Os07g0260300

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Revision as of 08:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0260300| Description = Thioredoxin-like domain containing protein| Version = NM_001065858.1 GI:115471448 GeneID:4342871| Length = 3796 bp| ...")
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Gene Name

Os07g0260300

Description

Thioredoxin-like domain containing protein

Version

NM_001065858.1 GI:115471448 GeneID:4342871

Length

3796 bp

Definition

Oryza sativa Japonica Group Os07g0260300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:9131254..9135049

Sequence Coding Region

9131301..9131546,9131652..9131717,9132433..9132513,9132589..9132642,9133414..9133482
,9133581..9133643,9134259..9134341,9134415..9134480,9134576..9134606

Expression

GEO Profiles:Os07g0260300

Genome Context

<gbrowseImage1> name=NC_008400:9131254..9135049 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:9131254..9135049 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcactcgccaccgccgccgccggagcgcaaccgttcgtccgctcctcctcctccgccgccgcggcgtcctcgtcgcggcccctgctcgccgtcgccgccgcccgccaccgccgcccgcatggatctctcgccgccgccgccgccgcggcaaggcggcgtcgtcgtcgtccgctcctccaggtgcgcgcggcaaggacggagtccacgggcgtctccgtcgggttccgcgcgccccagttcgagctcccggagccactgacggggaagctctggacattggatgacttcgaaggcaaccccgcgctgctggttatgtttgtatgtaatcactgtccattcgtaaagcatctcaaaaaagatattgcgaagctcacctcattctacatggagaaagggcttgctgctgttgccatatcctcgaactcaattgtgacacacccacaggatggtcctgattacatagctgaggaagcaaaattgtataaatactctttcccgtatctatatgatgagtctcaagaagttgctaaagcttttcgagccgtctgcacgccagagttttacttgttcaaaaaggatggacgaaggccatttgagcttttctaccatgggcagtttgacgattcaagaccgagtaacaacgtgccagttaccggaagggatttaagtcgtgcgattgattgtgcacttagtggacaagagctaccttttgtgccaaaacccagtgtcgggtgcagcatcaaatggcacccatga</cdnaseq>

Protein Sequence

<aaseq>MSLATAAAGAQPFVRSSSSAAAASSSRPLLAVAAARHRRPHGSL AAAAAAARRRRRRPLLQVRAARTESTGVSVGFRAPQFELPEPLTGKLWTLDDFEGNPA LLVMFVCNHCPFVKHLKKDIAKLTSFYMEKGLAAVAISSNSIVTHPQDGPDYIAEEAK LYKYSFPYLYDESQEVAKAFRAVCTPEFYLFKKDGRRPFELFYHGQFDDSRPSNNVPV TGRDLSRAIDCALSGQELPFVPKPSVGCSIKWHP</aaseq>

Gene Sequence

<dnaseqindica>48..293#399..464#1180..1260#1336..1389#2161..2229#2328..2390#3006..3088#3162..3227#3323..3353#gagagccaacacggtgcatctctcagccacacagccccacccgcgccatgtcactcgccaccgccgccgccggagcgcaaccgttcgtccgctcctcctcctccgccgccgcggcgtcctcgtcgcggcccctgctcgccgtcgccgccgcccgccaccgccgcccgcatggatctctcgccgccgccgccgccgcggcaaggcggcgtcgtcgtcgtccgctcctccaggtgcgcgcggcaaggacggagtccacgggcgtctccgtcgggttccgcgcgccccagttcgaggtgcttccctccgccggagttttaagtttgtctcggggaaggtttcatcggacgggatttgggcgtgggcgttgattgatttcgaggttttttcttggcgtgcagctcccggagccactgacggggaagctctggacattggatgacttcgaaggcaaccccgcgctgctggtcagtgattggttctaggttgcttcgtgcttgaattcaattctgcatttatttattttttaggaaagaaaaaaaccaggttcagttaatttcactctaaactggagaactgaatagaaatgagtttatccatgctatatgcttaactacatttcgtcgattttgccactcccatttccccatgaaactcaatgaaatattgaaatgctaatatgctttctcattttcccattagctatacgcttacacttacaactgtttggattgtcccacacctggtcaatagtagtggctttgtgcttggattagttatgagccgtctatctagtcatttatgtggaaaaactgttaggtcttgtaggtattacagcctctttatgaatgaaacagatcaaaaattcaagatgtggcttatgactttgatggaagaacattaccagtttattatctccattttgtcaaattagtccttgagttccctctgaatttctttgccaaattgcaagtcttaataagtgctgaatgatatttatgtcagcatgtatctttatctcttcaagaagtagctatcagctcttgacatattgattttgttttgttgggaaactcgtagtctgtatttaagaagagaaaggaggggatgtaggcaattgagcaatcgatcagccactgcatagattatctacatcttatatgattattttcctcctttcaggttatgtttgtatgtaatcactgtccattcgtaaagcatctcaaaaaagatattgcgaagctcacctcattctacatggaggtatggactctagaatgggtagtgagcttttccctttaacttgtgtgtttgtattgacatctcgatacaatgcagaaagggcttgctgctgttgccatatcctcgaactcaattgtgacacacccacaggttgagttacaaccaatgaactgtataccttttattttggtcttctgcatgcttatgaatcttaagtaaccagaagttctcttgttgagagcttaatggattttgttataaaatattttatttgaatgtagtagcagttgtggaagtcctgaaattatattgaaacgaaataaaatacaaaaaaattataaagatacagatgatcatgaaatttaaaccacatactctatagtaatatagaagctactaaaaattgtttaaaacttttaaatagcagatttaattcaaattgttaccctatctaatttttttaggaaatcaaccgtcgtctgagtaactattgcttttagccacacgcccaaccaagtctggcaaagaaaacatttcccatctctgcctgtttggtggaattttcgttttaagttgtaccttaacacagatatgtatgctggagaagcatcgaattttaggatttgtcctgcagggtataaaatacaatggctatagataattagatagccatttagctgctggttatattatatgtaagctgacaagcttataggctatccgataagatgtcatgagtttctcttggtgtatgagaaaaatacttcttgagttactgtagtataggattaggcaacaattccttcctatcagtgatccatggatatggaaactagttgttttatgttcttctgttccatgtgatctatgtgatacttgtcagatttttccattttaacacaagttcatctgattttgtaggatggtcctgattacatagctgaggaagcaaaattgtataaatactctttcccgtatctatatgatgaggtttgaccacattattcccttcaattgtatggctatttgtccagacacagcggccatgctttctctatttaactcatttgtcctactgcaacctgcagtctcaagaagttgctaaagcttttcgagccgtctgcacgccagagttttacttgttcaaaaaggtaacatcatctatgcttatgcctagaatcatgaattcatgatgctgctatgtccaatgtctaggatgctaacacgttgttcctgaaagaaatttaatgcaacgccatgcaaaatacttgaactgctgcaataacttgcaagttgcatgctaaccacggctagacaatccatgttagctaattagagtgtctcagcactgactgggacaccaactgagcaagggtacaacgaggtatcatttgattgttgttctgtttttatgatacaaattgtttactgcatttgtagctcctgacagtgagcagatcaccattgaaatacatcatgcagcaactcagggacttcaatgggaaaataaaatcaggaagcatttttctggaaaagaaatctagcagcctagcctaccccctgcagccttgtgacttgggtttcctattcaggactgaaacactctaattagctaatgtggactattgtgctggtccatatgctgcccaagttatgtcggttctcatcttgcaagttgtactgaattacactaacctcacaaatttgcacactacgagcgtaatctactattattctatctaatcattttggtttcccggtgccaggatggacgaaggccatttgagcttttctaccatgggcagtttgacgattcaagaccgagtaacaacgtgccagttaccggaaggtatgttttctaacatcttgaacaaaatttccagttcaccctcccctgtgcttatttggtatcttatttgtagggatttaagtcgtgcgattgattgtgcacttagtggacaagagctaccttttgtgccaaaacccaggtttcctttagttcctagagaatctgtgttgctttaatcaccatgtatgtcacttcactttatcatttacttgcatttgcttcttgttcctatagtgtcgggtgcagcatcaaatggcacccatgaagagcgtattgcattgtcatgtgctggaatatagatgtttttcccccttaaattgaaggttgaacatggggattgaggtgagccatgctctctactactagaagtatggaagcacacacatagtagatttatgatagctaatttcacatagtagatttatgatagctaatttataatgtaatttttaagggaaatagatgcagttgaggccttgtggagctgattcttaacgttgtgggggctgttcaacttgagagttgcaaaactagacatgaatggcgtggatagtgttatgttgtgtgctggtgtctcatcttggccggaaaaagaaaaactgatggatgtaactggtatttgtgcaacaatgggataatgcacacaagtacaataacccattattatggctaacacaacacccacgggtgaaaattaaagatgagggc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0260300, RefSeq:Os07g0260300