Os07g0271500

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Revision as of 08:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0271500| Description = Similar to Chalcone synthase| Version = NM_001065880.1 GI:115471492 GeneID:4342896| Length = 2008 bp| Definition = ...")
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Gene Name

Os07g0271500

Description

Similar to Chalcone synthase

Version

NM_001065880.1 GI:115471492 GeneID:4342896

Length

2008 bp

Definition

Oryza sativa Japonica Group Os07g0271500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:10050883..10052890

Sequence Coding Region

10050970..10051177,10051591..10052591

Expression

GEO Profiles:Os07g0271500

Genome Context

<gbrowseImage1> name=NC_008400:10050883..10052890 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:10050883..10052890 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaccgacgacgaccatgggaagcgccttatacccgctcggcgaaatgcggcggtcgcagcgcgccgacgggctcgccgccgtgctcgccatcggcaccgccaaccctcccaactgcgttacccaggaggagttccccgacttctacttccgcgtcaccaacagcgaccacctcactgccctcaaggacaagttcaagcgtatctgtcaggaaatgggcgtgcagaggcggtacctgcaccacacggaggagatgctgtccgcacacccggagttcgtggaccgcgacgcgccgtcgctcgacgcgcggctggacatcgccgcggacgccgtgccggagctggcggcggaggccgccaagaaggcgatcgccgagtggggccgcccggccgccgacatcacccacctcgtcgtcaccaccaactccggcgcccacgtcccgggtgtcgacttccgcctcgtcccgctcctcggcctccgcccctccgtgcgccgcaccatgctccacctcaacggctgcttcgccggctgcgccgcgctccgcctcgccaaggacctcgccgagaacagccgcggcgcgcgcgtcctcgtcgtcgccgccgagctcaccctcatgtacttcaccgggcccgacgagggctgcttcaggacgctcctcgtccagggcctgttcggcgacggcgcggccgccgtcattgtcggcgccgacgccgacgacgtcgagcgcccgctgttcgagatagtgtcggcggcgcagacgatcatcccggagtcggaccacgccctgaacatgcggttcacggagcgccgcttggacggcgtcctcgggcggcaggtcccggggctcatcggggacaacgtcgagcggtgcctcctggacatgttcggcccacttctcggcggcgacggcggcggcgggtggaacgacctgttctgggcggtgcacccgggctcgtcgacgatcatggaccaggtcgacgcggcgctcggcctcgagcccggcaagctggcggcgagccgccgtgtgctcagcgactacgggaacatgtctggcgctacggtgatcttcgcgctggacgagctgcgccggcagcgcaaggaggcggcggcggcgggtgaatggccggagttgggagtgatgatggcgttcggcccggggatgaccgttgatgcgatgctgttgcacgccacctctcatgtgaattaa</cdnaseq>

Protein Sequence

<aaseq>MAPTTTMGSALYPLGEMRRSQRADGLAAVLAIGTANPPNCVTQE EFPDFYFRVTNSDHLTALKDKFKRICQEMGVQRRYLHHTEEMLSAHPEFVDRDAPSLD ARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHVPGVDFRLVPLLGL RPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELTLMYFTGPDEGCFRT LLVQGLFGDGAAAVIVGADADDVERPLFEIVSAAQTIIPESDHALNMRFTERRLDGVL GRQVPGLIGDNVERCLLDMFGPLLGGDGGGGWNDLFWAVHPGSSTIMDQVDAALGLEP GKLAASRRVLSDYGNMSGATVIFALDELRRQRKEAAAAGEWPELGVMMAFGPGMTVDA MLLHATSHVN</aaseq>

Gene Sequence

<dnaseqindica>88..295#709..1709#gcaaaacaaaagtgcgagacgtgccaagcaaggcgggcggagatcgatcgagatcgaagaattagttgcagtgatttaattgtttgcatggcaccgacgacgaccatgggaagcgccttatacccgctcggcgaaatgcggcggtcgcagcgcgccgacgggctcgccgccgtgctcgccatcggcaccgccaaccctcccaactgcgttacccaggaggagttccccgacttctacttccgcgtcaccaacagcgaccacctcactgccctcaaggacaagttcaagcgtatctgtacgtgtaaacacacgacagcctctctccttctactatccaactcttctcagtcgatatattaattttgcatatacaacctccaccgagaatggattttaaaccctcgagaaaacgttcacacgtccactcgttgtttacatatatcacccaaatggttacaaaataaatttgcaaaaaaaaagatgtattagcatgtgatgtatcagtcgataaatatacatgttaaaattcaacttttacaaattacaaattataaaaaatatatacaaattagaactcttacaaactacaaattataaaaaaaaatctacaaattaaaattcaaagtattagggcggatgtagtatatgtttttgcaagtttagtgagtagtgacaatgcgagagcatgctgtccatggtcggtcgcaggtcaggaaatgggcgtgcagaggcggtacctgcaccacacggaggagatgctgtccgcacacccggagttcgtggaccgcgacgcgccgtcgctcgacgcgcggctggacatcgccgcggacgccgtgccggagctggcggcggaggccgccaagaaggcgatcgccgagtggggccgcccggccgccgacatcacccacctcgtcgtcaccaccaactccggcgcccacgtcccgggtgtcgacttccgcctcgtcccgctcctcggcctccgcccctccgtgcgccgcaccatgctccacctcaacggctgcttcgccggctgcgccgcgctccgcctcgccaaggacctcgccgagaacagccgcggcgcgcgcgtcctcgtcgtcgccgccgagctcaccctcatgtacttcaccgggcccgacgagggctgcttcaggacgctcctcgtccagggcctgttcggcgacggcgcggccgccgtcattgtcggcgccgacgccgacgacgtcgagcgcccgctgttcgagatagtgtcggcggcgcagacgatcatcccggagtcggaccacgccctgaacatgcggttcacggagcgccgcttggacggcgtcctcgggcggcaggtcccggggctcatcggggacaacgtcgagcggtgcctcctggacatgttcggcccacttctcggcggcgacggcggcggcgggtggaacgacctgttctgggcggtgcacccgggctcgtcgacgatcatggaccaggtcgacgcggcgctcggcctcgagcccggcaagctggcggcgagccgccgtgtgctcagcgactacgggaacatgtctggcgctacggtgatcttcgcgctggacgagctgcgccggcagcgcaaggaggcggcggcggcgggtgaatggccggagttgggagtgatgatggcgttcggcccggggatgaccgttgatgcgatgctgttgcacgccacctctcatgtgaattaagttaattaattttgtttcatgtagtggttaattggatataatccggggttaccggaattatattcagtgaagccaagaattaagcgtttcttcagctcgttttctgaccgaagtcggatgtgccacgacgtgggatagcgcgtttgttgcatcgtgcgttttaatcggtcatgtttgtgtgtaatatgaaacaaaaaagaaaaagaagaaaagtttgtagtatgtaacaaactcccacttgaggagatcaataaataaaggagaaagaagatcagaaaagctgcgaattttgcagcacc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0271500, RefSeq:Os07g0271500