Os07g0268000

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Revision as of 08:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0268000| Description = Cyclin-like F-box domain containing protein| Version = NM_001065875.2 GI:297607000 GeneID:4342891| Length = 5369 bp|...")
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Gene Name

Os07g0268000

Description

Cyclin-like F-box domain containing protein

Version

NM_001065875.2 GI:297607000 GeneID:4342891

Length

5369 bp

Definition

Oryza sativa Japonica Group Os07g0268000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:9649003..9654371

Sequence Coding Region

9649003..9650226,9653270..9653743,9653853..9654371

Expression

GEO Profiles:Os07g0268000

Genome Context

<gbrowseImage1> name=NC_008400:9649003..9654371 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:9649003..9654371 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgatgatgagctgcaagaggaggaaggtttcaccagccagtggtgcaccggtagtgctgccagaagagatgatgattgaggtgctccaatggctacccgtcgaatccgtcctatgttttcgagccgtttgcaggtcctgggccacggctctctcttccgaccaattccgcggcttccacacggccaagaacaagatcaagccgttgccacccaagctgttcttcgtctcgcagaccgcgggattcggctccacatcggtgcacgcatcctcgccgctgtcgcggtcagtcctcggcggtgacgatcatcgtgatctgctcttcaatctggacaatgtgcgcggcgatttcatggccatgacgcctacaccgtgccatggcctcacccttctgcacgatgctatgggactagagtactacgttctcaatgtggcaaccaggtcgatcagccgtctgccaccttgccaaaccgtgccatctggatctgctggactgggattcgatgcccggacaggggagtacaaggtggttaggctgtttcgagagataatttctggagaaccgcataccaagtgtcagatatacactctagggggcaagcatggtgactcatggaggccagctagtggaggtgtacctttcaaattccgcactgctggaacttattctattttagcttcacaacaacataaacttcttccagtgtttgtggatgggtttcttcactggcttactggctctttgttctctttcttgaggccacatgctgccatcttatccttctctgtgacagaagagacattcagattggtcaggtcaccgccctttcaggtttcaggagtgcacttggtggatctctctggtaacctgtgcatggtccgggaccttcgtcgcatgtcgtctacgctggagatttggaagctgaatgatctttactccagtgattggtcattggagcatcgcatcgatttgtcgacggagcatgttgcccgagatttaatgaaaccagattttatcagagttattggttctgctgacagtagtggtatgtcagggaagaagaatgtaatcattgctacatccaatcgcaaggcgatcgcctatgatcctacatctgaaacactagaaacaatccttgagatcaagggaactcctttgccttaccaaacttcacgttctgctcttggactgatcagtttgtttgaagacagtcttgctcctgtgataaaggaggccctactacggcttccgggtgattatgccgtgcagttcaaacttgtctctaagcagtggcatagatttattgaaagttggagcttcgctcgtggatacgacatgtataacaacaaggacaggaggccaaagatcaggcttgtgggcatgggcacaggtggatcatcaggttttagttttgccagcatagaaaaattgcttcaagaatctcctagtaaagatacatggtttgatgcaaagctggtttgctccaagccttgccatgggatgaatctcataagcactgagctggaggattatctatacaacccttgtacaggttaccgctatgtccgcagtacccgagaggctcttgtctacattccaaatagaatacctagtgatagatttcgtcacgatcatgcttttactaccggtaataagaatgtcggcctggggttcgatccactgatgcaggagcatccgcctctgcctgtgaatgacatgcctccggcttacttggctggatttctgtactggatgagtgagccaaggttgagccagagtaagacaagcgccattctctcgttcgagatcgcgaccaagacatttgttgtcatccagtgcccttcgtgtgctctaacaagacacaacagaagcccttgcaaatcatttgtggtagagcttgaaggaatgctttgcgttgttctcgctaatccgtttgaagaggaattggatatttggaagatggagcatggtcaatgggatagagcatacagagtgtgtctgaaaggttggcctggttattcccttggagctaatgtcgtggttccgatggctgttgatccgaaggatggaaggattctgctcaacacagggagtaaattgggtctctatgatccaacgaagcgggttatcgaaaacctgtatgatcttgatgaggtgctgcgtgtcaaacagacagatgagtcgctgcatgtcgaagataaagaaaaatcttag</cdnaseq>

Protein Sequence

<aaseq>MVMMSCKRRKVSPASGAPVVLPEEMMIEVLQWLPVESVLCFRAV CRSWATALSSDQFRGFHTAKNKIKPLPPKLFFVSQTAGFGSTSVHASSPLSRSVLGGD DHRDLLFNLDNVRGDFMAMTPTPCHGLTLLHDAMGLEYYVLNVATRSISRLPPCQTVP SGSAGLGFDARTGEYKVVRLFREIISGEPHTKCQIYTLGGKHGDSWRPASGGVPFKFR TAGTYSILASQQHKLLPVFVDGFLHWLTGSLFSFLRPHAAILSFSVTEETFRLVRSPP FQVSGVHLVDLSGNLCMVRDLRRMSSTLEIWKLNDLYSSDWSLEHRIDLSTEHVARDL MKPDFIRVIGSADSSGMSGKKNVIIATSNRKAIAYDPTSETLETILEIKGTPLPYQTS RSALGLISLFEDSLAPVIKEALLRLPGDYAVQFKLVSKQWHRFIESWSFARGYDMYNN KDRRPKIRLVGMGTGGSSGFSFASIEKLLQESPSKDTWFDAKLVCSKPCHGMNLISTE LEDYLYNPCTGYRYVRSTREALVYIPNRIPSDRFRHDHAFTTGNKNVGLGFDPLMQEH PPLPVNDMPPAYLAGFLYWMSEPRLSQSKTSAILSFEIATKTFVVIQCPSCALTRHNR SPCKSFVVELEGMLCVVLANPFEEELDIWKMEHGQWDRAYRVCLKGWPGYSLGANVVV PMAVDPKDGRILLNTGSKLGLYDPTKRVIENLYDLDEVLRVKQTDESLHVEDKEKS</aaseq>

Gene Sequence

<dnaseqindica>1..1224#4268..4741#4851..5369#atggtgatgatgagctgcaagaggaggaaggtttcaccagccagtggtgcaccggtagtgctgccagaagagatgatgattgaggtgctccaatggctacccgtcgaatccgtcctatgttttcgagccgtttgcaggtcctgggccacggctctctcttccgaccaattccgcggcttccacacggccaagaacaagatcaagccgttgccacccaagctgttcttcgtctcgcagaccgcgggattcggctccacatcggtgcacgcatcctcgccgctgtcgcggtcagtcctcggcggtgacgatcatcgtgatctgctcttcaatctggacaatgtgcgcggcgatttcatggccatgacgcctacaccgtgccatggcctcacccttctgcacgatgctatgggactagagtactacgttctcaatgtggcaaccaggtcgatcagccgtctgccaccttgccaaaccgtgccatctggatctgctggactgggattcgatgcccggacaggggagtacaaggtggttaggctgtttcgagagataatttctggagaaccgcataccaagtgtcagatatacactctagggggcaagcatggtgactcatggaggccagctagtggaggtgtacctttcaaattccgcactgctggaacttattctattttagcttcacaacaacataaacttcttccagtgtttgtggatgggtttcttcactggcttactggctctttgttctctttcttgaggccacatgctgccatcttatccttctctgtgacagaagagacattcagattggtcaggtcaccgccctttcaggtttcaggagtgcacttggtggatctctctggtaacctgtgcatggtccgggaccttcgtcgcatgtcgtctacgctggagatttggaagctgaatgatctttactccagtgattggtcattggagcatcgcatcgatttgtcgacggagcatgttgcccgagatttaatgaaaccagattttatcagagttattggttctgctgacagtagtggtatgtcagggaagaagaatgtaatcattgctacatccaatcgcaaggcgatcgcctatgatcctacatctgaaacactagaaacaatccttgagatcaagggaactcctttgccttaccaaacttcacgttctgctcttggactgatcagtttgtttgaagacagtcttgctcctgtgtgtatgtcacgcccggaatttctatccaaaattccaaacgcttacatgtgtgtgaaccctcgtccaggaatcagccgaggcacacaataacaaattgataatagagtacaattattactctaattaataagcgaataaaatgtaattacagaggtagatagttcctctcaatcaataatgatctaagtagcggaaaaaataagataaacggcgcagacagctccactccacaggcagcttgaccaaggctacacctaatcctccacaccatcagcatcattgtagaactcttcctctgatgaatgattgtaaggtgagtatatgacatactcagcaagccacgcagcaaatatgcaaatgcacaggataacaaaggatggcatagtagggttccatttgcataaatagcatttaataaacattttagaatttaataaagcaattgataattaagcaatattaattcaatgctatacaacataccctgttgtataggcccaaccattctgaacaaccatcccggctgcacagtcctatctccaaaccaggaatataccattccaaaccaggagctaaacaaattattaccatttatagcatttgttatcatgatgagaggtgtgagactaatcacgaaaaacattgttagacccgcccataaccgcgggcacggctattcgaatagttttactctgatcagaggtgtaccactgtacccacaagacacaaccccacatcatgtcaccatgtgcctcaataccaccacggtacctcggaaaggagttgtgacaataccccttgcacaacacaatccactacagcgcacatttcctggatcataatcacccccttataaacaaggcatggactccccagcgacccccgtgggcttatctccgccacttctcagtctggtgctccgcaatgaaccatgctatacaaaagataaagtcgttgcccacgctgacttgtggctggcacggttaatgtttcacaaccgaaactcgtgaaccggtccttaattgttatgagcacgattctcaaaaccatgtgctcacaacccaccattatcaagttttagttggcaagtaattaattaaccaatcacgattgaccatcgtgaactatcattaagccatcattaaatagtgagtcataagttatcccaaaagtgtgctaacgtttctaagcagggctaagcaattatatctaatatctagttgaaccaatatacatagcccaactagtcaagttataataaccgaaggtatcaaggaataaagtaatcaagaacaaaagggctataacaatgaataggttaattccacccaatgacattcgaaaataaatgcaatagttgaatagaaacaatcgctttaaataggatcaacatgctcaaagggttgtttgggatctgtgtgacttgccttgctggccttggaactcttcatattcttctcctgcgaaaacggactctccagaaacgtcggaatctaaacaggaaagagcaaaatcaccaaaacagtacataaacaagcatgaacagtatatgtggatatttttaacatgtagatctcaattttagaaaaatttagagacttgaaccaactaaatccgagctaagatgaattagttatgaatttttgaagatttaatcggattaaaacacttatattgattttaattgaattatgacgcaataatgaattatttttgaaaaggaaaaagggatttattgcgtcagcggctagggtttgcggtggaccgggtgcacggcggcggttcacgggaacggacggccgagatcaaccctatccaaaacggacggccgagatcgatcggtccacgaccggctcacggggaacggcaacgatgacgtcagcgatgacgtcagcaccggcggcggctcggcggctcagcatcgcatgctcgccggcgaacgacagcgcggcgacgcgaacggagggcaccaggacgtagagcgcgacgcggcgaactcaccgatgaccaaaacgacggcggaagagcaacggacggcgccggcgacgaggaaaaagcggcggcggagatcgggtcgacggcggcgacggtgctccggcggtcttcggcgacggcgaaggggcggacgaggacggcgacgacttggcgatcccgacggtggccttcccgagtgatgacgacgaccgaaacgacggcggcgcacggctgaagcggcggcgacgacggcggcacaaggtctcacggcgctagggcgctacagacgacggcgagcaaaggcgagggtggcgacggatagcggcgactccgggggtccttttaaaggggctaagaggcggcggcggaggcccacggcgaccggcgacgagaaggaaagttcgggctcggagagagagagaccgatccgaatcgacctcgaatccacgaacttccaaagcgagttagacgatgattccaaaagagaaaaggtagaggagatcccgagaatcatttcccctctattgattcggccggagatggaaagacgcggccgaatttggaaggagacgacggcggcgcacgctagggtttcgagcggcggccgacgcgaggaagacgacgacctgacaggcgggccccacctgtcagcgagcgagggcgcgcgcgcgcgggcggctgcggactggactgggccgacttgggccgagagagagagaaaaggttttgggccgactttcggcccaaagccaaaagagacttttaaaaacatttttcaatttaaattatttatgaaatgcaattccatttattaaaaatacttccttagctcaaataaatcccagaaaaatctaggaattatagaattaagcaaagtatttaatgaaattttatctggtcccattttatattggaatttattaattaaaatagatcttctcttctaggcttttaaaaataaattctaaaaattccaattaaacaacaatttatatatttttggatttttaggatgtgacagtgtaaaaccaatgaagagatagcattgtcatctccccttgccaaggtgataaaggaggccctactacggcttccgggtgattatgccgtgcagttcaaacttgtctctaagcagtggcatagatttattgaaagttggagcttcgctcgtggatacgacatgtataacaacaaggacaggaggccaaagatcaggcttgtgggcatgggcacaggtggatcatcaggttttagttttgccagcatagaaaaattgcttcaagaatctcctagtaaagatacatggtttgatgcaaagctggtttgctccaagccttgccatgggatgaatctcataagcactgagctggaggattatctatacaacccttgtacaggttaccgctatgtccgcagtacccgagaggctcttgtctacattccaaatagaatacctagtgatagatttcgtcacgatcatgcttttactaccggtaataagaatgtcggcctggggttcgatccactgatgcaggagcatgtcattgtggagcttttctatcagtggagaaacttcaaaacctgtcgttacaacataacatgctcgctttttacctgtaaatcgcgtcacacgtgtgatttttttacagccgcctctgcctgtgaatgacatgcctccggcttacttggctggatttctgtactggatgagtgagccaaggttgagccagagtaagacaagcgccattctctcgttcgagatcgcgaccaagacatttgttgtcatccagtgcccttcgtgtgctctaacaagacacaacagaagcccttgcaaatcatttgtggtagagcttgaaggaatgctttgcgttgttctcgctaatccgtttgaagaggaattggatatttggaagatggagcatggtcaatgggatagagcatacagagtgtgtctgaaaggttggcctggttattcccttggagctaatgtcgtggttccgatggctgttgatccgaaggatggaaggattctgctcaacacagggagtaaattgggtctctatgatccaacgaagcgggttatcgaaaacctgtatgatcttgatgaggtgctgcgtgtcaaacagacagatgagtcgctgcatgtcgaagataaagaaaaatcttag</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0268000, RefSeq:Os07g0268000