Os07g0295400

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Revision as of 08:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0295400| Description = Conserved hypothetical protein| Version = NM_001065942.1 GI:115471616 GeneID:4342961| Length = 5659 bp| Definition ...")
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Gene Name

Os07g0295400

Description

Conserved hypothetical protein

Version

NM_001065942.1 GI:115471616 GeneID:4342961

Length

5659 bp

Definition

Oryza sativa Japonica Group Os07g0295400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:11560191..11565849

Sequence Coding Region

11560247..11560684,11560773..11560826,11560926..11560985,11561084..11561194,11564465..11564530
,11564608..11564694,11564793..11564894,11564992..11565141,11565241..11565384

Expression

GEO Profiles:Os07g0295400

Genome Context

<gbrowseImage1> name=NC_008400:11560191..11565849 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:11560191..11565849 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttcggcaccccggcttcgtcgcccctatttgggaccccctccaccaccccggcattcggcgccccttcctccacccctgcattcggcacgccctccaccaaccccgccttcggcaccccttcctccacgccggcgttcggcgcgccgtcgtccaccccgtccttcggcaccccctccaccgcgcccgcgttcgggaccccgtcctcgaccccggcgttcggcgcgccctcctcgacccctgccttcggggcgcccttctcgaccccggcgttcggcgtggcgccgtcgccgtcgccatcgccgtttgggttccagcagcagatgacgccgtccccgtcgccgttcgggttcgccggtgggggcggcgggcagatcaccacccagatggcccccgtcgcgccgctcccgctctcgccctccgaccgtgacatccaggctatcgtggatgcgtacaaggaggatcctggaaaccctcgttatgctttcaggcatctgttgtttagtgttacagagccttcacaacgggtgaagccagttgcggcatctgatatcatgtgggcagaagctatggggaagcttgagggcatggatagttcggatagggagaggctgtggcctcaactcgtgcagggatttaaggatctttcctaccggcttaagcttcaagatggagttcttgtctcagattctgatagattgagcatgacacgcgacaatgttaaaaagttgcaaagacatttccaagctgacacatacccatggatccaacggctgaagcagcaagagttggttattgagagacgcctcttaaggataatgagaatagtggaggcattagagaatcggggttatcgtattccactaacgaaggaggaagctgatctgtatgaacgactggctgttatagcaaagcagctaaaaggacccactggtgatctgcacaggagagtttataatcttctttcaacttctcgccttcttgctagtgctggtggcactgctggtcctatctatattcctagctcagcgaaagttgacgaacagagtgttgctgagcttcttgaggccttacaacaacagacggaagctgttgccaagttgggcaatgtgatgaaaagagatacaagagacttggaaataatactttcggaagacacggacatggcagaagacagtgttgggagaagggcattgaagatgtataactaa</cdnaseq>

Protein Sequence

<aaseq>MFGTPASSPLFGTPSTTPAFGAPSSTPAFGTPSTNPAFGTPSST PAFGAPSSTPSFGTPSTAPAFGTPSSTPAFGAPSSTPAFGAPFSTPAFGVAPSPSPSP FGFQQQMTPSPSPFGFAGGGGGQITTQMAPVAPLPLSPSDRDIQAIVDAYKEDPGNPR YAFRHLLFSVTEPSQRVKPVAASDIMWAEAMGKLEGMDSSDRERLWPQLVQGFKDLSY RLKLQDGVLVSDSDRLSMTRDNVKKLQRHFQADTYPWIQRLKQQELVIERRLLRIMRI VEALENRGYRIPLTKEEADLYERLAVIAKQLKGPTGDLHRRVYNLLSTSRLLASAGGT AGPIYIPSSAKVDEQSVAELLEALQQQTEAVAKLGNVMKRDTRDLEIILSEDTDMAED SVGRRALKMYN</aaseq>

Gene Sequence

<dnaseqindica>57..494#583..636#736..795#894..1004#4275..4340#4418..4504#4603..4704#4802..4951#5051..5194#acgccccgagaaaaccctaaaccccccaaccctcgccgccggcaaccgccgccgccatgttcggcaccccggcttcgtcgcccctatttgggaccccctccaccaccccggcattcggcgccccttcctccacccctgcattcggcacgccctccaccaaccccgccttcggcaccccttcctccacgccggcgttcggcgcgccgtcgtccaccccgtccttcggcaccccctccaccgcgcccgcgttcgggaccccgtcctcgaccccggcgttcggcgcgccctcctcgacccctgccttcggggcgcccttctcgaccccggcgttcggcgtggcgccgtcgccgtcgccatcgccgtttgggttccagcagcagatgacgccgtccccgtcgccgttcgggttcgccggtgggggcggcgggcagatcaccacccagatggcccccgtcgcgccgctcccgctctcgccctccgaccgtgacatccaggtccgcaaccctagctgaaatcttggccttcttttgttgtttgaacaccgaaacggctcacaatttcggtgctctctgatgcctgaaggctatcgtggatgcgtacaaggaggatcctggaaaccctcgttatgctttcagggtgagattttccttctagctgtgctcccatttatgctctgggaatgagcctcggatttgatgtgatttggttgacttgttggtctctttattccggcagcatctgttgtttagtgttacagagccttcacaacgggtgaagccagttgcggcatctgatgtaaggaattcgataaatgttttaattaactttttaattttcttttgtggtgctttggttggatatactaatatgtatttgctactttgttgatgtagatcatgtgggcagaagctatggggaagcttgagggcatggatagttcggatagggagaggctgtggcctcaactcgtgcagggatttaaggatctttcctaccggcttaaggttcggcatttagattggataccttctatctgaactcagtgaagaaattatattttaagataaatcgcttattttctttatcctcagtatatggctacagaatgtatgcaagttttaaccagtgaagttgattaaaaatgctaacatgtgatttataattgcgttgcattttttttttaataccgcagtagggtaagattttttctcggagatgtcaagttgcgttgacaagctgaccacatttgactatttcgcctagaaaatgtttgtgtttttcagttttttttccatttaaattcatttcctacccaacttctggatcaaaccttgatttctttctgtgggaggtgactttgaacaaaatggtaatgcctgctaggctgctgaactatttcagaaacaaaacattttgttttatcatactggctgcgttataccctccttgaaatgtatggtgaactggtgacctgaattaaatcaactaataaatgtcatgcatgttgatgtattgcatacatgcatatctgtagtattttgtttactgatatattttctgagcatatacatacttttctaataggggatggtttccactagctaaaatttagatgttcaattctccagatttaattttgaagtatggcaagggacttgtggatcacaagtgcacaagatatttttttatgtcaactttttcatgcaagtggttggctctgtatctaggttaccagatgacaccctgcatgttcttgtgggatatttatgtatacactgcagttgcaaaacaacaatatatggattgaaacttgtaaatttgttgagaagtacctaaaatcgaacatccaaacattgattaatatgggctaggaagattaggtgataatctgaagcttgaaaagcacaatctaagggtgagaaagattagtgatggtgcaatttcaagtggtagctttatagcaataactaccactaagtgggtttcaactgtatagtatatatagatagatgtgtttacatacacttctgctgctatctagttatcatcctacaagtggtaggggttgggagtgaaaaaaaagtgaagtataaaaaattatagcattttaaatagcttaaagctttatgtatccgagtcataatgttaggggacttatacttcgggcatctgcactggctagagaactagcgcgcatgtcccgctcggccctgtcgctatacacattagttagccccgataagcaacatggctggtatggacacgatcaactaagcgaccaattcggccacggcccaagtgacaacatatgtaaatgcatggttggcatggctaaaaatttagtcaaaattttcaaatttaaaattcaatgttatgttaaaaaagcttggtcaaacttgttgacggtaaaaaaatacacacatacactacatcatggttattaaggcgtcgctatagcgtcgtggcgttcccagaagggcatggcgtccttccgccataggctacctccgccttacaggcataaactgaaggaaagagggtaagagcagaggggaaaagtctgttgtcttgctgctggtcctccctactcccttgcatcgccctctccctttcttgtgctgatggggagtacagggagatcaagagaggcaccacctgcggctgctgtgccacatgagagagaaaaggtggaggagaggaggctgctggctgcaatagaggagagaaagggtaggatgatggtgtatgtggtgtatgcttgctgcatcgtgcacaaggagagagaagaaaggtggaggagaggagcctgcagtagtgctgcacaatgggggagagagatctagatgaaggtgaggtgacggctgttgggagggaagctgttgggtagggttaaaatgttgtttgctaggttaagagagtaaagtatttggactaggctaggtaagtgctactattgggctgggctgtggtgaatagagtaccccattagtatttttagggcccatattacttaatactttctattttttcaatgcacttaaggcgtcgtcacgccatacgccttatcattatggcagtaaggcggtggtgggtcgccatacttcgccataccgccttaataacactgcactacatgcatgcatgcacgtaccgtgtcaattcttaaactgcaattagcaactaattacctcaatataacttgagtccttgcaagttcgctgttcgtgacacatacaacagcacacatggcctagtaggcccatcctcgtatgcatcagcccgtgctggaattgtgtgccacgaacgcatctagcgcgtccgcaccgattagtcttttcgataattttatccctcttattattgaatttgtaacttctcttcaagtctacatgtccttttgacaaactgatgtaactccttactggcacatgacgtgttgcattcatcaaattgttgaaatgctggtgtatcccttggaaataacaaaaatgtagcaagcataatgctctgcaataattgttttagcacattttctttgtgattaatttcaattgtttggcctgaactcaagtgattcagggtagtcctgacatcaattcatttttgctcatttgtgtgtgcagcattatagttctcataaatcgtttgatggtggtaaaactggactgctttaaagtgtctgtgcaatatctttacattgaagttgggctttgcatggtttttaaatttgaatcaatatctgtgtttccgtgctatattttattttataggatgcttgtaaaaacctttaccaagatgaaaatatggtgctgtactggatgacttctttataccacatgcaaatatgacgtgtggttggagataaacctatattttataattcaaatgaccaacaatttatccgctaccagcagtagataaaagatctattggccgactctttttggtggttgcactccctggagacataagattgtacttcgtatgcatttgttgtatgtcaagccatagattgttgtccgttcctgttttatttgggtacttttagccacctccatttgcatttcttgtttgaaaaaaatatatgaaaagatgtcagtaatagtcatcgttctacactagtccatttgcttttattgtttgcaaagaaaaaaggaaaaagatttagtaacaatcaccactctacagtagttgtgcatttgtcagtccatgaaatacataattctcattgaccagacctgttgactctacagcccttgtttttctgtgcacagcttcaagatggagttcttgtctcagattctgatagattgagcatgacacgcgacaatgttaaaaaggtatgacttcatacaagtaattttcatgtgcacctcccaagaatcatttatctcgtgtaacaaagattcaattatagttgcaaagacatttccaagctgacacatacccatggatccaacggctgaagcagcaagagttggttattgagagacgcctcttaagggtgatatttcttctctatgttcatttgaaaatggcggtgggaattcattgttcatggcaacgtttctaactattgtcatttttgaactggtaaaaaagataatgagaatagtggaggcattagagaatcggggttatcgtattccactaacgaaggaggaagctgatctgtatgaacgactggctgttatagcaaagcaggttagttttcttttgccctcatattatttctaattttggctggttagttttcttttgccctcatattagttctttatattgaatcctttgtgtacagctaaaaggacccactggtgatctgcacaggagagtttataatcttctttcaacttctcgccttcttgctagtgctggtggcactgctggtcctatctatattcctagctcagcgaaagttgacgaacagagtgttgctgagcttcttgaggtatcttatgtgtgggactgatttgattcctttgtatttgatttttagatggcaggccttgtttcatctcagaagatgtaacgttctgcattattacaggccttacaacaacagacggaagctgttgccaagttgggcaatgtgatgaaaagagatacaagagacttggaaataatactttcggaagacacggacatggcagaagacagtgttgggagaagggcattgaagatgtataactaaaccaaattcttcattcaatgcattgacataagcaggagatccttctttggtcaagggtttagagtgtcggaaagatggcagccaaacgaacgtttgaccttaaacgtctaccgttgcaaacgactaaacgagaatttgttctgtttggaagggccatagtggaattggcggtttgtgttttggtgacggcaaaaacaagtcaccagtgtgacaaaatctgatgttggctgtggcagttgtgtaaaccacagccacctgctaagccctcttaaattcgtgagttagtcagagatcgattgcctgcatgtaacacttgtataatgacattttagattatttagatgagcgtctttgcggactagatccgatatattgtcgcagattgttgtaggtttaaacggagcttagtttggtgatgtgcccgggaggctgcatgcaaggtttcaaaatgcgaagagctaatcg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0295400, RefSeq:Os07g0295400