Os07g0275300

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Revision as of 08:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0275300| Description = Zinc finger, RING-type domain containing protein| Version = NM_001065898.1 GI:115471528 GeneID:4342914| Length = 366...")
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Gene Name

Os07g0275300

Description

Zinc finger, RING-type domain containing protein

Version

NM_001065898.1 GI:115471528 GeneID:4342914

Length

3667 bp

Definition

Oryza sativa Japonica Group Os07g0275300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:10306386..10310052

Sequence Coding Region

10306546..10306634,10308575..10308737,10308996..10309062,10309144..10309375,10309658..10309868

Expression

GEO Profiles:Os07g0275300

Genome Context

<gbrowseImage1> name=NC_008400:10306386..10310052 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:10306386..10310052 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccggagaggtccgagctggggcggcagctcccgctgagagggcccctcaaggcactggaggccgacatccaccatgccaacaccatggctaatgctatccagaggaactatggtggagcatgtgtgcagatgaggttgtcgtgcagctcactggcgccattctttctttacctcatccagtggctggattgtggctgctgttatgctcttcccagttatctaggcctttttcacattctcatttgcaaggtttatgcagatggagatagctcagtatcaacgtatgaaaggcgtgcaagccttagagaattctatgcgatcatctaccctatccttcaacagcttgagggtagtttgattgagagggacctgaaagggaaagggcgatgtaaagacatagtgagtaggaagcggctcgaagattggaggaagctttgtaacaaggatgtggaaagggaggatgaatgtgggatttgcatggagacatgcaccaagatggttctgcctaattgcagtcatgcaatgtgcataaaatgctacagggactggtatagaagatcagagtcttgccctttctgccgaggaagccttaaacgaattcgctcaagagacctgtgggtgctcacaaattacaatgatgtggttgatcctgtaactctagaaagagaaaatgtgaggcatttctacagttatattgatagtttgcctcttatacttccagataatattttcttcttctactatgattacctactctaa</cdnaseq>

Protein Sequence

<aaseq>MPERSELGRQLPLRGPLKALEADIHHANTMANAIQRNYGGACVQ MRLSCSSLAPFFLYLIQWLDCGCCYALPSYLGLFHILICKVYADGDSSVSTYERRASL REFYAIIYPILQQLEGSLIERDLKGKGRCKDIVSRKRLEDWRKLCNKDVEREDECGIC METCTKMVLPNCSHAMCIKCYRDWYRRSESCPFCRGSLKRIRSRDLWVLTNYNDVVDP VTLERENVRHFYSYIDSLPLILPDNIFFFYYDYLL</aaseq>

Gene Sequence

<dnaseqindica>161..249#2190..2352#2611..2677#2759..2990#3273..3483#acttcccccattccattccattccattcctttcctttctctctcctccccctcgcgccattaaggctccagagctttctccctcttcacttgggggggactggaagaagaggaggagctcggctcgaggccccaagaatcgagttcgtcggaggcggcggatgccggagaggtccgagctggggcggcagctcccgctgagagggcccctcaaggcactggaggccgacatccaccatgccaacaccatgtgagcgctctctctcccccgtgtgttgtttccgcacgatttctgctgggtttgggtgggggattaggatgagcgggcgctcgtggtgaattcggaggaaacgaaactgttgtgatggagaagtcccccccgatttcggaaaccgcagtaattcaagaacgcaagattggagagtacggcgtttcaggggggggggggggggcgcggcggtttcgcgcgattcctgcgggaatcttcgttgggcgggagggtaattcgggaagttcacccaggtaagtcgtgggactgcgccgtccgaaattcgtgttgagggttactgttgattttgaactggcccttgctaggttctttgcctctacaagcatataccctattaccctgtggttgaagtgagctctcagtgtggtgctgtgttgtgagagtaatggattagagcaattgtagtgtgttcacgaatcagtttagttgtgaagaaccctattatagcaaattgattttttgcttcctggccaaaaaaagtggaaatttcttctgtgtcctaggatgataagtcaacctggagtccagaaattactcatcaataacttcaattgtcaatcatttactatgataagggccgcctcttgctactgtttagtggtagtaacaagttttgaggtggggactgagtgtaataggtcaaaaacaaactatacatctacaacttactatcacgaatttttctttgcgaatgtgttcatttatccatttcgtgacatttttgtgttggattaatgataagagttaattggatccgtgccattacaaaattgtccatttgagaaaataccactactattcgtgaaacctgctacatgccattgcaattttctaaaatccgaaccatgccattgccatcgggttttctattaatatcatcttccatcgtgtctactgtcaatgtcatgcccgtcttcaatctccagccatcgtcgggagttgataccggcgggttatcgtcagggcgtgacaggaacttccaccatctcctcgttgacttgctcttgcgctcgcacacgcacacatcgctcttgctctgttgccgcgacttgcgagcgtagagtgccgccactcggcaggcgcattgtgtggctggatggatctggttggtgtgtcgatctgcttgtcgggtggatggtttgccggtttcgatctgattgaggcgctacgtgtggattggatggtcgttgctgccgctgcattactgcattagtagtagcgccatggctctcgcgcgccgacactgttgctgctgttcgattggtatcagtccgggaggtgaggcggattcctcactgctcatgctgttcatgtggtgatgtgcatgtgtggttcaatgggttcgggttgttgggatgagcgaggagcagggattgattcattgtgctgcgctgttgctactgctgctgctggaacacgttggagatgcagccgggaggtagaatggctggcaggaactcgatgtctggccatggagatgacgagttaaggcgtgatagttggtgatgattcggggtcctattgaagggggatttgtgtgggaatggcagaggaagtgagggagtaattcccctccgtcaattcggaacgagaatggccgagagagttgaattggaggaggtgccacactagggttttaatggggagagaggacgcagtggctggaggttgaagaagggcctgacgagtggacctgaccttgacggtagcggtgatggtagcagaaaacccagcggcaatgacatggtttgaattttagaaaattgcaatggcatgtaacaggtttcatgaatagtaatggtacttttccaaatcggtagttatgtaatggcatggatccaattaatcctaatgataatgggttggtcgttgttgatttatgacttgtttccaaatttcagggctaatgctatccagaggaactatggtggagcatgtgtgcagatgaggttgtcgtgcagctcactggcgccattctttctttacctcatccagtggctggattgtggctgctgttatgctcttcccagttatctaggcctttttcacattctcatttgcaaggtaccactgaagtatggatgtatgtatctttgtacaagaaagtatggttgcttgcatttatgggcttgttcagctgtcatttttgtggctgcagctgtcattagtagccatggctgtgcgctcagccacacacactagacacagaggatgctgcagccataaaaatcgcagccaaatagcccctctatgttttatgacttgcagttgtataagaggtttggtttcatatatcatatgtctaattgtttgtatgtacaggtttatgcagatggagatagctcagtatcaacgtatgaaaggcgtgcaagccttagagaattctatggtaatctgtaacattcatgtaatatgtaattcgtaaaagtctaatttggaatcatagccttaaacaatctctgccttccagcgatcatctaccctatccttcaacagcttgagggtagtttgattgagagggacctgaaagggaaagggcgatgtaaagacatagtgagtaggaagcggctcgaagattggaggaagctttgtaacaaggatgtggaaagggaggatgaatgtgggatttgcatggagacatgcaccaagatggttctgcctaattgcagtcatgcaatgtgcataaaatgctacagggactggtaaatagtattttcacaacttaattgcacttattgacagtagcaacctgcttgcaatttggatacatattctgagcctttcttttctgaactatgcagtcaaaggatgtatgtatgtatgtatgtatgtatgtatgtatgtatgtatgtatgtatgtatgtatgtatgtatgtatgtatgtatgtatatgtatgtattgtatacatagacatatctctggcttctgttgatatctttgttgtcatacaggttgacttaattttggtttgttcttcttgtaggtatagaagatcagagtcttgccctttctgccgaggaagccttaaacgaattcgctcaagagacctgtgggtgctcacaaattacaatgatgtggttgatcctgtaactctagaaagagaaaatgtgaggcatttctacagttatattgatagtttgcctcttatacttccagataatattttcttcttctactatgattacctactctaatctggaaacaccacaagttgtgtgtgtgaaattatgaaagcggagaaagccatttgtagatttttctttgttagagcttagaaggatggtctttccacctctgacaaaacaccttttactttagtgtagctgcataacacttctaaagcaactgtaaataaaatctgcaggtgaagttcattgt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0275300, RefSeq:Os07g0275300