Os07g0406800

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Gene Name

Os07g0406800

Description

Eukaryotic-type DNA primase, large subunit family protein

Version

NM_001065967.1 GI:115471666 GeneID:4342990

Length

5086 bp

Definition

Oryza sativa Japonica Group Os07g0406800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:13234738..13239823

Sequence Coding Region

13236032..13236064,13236155..13236262,13236346..13236439,13236670..13236755,13236832..13236906
,13237168..13237227,13237326..13237385,13237461..13237550,13237672..13237719
,13237802..13237850,13238105..13238169,13238259..13238342,13238447..13238466
,13238586..13238640,13238730..13238789,13238867..13238948,13239081..13239184
,13239399..13239460,13239577..13239733

Expression

GEO Profiles:Os07g0406800

Genome Context

<gbrowseImage1> name=NC_008400:13234738..13239823 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:13234738..13239823 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagatcgtgagatcccaccggcagatcgcggcggaggcggcggccggcgtaggatgtggcggcggggcgggaggcctgccaacctaccgggtggcgccgcagctggaggtgcggttggaagagtttgagctcttcgccatcgaccgcctccgagtattgaaggggatcgccgacgggctctcgcgagggaagagaccggaggaaatggagaaattggtcaaggaattgtggaaagcccatatgaggcaccaggatcctacagagactttgaacaaggacataatatctcactttgttctccgtcttgtctactgcagaacggaggagctgcggaagtggtttctctccatggagactacgctttttcgctatcgctttcggctcgagagtcctgaatcacagaggatgcttatgagtgagtttcgacttccatacaaagcattgccacactcggaatttgaggctgtcaaagacaagttgagccaagttgcacgcaccattggtcaatctgcagctgttgaatctgtgttcttcaaggtgccttttgaagaagttccagatcttgttgccagccgccgagtatttctttcaaaaggatatgcttatgttgcgatgagtcaggttgtttcgcttgtggttacccaattccgctgcaatatctcgaaggcacttgttttaacaaatagaaaatggacggccaccattaaggaacaagaaaaggataggttgactcctattgtcgaagcattgagtaatgcatattttggacctgattactctcagccaaaggatgctgttgagatttctctgaaggatattgaccaactggctaaaacttctttccctctttgtatgcgccacatgctagagaagttgagagaaaaccatcatctgaagcatgggggcagaatgcagtttggtcttttccttaagggagctggactaaagttggaagatgctctagcattttggagggcagagttttctcagaaggttggctctgagcgatttgacaaggaatatgcctacagtatcaggcataattatggaaaggaaggaaaacgaacagattacactccgtattcatgtcaaaagattatctctgcaacacctggtgttggtgatcaccatggttgcccttatcgacattttggtgaagacaacttgagagcagctctcaataaaatgggaatcagtggtcatccattagaagagataatggataaagtgaagaacaggcactaccagctagcttgcacgatgacttttgaggcagaacatggtgtctcatgtgatactggaatcaatcatcctaatcagtatttcagtgaaagccagaaagtcttgaaagcaaagaatcaagcagtgcagagccaaggaacaacctaa</cdnaseq>

Protein Sequence

<aaseq>MEIVRSHRQIAAEAAAGVGCGGGAGGLPTYRVAPQLEVRLEEFE LFAIDRLRVLKGIADGLSRGKRPEEMEKLVKELWKAHMRHQDPTETLNKDIISHFVLR LVYCRTEELRKWFLSMETTLFRYRFRLESPESQRMLMSEFRLPYKALPHSEFEAVKDK LSQVARTIGQSAAVESVFFKVPFEEVPDLVASRRVFLSKGYAYVAMSQVVSLVVTQFR CNISKALVLTNRKWTATIKEQEKDRLTPIVEALSNAYFGPDYSQPKDAVEISLKDIDQ LAKTSFPLCMRHMLEKLRENHHLKHGGRMQFGLFLKGAGLKLEDALAFWRAEFSQKVG SERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISATPGVGDHHGCPYRHFGEDNLRA ALNKMGISGHPLEEIMDKVKNRHYQLACTMTFEAEHGVSCDTGINHPNQYFSESQKVL KAKNQAVQSQGTT</aaseq>

Gene Sequence

<dnaseqindica>3760..3792#3562..3669#3385..3478#3069..3154#2918..2992#2597..2656#2439..2498#2274..2363#2105..2152#1974..2022#1655..1719#1482..1565#1358..1377#1184..1238#1035..1094#876..957#640..743#364..425#91..247#acaaacgcgccgacggagagacgggagggcaacgggagggcttagcgcgtcgctcccaacggtgattcgagccaagacctagccgccgccatggagatcgtgagatcccaccggcagatcgcggcggaggcggcggccggcgtaggatgtggcggcggggcgggaggcctgccaacctaccgggtggcgccgcagctggaggtgcggttggaagagtttgagctcttcgccatcgaccgcctccgaggtgcgggcgcctcctctcccctccccactgtggcggcgtttgtagagtccttttttcctttccttcctcgcattctgtgaacgatttgacatctagactgctgctgtgttggtcagtattgaaggggatcgccgacgggctctcgcgagggaagagaccggaggaaatggagaaattggtgagccgtcctctctctatatatctcgttgcaattctaccacggagatgcgaattccttcatgtatttggggcaaattaaattccatttcttgctggacttttcgatttcaatcttgaacataatttcgcggttagagtttcaagctctagttaccaagtttaccatattttctttaacagtaatcctatctgttttccctccttgtgcttaggtcaaggaattgtggaaagcccatatgaggcaccaggatcctacagagactttgaacaaggacataatatctcactttgttctccgtcttgtctactgcagaacgtaagcttaacattcgttacacttgagtacttgacattccatagacagtaagccggtggtttgcttctggtgctttcaagtttgaacctttgactaacttctcaaaggctttgtgctatacccgcattctagggaggagctgcggaagtggtttctctccatggagactacgctttttcgctatcgctttcggctcgagagtcctgaatcacaggtgactttctgtccttttcttgcatacaaggaaagctatcatgctttaaccgttccttgccacactgtatttttcagaggatgcttatgagtgagtttcgacttccatacaaagcattgccacactcggaatttgaggtatgtgttatggtcactctgttgacttggaccttgatgatttcagtaatatttacagtagtgagatgttcttgttttcacgtttttaggctgtcaaagacaagttgagccaagttgcacgcaccattggtcaatctgcagctggtatggaacatcttactatgtgatacctgttctttatgttgtttcagcacaatggtgcttcgctgcttgcaggtgtgatctttcacttgctaagtttgttctatgttttcgttttgcagttgaatctgtgttcttcaaggtatttgcatcagtttattttacctcttcaattccatatccagtagaaaaaaattgttcgtgtgattacccagtctaaataaaccttgttcgtatccatgtaaggtgccttttgaagaagttccagatcttgttgccagccgccgagtatttctttcaaaaggatatgcttatgttgcgatgagtcaggtttgctgcgaaaacgagactggaaacttctatgtactttttggatgttgtttcctgcccattctaaacatacttgtataatttaataggttgtttcgcttgtggttacccaattccgctgcaatatctcgaaggcacttgttttaacaaataggtacatggtacaaatgttctactttactctgcctagctacatatcatgtccgggaagtgtgctttcttagttctttgctggaaaaattgttgcactcttaggtgatataattaggaacattaacagcattgtctactatttgccaataatttacatagaacaaaagccccttgacagttggatttatttctcaacttagaacactctttagtacaggctgtactaagctataatataaataattcgatgtacagaaaatggacggccaccattaaggaacaagaaaaggataggttgactcctgtgagtatcaattaaccacttcccgtattcctccagacaatcttttcataacttttataatccacactttttatcttaacagattgtcgaagcattgagtaatgcatattttggacctgattactctcaggtatgttgctttatctataggtgtttttccagatattgttaatgggattttcttcaatgctaatgtttactatatttgttattaattgtctggcttatcaaatatccaatattctatacagccaaaggatgctgttgagatttctctgaaggatattgaccaactggctaaaacttctttccctctttgtatgcgccacatgctagagaaggcaaggcaccttaaaagttcacatactttgcttaccttatgatcaggttatttagtgattgcttttatttttcagttgagagaaaaccatcatctgaagcatgggggcagaatgcagtttggtcttttccttaaggtaataacttaatgaattatcttaatactggttctgttatcagtgaacacttattttatttatgtcacattaacttgcttcttaaaactatggtttagggagctggactaaagttggaagatgctctagcattttggagggcagagttttctcagaaggtgcctaattttctttcagaatgtaaacagcaactatgttttggaaatagcacatgcaaaccttttctgtttctttacaatacaagtaagccgtgtcaagaaaattttctataggatcgtgtactgcattcttatctatagtgttgaacattgagttaaccagtaagaagccccaaactaaacaagtaataccccgtgttgcattgtgcaagccatcacaaattatattgcttcactgatgttgggttttctttggataaggttggctctgagcgatttgacaaggaatatgcctacagtatcaggcataattatggaaaggaaggaaaacgaacagtaagccccttgttctatttttgttgcttgtttggataatcaacttattcatctctcagacaaatggctcctccaggattacactccgtattcatgtcaaaagattatctctgcaacacctggtgttggtgatcaccatggttgcccttatcgacattttgggtataatctcattctaccatgccattaacagagtagttaagcatttatttgttttatggttaactttctgttatcagtagactatttatcgaatatgtcaatgggacatgggatttcatatcctaaaactctctgttagcagtagactatttatcgaatatgtaaaagaacctacagctatcactgtctttgtgagttacatgtgtccttttcttgtgtgatatttctagtgaagacaacttgagagcagctctcaataaaatgggaatcagtggtcatccattagaagagataatggataaagtgaagaacaggcactaccaggtactgcacctcacagttctacctttaataagcaatcttctaaacttcgtctgcttgaaccatctgagttatgaaatacacagctagcttgcacgatgacttttgaggcagaacatggtgtctcatgtgatactggaatcaatcatcctaatcagtatttcagtgaaagccagaaagtcttgaaagcaaaggtgggtcaccatagttgatttgcattcatttgtgcattttgtcagcatatgagatgttcaaattgacagtaatttcgttttattccacagaatcaagcagtgcagagccaaggaacaacctaaactgtaatgctgctggcaaaagtcagtccatccaaatgcggaatttcaggtttcgacactactagtctgtcagctgttgcgatgcattgttttctaatatctactggttattggcaacaaatttctaatgttcaattgtgcgaacataaacatcattctcaccctttgcttttttatagctatttttcagtattcagcaatcaaatccatgatatgtgtacaattggcagcaattctaagttatttttcttttaatttctgtttttagttttgatgaaataattttgctgtttttccatatgagatgtttttactcctagatttaaccatgaattaaagttttactcatggtcacattggacgattttcaaatgcccattttttgattcaacggtagtttctaggtttgcactacaaattttcccatttatctttggcttctaaattgcccatgaagttgtggctttgcattctgttcaagtgtgcctcgtcgtttggcctgtctattgttattggaaaggggatataactctatgctaagttctgatctagattttaagagagtatttttctgagttggtttctatgaacttcctgcaaaattcttactctaaacagggttcaaatatcagaacctgctattcctaaactaaggatcattgctgtaatttatacactacactagcaagactctttgaaacttgtagaataataataataccgattcatttgctaatactactgggatgtctgtaaataagatttgcgttaattgtgtaatcatgcccaaaaacagcatgcagaatttttgcatacaaggtaatttctttcctaggaatgctacaactaattccaactgtctaattattctatctacttgacagttcgtatcaagatttcatccttgctgctaatgatatggagaacaacaattactaatctttattctgatgcctagatggaattctattgctttgcacggtttcagaattccaacggctgaatatgtcatcccccaaaagtgatggatgtccctgtaaacatgacttgagcacagaaagtagatagaaccgtacaagtacgtacttgtcaaaaccaaaggaaaccatgattatggatatcaaattattgtttgtgttggtaagtggtaactatgtaaccatggtaactatgaccagggggagttgtgaacacctcatcagttaagttgcgctgtaatgtttctgtaatcgaaaacttgttcgacaaaacaattgcgcttccagatatgcaatttcattaatctgcttgaact</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0406800, RefSeq:Os07g0406800