Os09g0459600

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Revision as of 07:28, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0459600| Description = Similar to Calmodulin-binding protein phosphatase| Version = NM_001069917.1 GI:115479576 GeneID:4347278| Length = 47...")
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Gene Name

Os09g0459600

Description

Similar to Calmodulin-binding protein phosphatase

Version

NM_001069917.1 GI:115479576 GeneID:4347278

Length

4780 bp

Definition

Oryza sativa Japonica Group Os09g0459600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:18020335..18025114

Sequence Coding Region

18020580..18020587,18020712..18020914,18022284..18022516,18022599..18022724,18022967..18023074
,18023620..18023683,18023754..18023907,18024256..18024427,18024867..18025067

Expression

GEO Profiles:Os09g0459600

Genome Context

<gbrowseImage1> name=NC_008402:18020335..18025114 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:18020335..18025114 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatgacggcggcggcggtgacggtgccgctgggggtgctgctgcggcgggaggtgacgagcgagcggatggagcggcccgacgtgctgtgcggggaggcggcgcgcagccgcaagggggaggacttcacgctgctcctcgccgaggccggggagcgcgtcgccggcgacccgtccacctccttctccgtcttcgcgctatttgatgggcacaacggatctggagcggccatgtacgcgaagaagaatctgttgaacaatcttctacgtgccattccttcaggtttgagcagggatgagtggcttgcagtgcttcctcgtgcgcttgtcgcagcatttgtcaagacagacaaagatttccaggcagtagcggaaacttctggtaccactgttacatttgtagtaatagatgagtgggttgtaacggtagcatcagttggtgattcacgttgcatactagaatctgctgatggttcattataccatttgtcagctgatcatcgctttgactccaaccaagatgaggttcaacgtgttactgcatgtggaagcaaggttgggaaactgaatcttgtaggtggcccagaggttggtcctctaagatgttggccaggtggtctgtgcttatctagatcaattggggatatggatgttggtgaatgcatcattcctgttcctcatgtgaaacaagtgaagctatccaatgctggaggcaggattatcattgcaagtgatggtgtatgggatgatttgacttttgaaatggcacttgagtgttctcgtggattcccatcagatatagctgccaatcgaattgtgaatgaagcaattcatcctcggggactaagagatgatactacctgcatcgtggtggacatattacctccagaaaaactagctccaagtcctcccacaaagaggcaggggaagattgtattcaataatatgtttcgccgaaaacatacagacgtatcctttatactagatcgagagtatgctgagccagatgaggtggaagaaatatttgacgatggttccgctatgctttctaaaaggcttgctgcaggttatgcactccagagcatgtttgagcccttcagctgtgcagtttgccaagtacagttgaaagctggccagggaatttctgtacacagcaatccattgcaacacgaaaaattgcaaggatggcagggacctttcctgtgccaaagctgcaacgaaaagaaagacgcaattgaagggaaacgacctccaagagattcttga</cdnaseq>

Protein Sequence

<aaseq>MAMTAAAVTVPLGVLLRREVTSERMERPDVLCGEAARSRKGEDF TLLLAEAGERVAGDPSTSFSVFALFDGHNGSGAAMYAKKNLLNNLLRAIPSGLSRDEW LAVLPRALVAAFVKTDKDFQAVAETSGTTVTFVVIDEWVVTVASVGDSRCILESADGS LYHLSADHRFDSNQDEVQRVTACGSKVGKLNLVGGPEVGPLRCWPGGLCLSRSIGDMD VGECIIPVPHVKQVKLSNAGGRIIIASDGVWDDLTFEMALECSRGFPSDIAANRIVNE AIHPRGLRDDTTCIVVDILPPEKLAPSPPTKRQGKIVFNNMFRRKHTDVSFILDREYA EPDEVEEIFDDGSAMLSKRLAAGYALQSMFEPFSCAVCQVQLKAGQGISVHSNPLQHE KLQGWQGPFLCQSCNEKKDAIEGKRPPRDS</aaseq>

Gene Sequence

<dnaseqindica>4528..4535#4201..4403#2599..2831#2391..2516#2041..2148#1432..1495#1208..1361#688..859#48..248#agcgcgtgatcgtgcagtttcggggtgagggtttgggagggggagcgatggcgatgacggcggcggcggtgacggtgccgctgggggtgctgctgcggcgggaggtgacgagcgagcggatggagcggcccgacgtgctgtgcggggaggcggcgcgcagccgcaagggggaggacttcacgctgctcctcgccgaggccggggagcgcgtcgccggcgacccgtccacctccttctccgtcttcgcggtaccgcattgcccctatgcacgcgccccgaattctggaaggttctagagtacctccgccgagttgtgcgtggcctgacgacatggaggccactcctgtacatggctgccactctgcatttcctctttgttcatttgacttgtccacctttctctcgtcgactacaaattttctcaatttttttttgtgcatgccgaccaattcaggtgcaagcatgtgacagtaacactgcgctacatatgcccagatgatgatcgtagttaatttgattcacactacgttacagtgttcaaacatggactgaacatgtcaaataattttgtgttgctatgatgactccgatgctgtcatttgatttgtttagtggttgagtagtcgtattttactggattccttgacttgcgttgatcgatcattgataactgtgctctgttgatagctatttgatgggcacaacggatctggagcggccatgtacgcgaagaagaatctgttgaacaatcttctacgtgccattccttcaggtttgagcagggatgagtggcttgcagtgcttcctcgtgcgcttgtcgcagcatttgtcaagacagacaaagatttccaggcagtaggtaaatcaggccaattcctgtcaagcttacgacattcaatatttaagcagtactttgataaaacaggcaaacgttgtaatctttcataatccatcactatttagcggtttgtatttccattttggacgaagtgaagcatgaataaaacttttgctatcatcactgttcattgattggatgccatattatcagatttgttgaacagtacaatctcattattaatgctaaatgtaggtgcaaaaatgctgctcttctttaagatgtcttttaggttatagccttataggtacctgtaaagttgagtgatgctttttctctttactgaagcactctcttttgctgtttcagcggaaacttctggtaccactgttacatttgtagtaatagatgagtgggttgtaacggtagcatcagttggtgattcacgttgcatactagaatctgctgatggttcattataccatttgtcagctgatcatcgctttgactccaaccaagatgagtaagttttgcctgcctttaatgtgtatttttaaagaactgccaatatttacaacatactcttttttcagggttcaacgtgttactgcatgtggaagcaaggttgggaaactgaatcttgtaggtggcccagaggttcgacactttcaccctgaatcctttgttttcttgaattggatatatagtgtggacgtgttttgtccaaattgctgctttgatgattcacattgttcacagtaacctgcagctcttcccaagttttagttctcaattatctgtgctttaatattactccatgcccttgttatgctgcttgtcaaacaatgtcctagcttatgatatgataggttaaatttctttttttaagaccacttgttttcaaacataaagtagttctatttcaaaattctactatttttattataatattttattctgtatagcattgaggcattgagttcttgtgcatctaaagtactagtgtatttatgagggataattctttatttctcaatctttttaattaagacaatgtttatcttatcaccattatgtaagtctgtaaatccctatattaattatcaaattgtgttcaatttgttgtgtggttgcctggtcttctttgatctatatgtatactttgctgtagtattctagaaaattgtcatttgcgtttacaggttggtcctctaagatgttggccaggtggtctgtgcttatctagatcaattggggatatggatgttggtgaatgcatcattcctgttcctcatgtgaaacaagtgaaggtcagctcatttgaaaataatgctctgcacttcatttgtcttatactcttattgttccatctattatgtttgcatgatttactgctcatcagataccataaaaaaaattcttcttcaggacagtatcgcctataatatttccaccacgtttgtagttaatgtgccacgtgcttttagttatgatttacatgtttgcagttcactgtcgcactatttgattttctgttgtgctgctgttacagctatccaatgctggaggcaggattatcattgcaagtgatggtgtatgggatgatttgacttttgaaatggcacttgagtgttctcgtggattcccatcagatatagctgccaatcgaattgtgaatgtaacagtctgaactttatcacttcccttcatgacaaacctttaggccttcattttgtgatatatattttttaattttgaaggaagcaattcatcctcggggactaagagatgatactacctgcatcgtggtggacatattacctccagaaaaactagctccaagtcctcccacaaagaggcaggggaagattgtattcaataatatgtttcgccgaaaacatacagacgtatcctttatactagatcgagagtatgctgagccagatgaggtggaagaaatatttgacgatggttccgctatgctttctaaaaggtactatgttaaccagcttctcataacctcttcacttggagtaggggaactaagagcgctatgggtaattccaagaagatgcatatatgttttaaacttttaatgaacactagtaggatatctattatttttgaaagtccatgcacactcaatagacacatcaacataacaaaatgctatttagtgccaattactgcactttataaataataaatactgcatcgtgatgatgatgttcttgtgagtatcaacattccactgtaacaggttatatggtaaagaaacatacttttcagttaatgtaggccacagaggtcttggatttatgatgattcgtcatttagatctgatactaaattgtcttatgtggacaacaaacatatcttgctgtctgctaaaggttagtaggattttaaggaattattgggaacatcacatgagttggcagttggcactgctgactgatggtgtcaactatgcaactccatttatgtttccttgcacattgtagtcaatattgtctgctggttccttttccaaccccactccattggatcctttcttttttttttctctggtcgtttaagtattgaattattgttgtcctgaaaccagccagatctggttgatacatgttaattcttggtcataacacactgcagtagtgtagtacctaatcacttttaccaaaccttgtcaacacccttaggctgtgttcgccattccttgttcccaactggaacagtacgcacagaaaacggaacggtctatttgcgcgtgattaattaagtattagctattttttttaaaaaaaggattaatttgattttttttaaagcaactttcgtatagaaacttttttttttgcgaaaaacgcatcatttatcagtttgaaaagcgtgcgcgcggaaaacgagtgagaggggttgggaaaaggggtgccaaacacagccttagatgggttttatgaaaaaccagaacgcatgagatttctggccatttactgaagctaaaaggttataataaatagataacggaagttcagggtttgtttgatatgctactcatttggttattgttctgcagaactcaatgcatttcatctcttatctcctgaaatgatcaggaatatatttgtactatgttggtatttaatagattattgatggatcttgtgttatattttctagataggttcagctaaaagtttcaaatctttcattcatcttttcaatatcctcaaactcagaactgtttggtctttaatatgcaaaaagagagtattcccatatttcttttcgcttgcataccttataatgccagtttttgagacattatggtgttgatttctgacatttttgttattcaggcttgctgcaggttatgcactccagagcatgtttgagcccttcagctgtgcagtttgccaagtacagttgaaagctggccagggaatttctgtacacagcaatccattgcaacacgaaaaattgcaaggatggcagggacctttcctgtgccaaagctgcaacgaaaagaaagacgcaattgaagggaaacgacctccaagaggtattgctaattcattatgttattttcttggttctccgaacaacattctgtgtttacagctaaagctgtcttatgtaatctttagattactgatttgttcttcgatgcatttctgcctattcagattcttgatctacactctacaataaccatggttttgctgagtggtgacaagtggcaggcccatttgttggagacattccttcatacaatcaatattcttttgttcgttactagaaacactagtcaaaccagagttattttgctacattgttctctgtagtcaagtaatacaaagtattcttggcaaaatagattgaagatttgttaattggttggattaacatagcactatctaacaagttggattaacatag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0459600, RefSeq:Os09g0459600