccacctggcttcgtccggccccgccgcccgcggccatgccaccgaccccgacttctcgctcgccccgtggctccacgcgctgggttccctcggtgagggtggagtggaggcggtgaccggatcagacattccgtgtttggttttgcgttttcggttgctcatcgtggcgtgggtatgcaggcgaggcgcgcgcgtggaagcggcaggagatcgcggccatccgtggcgaccgggcattgtatcgagcacgtctggtgcgtgcggagtgtggacatctcctggctctacctgtttcgctagttttgtgcgtgtctttgctgatggcttgattagtcttggggcgtttggttgtgatcaggtggtcggcgtggtgacgtcgtgcgcgccgaacaggctcggtgatctcttcctttctctcaaggtgagcgaacacaaagcatcatggcatgattatgtgtgtactgtggaatgagttggattccttggccgtagggatgcaagcggagcgggcaagcggggtttttaacccgcttatcccacttctagttcattttttcttctaaattttatactgccatatgaaaaatgaattagcaagcgggtttttatgcgggtagcgggactacccactttgcatccctacttggccgagttatcatgttcgcgtcatgcgggaattagctcgtgttaaaattggaaaaagggactttggtctttgattgatgtactggttggttttcttctgattacttatcacctcttattgcattatctgcatctcttcatgtttgcatcttacatgtagagtgggctacattaagagacattcagataagtaattaaaccgaaagccataaatattactttacaatctgagtacggaatatttattgaatgctaactgattgggaaataatggtgagttattcttgataggatccaagtggtacggttggtgcttcagttcaccagaaagtatttacaaaggaggataacatggttgtatctgtagggtcttgcattgttctgaaaaatgtaaggtgttgtggtgaaaaaggatttcttttgttggcaaactaacttagtatatggagtaattggttcattgttaatttcaggtagctgttttccgtccatctcacaagggttgctatcttaatgtcaccaaagaaaatctagagatggtactatttgcatttctttatattactatctagtataataattgccattattactatacgtgcactgcacagtagagtgaaaataatataagatgcactgatacataatgttacggaagtagacagctataatacaatgatactagagcatcagtaaaggatgaaaagaaggcactctgtgaatcttacttgtgtaaagaatcatcattgtcttctgtttttccttctcagttttttgagtgaaaatggtagagaggtatcctacaattccatgatcctgttgtttgttttattgcttctaaaactttcatgaagttaaaatacaccattagttcaagatagccacattgttcatcgatgaaaaaatcatactttattttaccattttagatcttccaaacattcttgcacatgtaattatataaatcaaaacttctggctgggaggatgtttgtccttcagattaaccatcatatttaggcctttcatgcttcagaccttgtgttaatcaagaataagcctttgcattatcagcagagttacttggattcacttgtatttcaagtctcagttctttagaagcatgtaaccatttcacaaaactttcacaatggtacttttgaactgccattacaatgttccttaaattaacatcataatcatttaaggacatggcggtatgaatgtttttatatttgcagcttgtgccaaaggacttctgcttcccatctaagcaagtgttttcatcaagtccttctgaaagtcaacatcctggtaacttccagttcatatccctttctctatattaatctcttaagaacaataatatgttacatgtattccataacagtaaagtgtcaagaaacacgggattcttcatgccaaggagataaccgcatcaggaaaactggagttgaaacatacggacaaacaacaggtatctgccgcacgatcttaagtaccagggatgataggattgctgatgtactttctgataataattatgcaggaaatgctgttcgagatagtacgttaagaatggacaatggcagtactcaaggtgtaggaaatcacctagatacaaggatgaaggaaaaagatataaatccttcaaacaagaatacaccaagctacagtgccgatcagcaattccaaaaaactagttccagttcaggtaagcaccaagggattgaactacaaacattgatgcagcgcctcagcagcaggcatatatcaaaccacaatggtgaagagcatcaccagcaaactttgaatgatcctgaaaacccaaacacaagatgttcccagtctactctaggtggatgctcggtcatgtctagaacgggaaattctattgcagctagttctgatgaaaagctgagtcgacctcttgaaggtgaacgggtgcaccctaatagcaaaaagcaaaggggtgatgcggtattgccagataatgttatgtcaagtacgaatattgagacctatgggttagccaataatctaaacattggtctggatgatgtcgcacatcttgttgagcacgcttcaatcaaaaaacccaatgagcatcagcaaaaggacttcattactggaactttgggcattgtcctgccaactcaagaaaatagctctgtaagtaacagtgatgcaactactctcagtgcatcgttgcattcacagccaaataagatggcttctgtaactgaatggacagatgatcagctatctgaactgtttgctgactattaggataggagtgaatgtctgatcaaggagctaccagatttggtacttaatttgaactggctatcttaatggttgatgcttttggtagactttagcgatttactcaggctatcacgtcacactctggtttcagataagtgcagcttcccagatcattacaacatcattatattaaattgtaattgatgttttcagtggatgagaccttctctcatcacgcaaaggagcctttgcagacaacggaattgtttgtttcaatcttgtgcaaacctgcaatccctggttaatatgataggattgaaggatcttgtcagcttgtttcactagaaacttgaatgctacttcctctattccaaattgatctacatatttcatggtatactaagaccaagaaaaactaataaatctctcatactatatttactctagcaacaaactcgatgcatgcatcattctcactatttcctagccaataacaaattaagatattacatgtgggttataaatacttgtatgcatggatgcatgcatcaatgtctatttactccaatgtacaaataacgaatagacttaataaatgaacacaaatatgtagatcatttaggaataacttcaaaaaaactatatgtagatcaatttggaatggagggagtacttctcttcagaaaatgtagccttttggtcttttagaaaagaaaaaggttagccttttgtatttatcgaaggtcagaaaagttactgctagacaatggcaacttcaatctaatggttaatggaggaaaatgcaaagaattacaatagtccttaattatgagttttgttttttgctctatttgagttatacatcacaagtaaaaaagtataattgatgtaggtgagtgggaccacttttaactgtcatttagcactctctcatgcaacttatctctggctttttgagagctcaaggccctatttcaaatgtcgagacttcaaatattcaccaaatgtaagaccactttctcatagtatttggcaaccagccgaataatatatgttcttcagctagttggaacatattttatctttttaatctcaacgccgatgaaacgtgcatgaacgtagcaatagggatggcaatgaacactaaagaaatcgatcaaggttagtagaagctagtccggttcatgcaatgttctgcactctcggaacgatgcacaaatcactacagagccctggtaatcaatttaaccgttcaacgttgcaaatagtttacacttagttttttgttcatactgagtgtgtttgatgatcatcacatatcagttgacctatatgttacataaagatggcaatagatctcattctatcagtagcgagcacacagtatcaattcaagcatatacagaaatagctgttctgcgcctacaccgcaggatgacaatttgatgtgccagtctttgcctagcatgaacatgcaaaagcttggttag</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0258800, RefSeq:Os07g0258800