Os07g0280200

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Revision as of 08:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0280200| Description = AMP-dependent synthetase and ligase domain containing protein| Version = NM_001065908.1 GI:115471548 GeneID:4342925| ...")
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Gene Name

Os07g0280200

Description

AMP-dependent synthetase and ligase domain containing protein

Version

NM_001065908.1 GI:115471548 GeneID:4342925

Length

6499 bp

Definition

Oryza sativa Japonica Group Os07g0280200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:10668602..10675100

Sequence Coding Region

10668619..10669665,10673639..10673825,10674290..10674435,10674527..10674594,10674826..10675054

Expression

GEO Profiles:Os07g0280200

Genome Context

<gbrowseImage1> name=NC_008400:10668602..10675100 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:10668602..10675100 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagctcccacctccatggcgaacgcggatggcgagagcacgcgcaccggctactgcgccgcgaccaagtcgttccgcagcctccggccgccggtgccgctgcctccgccggacgtcccgctctccttcccggagttcgcgttctcgctgctgccgcggtcgtcgtcgtcgtcgtcgtcgtctcttctcccggcgaacccggcgctcgtcgacgcggccactggcgaggccgtctcgttccaggcgttcctgtcgcgggtgcgcgcgctcgccggagccctccgctcgcgcgtcgggctgcgcggcggcgacgtcgcgttcgtgctcgcgcccgcagggctcgacgtgcccgtgctgtacttcgcgctcctctccatcggcgccgtcgtgtcccccgccaacccggccctcacccccgccgaggtttcccgcctcgtctccctctccggcgcatccgtcgccttcgccgtctcgtccacagccaccaagctccccgctggcctcaccaccgtcgtcctcctcgactcgccacacttccgctccctcttgatggattgcggccaagcccaaggacaggagccgctgccggtggtggtggtgcggcagtcggagacggcggcgatccagtactcctcggggacgacggggcgggtgaaggcggcggcgctgcctcaccggagcttcatcgccatggtggcagggttccacgcgctgcgggccaaggctcgggaggtcaggacgctgctcggtgccccgatgttccactccatggggttcttgttcgtgctgcagggcgtcgcgctgggggcgacgacggtggtggtgacggacgcggtggcgcgggccgggatacgggggctcgtggaggcggcggagcgttgggcggtcatggacatgacggcctcgccgccggtggtgctggggatgaccaagcagaggtgccggctgccggcgctggagcggataacctgcggcggcgccccgctgccggcgccggcgatcgaacggttccgccggcgattcccccacgtcgatttgtgcatgggttatggatcaaccgaggcaggtggcatatcaaggatgatcagccaggaagagtgcaaccacataggctctgctggccgtgtcactgagaatgtcgaggtaaagattgttgaccatgtaacaggcaagccattgcctgccgggcagcaaggggagctttgggtgagagggcctgccgtcatgacaggttacgtgggtgacaacgaggccaatgcaaccacctttaattctgaaggatggctgaaaactggtgacctttgctatattgatcaggacgggtttctttttgtagttgacaggctaaaggaactgattaaatacaaggcctaccaggtaccacctgcagagctggagcttgtcctgcattctttgccacaaattgttgatgctgcagttatgccgtatcctcacgaagaagcagggcagataccagtagcacttgtcgtaaagcaaccaggaagcaagcttactgaagcagaagtcatgtacaatgtcgccaagcaggtagctccatacaagaagatccggaaagtgctgtttgttgactccatacccaaatcgccatctgggaagatcttgagaagggaattggtaaatcatctgcggttgtgtgaattgtcgagattgtga</cdnaseq>

Protein Sequence

<aaseq>MAAPTSMANADGESTRTGYCAATKSFRSLRPPVPLPPPDVPLSF PEFAFSLLPRSSSSSSSSLLPANPALVDAATGEAVSFQAFLSRVRALAGALRSRVGLR GGDVAFVLAPAGLDVPVLYFALLSIGAVVSPANPALTPAEVSRLVSLSGASVAFAVSS TATKLPAGLTTVVLLDSPHFRSLLMDCGQAQGQEPLPVVVVRQSETAAIQYSSGTTGR VKAAALPHRSFIAMVAGFHALRAKAREVRTLLGAPMFHSMGFLFVLQGVALGATTVVV TDAVARAGIRGLVEAAERWAVMDMTASPPVVLGMTKQRCRLPALERITCGGAPLPAPA IERFRRRFPHVDLCMGYGSTEAGGISRMISQEECNHIGSAGRVTENVEVKIVDHVTGK PLPAGQQGELWVRGPAVMTGYVGDNEANATTFNSEGWLKTGDLCYIDQDGFLFVVDRL KELIKYKAYQVPPAELELVLHSLPQIVDAAVMPYPHEEAGQIPVALVVKQPGSKLTEA EVMYNVAKQVAPYKKIRKVLFVDSIPKSPSGKILRRELVNHLRLCELSRL</aaseq>

Gene Sequence

<dnaseqindica>18..1064#5038..5224#5689..5834#5926..5993#6225..6453#gaagagaaaaaataataatggcagctcccacctccatggcgaacgcggatggcgagagcacgcgcaccggctactgcgccgcgaccaagtcgttccgcagcctccggccgccggtgccgctgcctccgccggacgtcccgctctccttcccggagttcgcgttctcgctgctgccgcggtcgtcgtcgtcgtcgtcgtcgtctcttctcccggcgaacccggcgctcgtcgacgcggccactggcgaggccgtctcgttccaggcgttcctgtcgcgggtgcgcgcgctcgccggagccctccgctcgcgcgtcgggctgcgcggcggcgacgtcgcgttcgtgctcgcgcccgcagggctcgacgtgcccgtgctgtacttcgcgctcctctccatcggcgccgtcgtgtcccccgccaacccggccctcacccccgccgaggtttcccgcctcgtctccctctccggcgcatccgtcgccttcgccgtctcgtccacagccaccaagctccccgctggcctcaccaccgtcgtcctcctcgactcgccacacttccgctccctcttgatggattgcggccaagcccaaggacaggagccgctgccggtggtggtggtgcggcagtcggagacggcggcgatccagtactcctcggggacgacggggcgggtgaaggcggcggcgctgcctcaccggagcttcatcgccatggtggcagggttccacgcgctgcgggccaaggctcgggaggtcaggacgctgctcggtgccccgatgttccactccatggggttcttgttcgtgctgcagggcgtcgcgctgggggcgacgacggtggtggtgacggacgcggtggcgcgggccgggatacgggggctcgtggaggcggcggagcgttgggcggtcatggacatgacggcctcgccgccggtggtgctggggatgaccaagcagaggtgccggctgccggcgctggagcggataacctgcggcggcgccccgctgccggcgccggcgatcgaacggttccgccggcgattcccccacgtcgatttgtgcatggtgagtcaccgtcacgtacagtctgaaaacttcttttctggtaagctgcctgtttctaccttcttttcttgctgctgaaactacgctaccaccgaaacaccaaacactaatgcaaacatgtaggagtagtaatattacggcaaaagttgatgtatttcagttaaattaaatttttactgttaattggataaaaaaatactcgaaatttatactaccttcatattttaatgtatactttttttttaacatttgaccattcgtctttatcaaaaaatttatgtaattatcatttattttactgtgacttgattcatcatcaaatatcctttaaacatgacataaatatttttatatttgcacaaacattttgaataaaatgaatggttaaacgtcagttgaaaagtcaacggcgtcataaattaaaatacgaaaggagtatgtcaccatgctgacacgttttcagcccttctccccgctcccctgttttttatctactggtccaaccagcacgttgatgtaaataattaggcgcgacaagttgtttgtacgcttgtagagcatcagcgcgttacatattctgtatataataccaggtgaaacgccgcacgttgctgtgaaaatttactataataatcatgagtaaaaataatatgtaagataatttaaacaacatgagcttacataaaactaagtttacataagttgatgtgattaaatctaaatagtatgtagaatgattatttaaatgtaaaagtaagatgacgtggctttatgaaagaataaaagataaaagataatttagaccatataatctaagggctaaaaaatttgacatgatatgacttaataagagaagaaaaagagagataatttgattcatagattgatcatctaaggacaaaaaaaaaatagatgtgatatgacttaacgagagaaaagaagaataacatgaactaagtgaggatgaactatgtaggatattatagaaaaagatgaagagatatattgaaatattatgtgaattatgtggggtgatttaacatgcttacattttaaatctctaaaaattaataaattattaaattatagataatatagtacgcttggatgatacttaaatgtaataattgttagtggataatgatgtgacatctttgtatgctaagtttttagagagaataagtaaacaacatggttatatcatatatgattgaggcaatttagttgatactaaatgggaacatatcttatgcacctaagtttttcgtacacactccatacacacaaaataacaaatatcgcgaaaaattcttgaaaaaaataatcggaattgagttccttattaaatatatgacgttgatcttttgataatctgaagatcggacttgagtccctcgtaaaaggatttaaattgcaatagtagtttttttattctaaacatgtgaagtgtgatctgtgtaaaataattaagagccaattaaagatcgatgaggtgttagaaaatcttccctctgatctcaagacggaccaataaccgatatttaaaggccagggagattacaaagcgagccgctctgaagtcgcttttcttgtttgtctgaagtcgcttttattttttgtcaattcacgatgtctttgtactttgtagttcgtactcacctattaaatctgtacgacatgtagctttaacaaaagacaaaaactacaaatgagtagtatgaccctaagtctatatttgatactagtttgaccagcatgcatctgcacgtgagatatattttaaatagaacccggattttaaaattattaaatcatggtaatattataattcagattaataactcagtatttattatttttgaatttttagttatcagattataaaaaattgatactccagaccaagcacaactcaatgtttattaattgattatagaaaaaacagtatactaagctcaacataatcatggagattacatttccacaaaccgtacaacatggtatttattaacttttgaatttataaattgttaaatttcaaaatctataattcagactccgtatgtacttaagtacaacttaatattcacaattcctttggaggatccagttcacacaacaaagggggtggttgtgatgctgctacgtatatgcatctcaaccggcatgactgactaataccggggaagtatccggtgcaaccacctaattcggtgcaataatgcaactttcatcctacaccgttcgatcgagaaatggacgtccaagattcgtccacgtcaccatgagttaaaatttaactctcggtaaattttaactcacgagtgaatctgcgagttaaattttaactcagggtgacgtggatgaatctcggacgtccatttcttgatccaaccgtgtagcataagagttgtattattgcaccgaattaggtgattgcacccgatacttccccgactaataccatcccattatattattcgtaacccactataatattatgaatctagatagacacatgtctagattcgtaatactagtatgtgccatatcccatactagctaggttttttttaagggacggagggagtaacacccaccatcgtgcaccatgttcttccttacatatacccctccatcccaaaaaaaacccaatccaacctacaaacttggacatatgcgtgtccaggttcgtagctagctagggtttgtttttttttttaatgacggagtagtagagcataagcagggtgctccttttgctgctatcaagaagtgataaagagttgataggctctgtttgaatctcctaaaaatgaatatgaagatgaagattaagtttttatgtaaaacgaggtggtaataacttgtgattaattgagttttaattattacaaacctgaaaaatggattaatatgatattttagaacaactttcatatagaaaattttcgcacgaaacgcgccgtttagtaatttgaaaagcgtgccatgaaaatccaaaacttttatctcccctcaattgggttctcaaacagggccataggcctggtggtctggcaccaaagctgatgataaagtttggcccacgaaatatttgacgtacgataatatcccacctgacaatgtcaaaaaaaaataaattcgtagctacgagcttggacacatttgtgtccaggtttgtaggtaggattgatttttttgacggaggggtatacccgtaaatgattggtcccgcgtgtcaaaggacatatttgtgtccaggtttgtaggtaggattgatttttttgacggaggggtatacccgtaaatgattggtcccgcgtgtcaaaggactgcgttcctctgacgatctcaccccacttagctctcagtagtgatactagaaaaaaacatgtggcgtccagatcctcgttggtatatggggcactcaatttgtaacattttggatttggaagcgcaaggtttaattagaaaatctacggattttaatagaaagttcgagattttaaagtacaaaagttccttgttgattaaatataaagtgatttggtgtccttttttttctctagcagaatcgtcaaacaggacatcaaaagtgggaagttgataggatttctattcctcactgtcgtataggagcgagaaaatggatgcgcggaaactttgctagaagaggaaattcaataattcctcctgcacggaaaacggaataattcattagcgtgtgattaattaagtattagctaattcttttttaaaaatggatcaatatgatttttttaacaatattcgtatagaaaattcttataaaaaacataccgtttagcagtttgaaaatcgtgcgttgaaaaatgagtggagttgggaactcactcaaacgaacttagccttagattcattatgaaggggctcaagattattttctgtcctccttgactaaactattttggtcgatgttaattcaatccagggttatggatcaaccgaggcaggtggcatatcaaggatgatcagccaggaagagtgcaaccacataggctctgctggccgtgtcactgagaatgtcgaggtaaagattgttgaccatgtaacaggcaagccattgcctgccgggcagcaaggggagctttgggtgagagggcctgccgtcatgacaggtgatcataatacacaacacgaacctcaggactactactattattgtgcaataggaatttaacattgagaatgatgtgtcagaggagacttatatatatgggatccggtgggcggtggctagcagtttcgaatcctcccttatacaaaaatatttgggggactgtctattccttccaaatctcgtatttttagattgatatgtcaactgccccaatctttcaatgagtatgaaaatatcaatttggtggaggtagacttttcattgatcaagctaccaactaagcgtgactagaaagccccgggtaatcgtcaggtcgtcataacccttcatgcacagcgagtaaccacggctgtttgtagctggatcttcgaagttatctgaaccaaatcaacgctatcatagacttatattgagagcttgagaatgcctcgctagagttgacttacacttttgttttcgcaggttacgtgggtgacaacgaggccaatgcaaccacctttaattctgaaggatggctgaaaactggtgacctttgctatattgatcaggacgggtttctttttgtagttgacaggctaaaggaactgattaaatacaaggcctaccaggtttactcgacatccctgaaagaagtgtcaagtagtactacatttgcagttattcgtattaatcatttacttgtaaataaatgtttctcaggtaccacctgcagagctggagcttgtcctgcattctttgccacaaattgttgatgctgcagttatgccgtgagtgcactaatcactggtcatcctacctgatcatttcgaaactaatttacacattgtccaaatcaaaccagtggttctattctgtacattctgcaatagaaaaactaatagatacaatgcattttttctttcctagtagtacattacatgcgtaattatatagaaaaatatcaatgaccgaaagatggctggtgcgaagaattgggtaaccattatgatggtgttcaggtatcctcacgaagaagcagggcagataccagtagcacttgtcgtaaagcaaccaggaagcaagcttactgaagcagaagtcatgtacaatgtcgccaagcaggtagctccatacaagaagatccggaaagtgctgtttgttgactccatacccaaatcgccatctgggaagatcttgagaagggaattggtaaatcatctgcggttgtgtgaattgtcgagattgtgactgtgcgagtgttgtaccctatagttcaattcttgtgtcaaaaagg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0280200, RefSeq:Os07g0280200