Os07g0408500

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Revision as of 08:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0408500| Description = Similar to Rac GTPase activating protein 3 (Fragment)| Version = NM_001065972.1 GI:115471676 GeneID:4342995| Length ...")
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Gene Name

Os07g0408500

Description

Similar to Rac GTPase activating protein 3 (Fragment)

Version

NM_001065972.1 GI:115471676 GeneID:4342995

Length

2654 bp

Definition

Oryza sativa Japonica Group Os07g0408500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:13365525..13368178

Sequence Coding Region

13365726..13366373,13366463..13366693,13367252..13367371,13367508..13367628,13367760..13368103

Expression

GEO Profiles:Os07g0408500

Genome Context

<gbrowseImage1> name=NC_008400:13365525..13368178 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:13365525..13368178 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgaggcggtgctggtgtccaatcatgggtgcagcggaggcggaggaagagttggagtcggagtcaggggagcgggaggaggaggacccggcgaggggaaggcggaggggcagcaggggcaggtgctcgccctgctactcgccgcgctacgcaggtcggtggtgctcccgtgccagatggccgacgctgacgacccggcagcagtcgcgtgggggatggagatcggctggcccaccgacgtccggcacgtcgctcacgtcaccttcgaccgcctcaacggcttcctcggcctccccgccgagttcgagctcgagatcccgggccacgtccccagcgccagtgcgagcgttttcggcgtgtcacctgagtcgatgcagtgctgcttcgacgacaacgggaactcggtgcccaagattctgttactcatgcaggagaggctgtacgcgcaggatggcctcaaggcagaagggatcttccgtatcacccctgagaacagccaggaggagaatgtcagggagcagcttaacaggggccttgtgcccgacgacatcgatgtgcattgcttggcaagtttgattaaggcctggttcagagaactccctgagggtgtactggatagcctctcacctgagcaagttcttcactgcaacacagaggaggaatgtgttgagctcgtacggcttcttcctccgacacaggctgcacttcttaactgggttgtagaattcatggctgatgttgtcgaggaagaggagtcaaacaagatgaatgcccgaaatgtcgctatggtctttgcacccaatatgacgcagatgtcagatcctcttactgctctgatgcatgctgttcaagtgatgaatcttctcaagacattgattctcaagacgcttagagaacgtgagcatgatgaaagcgaatactcagcaatttcatctcagtcatcttcatctgatgaacttgatgagatgcatcatcatgttgaacaaggtggtgacagtggtagtgacactgacaattttggagatgatggttctcaaagccaaaaagatgttgccaaggtccttcaacaaaatgttgtcaatgaacagccgattggtgcatccaggaggcacacgtcaattgatttccggttgccttacattagctacggcagcgacgatgatgtgtcgcccaatgatattgaagaatgtttcttaaggaggttagaatggaatgcagtgagcaaagatgcttctgagattggcagcatcactgttcggtccaaccaagaggcagggcaactaagcttctccgaagaaaatgatgggtattacagtacagattatcaatctaggaacatactcctaaaagattctgttggtatccaaagcactctaccgagggaaaccgaaagcagggctgaaattacaaatgacgaggtacaagacggcgctgaagtggaggtaactctcgagcaataa</cdnaseq>

Protein Sequence

<aaseq>MGEAVLVSNHGCSGGGGRVGVGVRGAGGGGPGEGKAEGQQGQVL ALLLAALRRSVVLPCQMADADDPAAVAWGMEIGWPTDVRHVAHVTFDRLNGFLGLPAE FELEIPGHVPSASASVFGVSPESMQCCFDDNGNSVPKILLLMQERLYAQDGLKAEGIF RITPENSQEENVREQLNRGLVPDDIDVHCLASLIKAWFRELPEGVLDSLSPEQVLHCN TEEECVELVRLLPPTQAALLNWVVEFMADVVEEEESNKMNARNVAMVFAPNMTQMSDP LTALMHAVQVMNLLKTLILKTLREREHDESEYSAISSQSSSSDELDEMHHHVEQGGDS GSDTDNFGDDGSQSQKDVAKVLQQNVVNEQPIGASRRHTSIDFRLPYISYGSDDDVSP NDIEECFLRRLEWNAVSKDASEIGSITVRSNQEAGQLSFSEENDGYYSTDYQSRNILL KDSVGIQSTLPRETESRAEITNDEVQDGAEVEVTLEQ</aaseq>

Gene Sequence

<dnaseqindica>1806..2453#1486..1716#808..927#551..671#76..419#gaggagcacatgctgtcccgttgcttagctcagctcgacagccagtgaagtgaggagacgagaagagcggtcgccatgggcgaggcggtgctggtgtccaatcatgggtgcagcggaggcggaggaagagttggagtcggagtcaggggagcgggaggaggaggacccggcgaggggaaggcggaggggcagcaggggcaggtgctcgccctgctactcgccgcgctacgcaggtcggtggtgctcccgtgccagatggccgacgctgacgacccggcagcagtcgcgtgggggatggagatcggctggcccaccgacgtccggcacgtcgctcacgtcaccttcgaccgcctcaacggcttcctcggcctccccgccgagttcgagctcgagatcccgggccacgtccccagcgccaggtcagtactagtatacgttgtatgcctgccctgccgcgcgcgctggcgaaatctaagcctgcaatgattcctccggttaatgtctctcggcgttggatttaccggttaatgttcttcttgattccgtgcagtgcgagcgttttcggcgtgtcacctgagtcgatgcagtgctgcttcgacgacaacgggaactcggtgcccaagattctgttactcatgcaggagaggctgtacgcgcaggatggcctcaaggttgtatgaacaacaaatcagagtctctctcactggaattctccattaatccatttttctttggagaaatttcagttcggagctaggcgtctcgatgtgagctaagttagtaaatttaattttgttcgttatctaggcagaagggatcttccgtatcacccctgagaacagccaggaggagaatgtcagggagcagcttaacaggggccttgtgcccgacgacatcgatgtgcattgcttggcaagtttgattaaggtaataaatcctagtgtcattttagttcttcagtgcccattaattattaggaaaaagaatgtacccacatagggcagttttcttttctcgacaaggttaaatacctggatattaatggagattggtccggtaaataacttcctaagtaataataatatttgcaaagtaagatgctattaaagaatgatccttagttaaatgttattaaagaattatttaaagtcgaactaagatgtaagtccgaagatttatttaactgaaactgtagtcatttaatttttttccctctatgcgcgttcgaatttcaataagaaattgttatctccgtaggaataaattacaaagaacttctgattgggatgcagtctacataatctttaaacagccttcctgatcagaaacgctggcaccatggaaatgatgagattactaatgttcagtaccctaagcattttcaactaagtaatgggactgatctaaaacacacacactaaggattaacatttagtattatttagtttgatgttttaagtacgtatgctgcacaattttgttcaggcctggttcagagaactccctgagggtgtactggatagcctctcacctgagcaagttcttcactgcaacacagaggaggaatgtgttgagctcgtacggcttcttcctccgacacaggctgcacttcttaactgggttgtagaattcatggctgatgttgtcgaggaagaggagtcaaacaagatgaatgcccgaaatgtcgctatggtctttgcacccaatatgacgcaggtaatttttcttaccataagaatttttttacgtgatcaattgtatgctgatgcaagtgcgctaagatgagatagttcacttgcattcagatgtcagatcctcttactgctctgatgcatgctgttcaagtgatgaatcttctcaagacattgattctcaagacgcttagagaacgtgagcatgatgaaagcgaatactcagcaatttcatctcagtcatcttcatctgatgaacttgatgagatgcatcatcatgttgaacaaggtggtgacagtggtagtgacactgacaattttggagatgatggttctcaaagccaaaaagatgttgccaaggtccttcaacaaaatgttgtcaatgaacagccgattggtgcatccaggaggcacacgtcaattgatttccggttgccttacattagctacggcagcgacgatgatgtgtcgcccaatgatattgaagaatgtttcttaaggaggttagaatggaatgcagtgagcaaagatgcttctgagattggcagcatcactgttcggtccaaccaagaggcagggcaactaagcttctccgaagaaaatgatgggtattacagtacagattatcaatctaggaacatactcctaaaagattctgttggtatccaaagcactctaccgagggaaaccgaaagcagggctgaaattacaaatgacgaggtacaagacggcgctgaagtggaggtaactctcgagcaataatcagaccttcaaaggatggaggtcttacgtttcgttatcatcgtccatgtgttttaatatgatcttgtactatgattcaagccggtcaacacagggttgatgaaccttatcctagtagtaatattcttcggatgctctatagttctctgcctttgagctgtttaatgtatttgtgtgatttcattaactcgggattttact</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0408500, RefSeq:Os07g0408500