BGIOSGA009456

From RiceWiki
Revision as of 15:29, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA009456

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009456, complete gene.

LocusTag

OSJNBA0032G11.21

Ensembl Transcript ID

BGIOSGA009456-TA

Ensembl Protein ID

BGIOSGA009456-PA

Length

2899

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:39901475..39904373

Sequence Coding Region

39904146..39904373,39903900..39904059,39903687..39903748,39903172..39903331,39902972..39903092
,39902435..39902516,39902233..39902345,39901974..39902052,39901839..39901889
,39901475..39901558

Genome Context

<gbrowseImage1> name=IndicaChromosome03:39901475..39904373 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:39901475..39904373 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGGCGGCGGCGGCGGCGGCTCTCCGGCCAGCGCCCACCACCGCGGCCTTCTCCCCCTCCACCGCGAGGTCCCCGCCACCAACGCTCCTCTCCTTCGCTCCTCCCCGCTCTCACCAGCGATTCCACCTCTCCGCCACCGCCGAGGGCGCGGGCACCACCGCGGCGCAGGAAGGCGCTTCGGCGTCGGCGTCGGCTCCCCCGGTCGACGAAGCGCGACTAGCGCAGTTCGCGGCGGATTGGCAGGCGGCGCGCGCGGAGAGGGACCAGGGGAAGATCCTGAAACTGCAGGTGATACGGGCCAACAGCGGCGGGTTGATCGTCAGGTTCAACTCCCTCCAGGGCTTCGTGCCCAACCCTCTCCTTAGCCCCGCGCATTGGTGTAAAGACCCCAAAAGGCCCATTCAAGATGTTACAAAGGACCTTGTGGGTTCTTCCATTTCTGTCAAGGTGGTCGAAGTGAACGAGGAAGAAAGGAAGCTTGTCTTCTCAGAGAAGGATGCAAGTTGGTTCACTCATTCTTCTCTAGTCAAGATTGGTGCTATCTATGATGGAATTGTCGGTTCAGTTTTCCACTACGGTGCATTTGTTCATCTGCGATTTCCTGATGGAAATTATCATCTTACTGGCCTTGTACATATCTCTGAGGTCTCTTGGGATCTTGTCCAAGATGTCCGGGATTTTTTAAATGAAGGTGATACTGTCAAGGTCATAGTGGTGAACATTGATATGGAGAAGTCAAGGATAGCTTTATCAATCAGACAATTGGAGGAAGATCCTCTACTGGAGACATTGGACAAAGTTATTCCTTTGGAGGCTGATCAATCACCTAGTGCTGGGATCATATCATCTGATTCATCTCCTTCAGAAGCTGATCTTCTTCCAGGACTTGATGGTATATGTAATGAACTATTGCAAGAGGATGGTATAACAGACGTACAGTTTGGGCGCCGAGCATTGGAGAAACGTGTTGTTTCACAAGATCTGGAACTCTGGCTTTCCAGTGTGCCAGCTAAGGACAATCAGTTCAAGCTTCTTGCTCGAGCTGGGCGACAGGTCCAAGAACTATATTTGACAACCAGCCTAGACCAGGAGGGCATAAAGAAGGCGGTACAGAGAGTACTAGGACGTGTTCCTTGA</cdnaseq>

Protein Sequence

<aaseq>MLAAAAAALRPAPTTAAFSPSTARSPPPTLLSFAPPRSHQRFHLSATAEGAGTTAAQEGASASASAPPVDEARLAQFAADWQAARAERDQGKILKLQVIRANSGGLIVRFNSLQGFVPNPLLSPAHWCKDPKRPIQDVTKDLVGSSISVKVVEVNEEERKLVFSEKDASWFTHSSLVKIGAIYDGIVGSVFHYGAFVHLRFPDGNYHLTGLVHISEVSWDLVQDVRDFLNEGDTVKVIVVNIDMEKSRIALSIRQLEEDPLLETLDKVIPLEADQSPSAGIISSDSSPSEADLLPGLDGICNELLQEDGITDVQFGRRALEKRVVSQDLELWLSSVPAKDNQFKLLARAGRQVQELYLTTSLDQEGIKKAVQRVLGRVP</aaseq>

Gene Sequence

<dnaseqindica>1..228#315..474#626..687#1043..1202#1282..1402#1858..1939#2029..2141#2322..2400#2485..2535#2816..2899#ATGCTGGCGGCGGCGGCGGCGGCTCTCCGGCCAGCGCCCACCACCGCGGCCTTCTCCCCCTCCACCGCGAGGTCCCCGCCACCAACGCTCCTCTCCTTCGCTCCTCCCCGCTCTCACCAGCGATTCCACCTCTCCGCCACCGCCGAGGGCGCGGGCACCACCGCGGCGCAGGAAGGCGCTTCGGCGTCGGCGTCGGCTCCCCCGGTCGACGAAGCGCGACTAGCGCAGGTGCGGAGATGTTTTGTTCGTGCTGTTTTTGGTGCGATGTTGACGCGCGTGTGATCGAGTGAGGGTTTCGTGTTGTTTGGATGTAGTTCGCGGCGGATTGGCAGGCGGCGCGCGCGGAGAGGGACCAGGGGAAGATCCTGAAACTGCAGGTGATACGGGCCAACAGCGGCGGGTTGATCGTCAGGTTCAACTCCCTCCAGGGCTTCGTGCCCAACCCTCTCCTTAGCCCCGCGCATTGGTGTAAAGGTAGTCAGTTTCTCTAGTTTGAGTTGTTTGCAGAATTTGTCCAGATTTTTGAACCAGCTCTAGCTGCAATTGATCGCCGGATTAAGAGGTGATTGCAGCTGTGGGCTACCGTAACTGAACTCATGGTGGATGTATGGTTTTTTCCTTGTAGACCCCAAAAGGCCCATTCAAGATGTTACAAAGGACCTTGTGGGTTCTTCCATTTCTGTCAAGGTAATTAAGAGGCTTCAATTACCTTTTGAGCTACCAATTAGATTATGGTACTATACCATGCAGTAGTATAAACACATGCTGGTTTTGGATCAAAACGCTGATCAATGTTACTTTTAGTTTGCTTGTGTGGCGGAATTTCAGTATTAAACTGGGTGTCCCTCTCCAAGGAACTGTGATATTCTTTAACTTTGTTTTCTAAACTGCATTATGATTTTTTTTCAAGCACATTCTGGCAAAGTTGTATCATTGGCTTCTCAATTCTCTATTACTATGGGTACAATCTAAGAGCGGGCACCAGATTGTAGGATTCGAACTTTACACATTTTTCTTCAGAAACTGAAGCTAATTACTTTAGGTGGTCGAAGTGAACGAGGAAGAAAGGAAGCTTGTCTTCTCAGAGAAGGATGCAAGTTGGTTCACTCATTCTTCTCTAGTCAAGATTGGTGCTATCTATGATGGAATTGTCGGTTCAGTTTTCCACTACGGTGCATTTGTTCATCTGCGATTTCCTGATGGTACCCATTGGCAACACCCCTTGTCATTTTTGTTGGTAAATGTTTTGTTGATTTTCTGACAAAATCTATCCTCAAACAGGAAATTATCATCTTACTGGCCTTGTACATATCTCTGAGGTCTCTTGGGATCTTGTCCAAGATGTCCGGGATTTTTTAAATGAAGGTGATACTGTCAAGGTCATAGTGGTGAACATTGATATGTAAGTATCTAATACTTCTTTACTGTCTTCCTCCACAATTGTCAGCATGTGTATTCGCAATGTAGTTTCTCGTGATCTCATTCCATACTTTTTCAAGAAAGTTTGCAATTATATAATCAATGTTGACTGTACCAATGAAAAATAGCATATGTTTAATTGAATCTAGCGATGGAGAATGGCGCAATACACCTTAAATCTATATAGATTAGGATTTAACGATGCAATAACTATTGAGAACACAGATTGTCTTTAAGGAATACCAAGTTGATGCATTGAAATAGATCACTTATGACTCTTGAGGGCTGATGAATAAAATGAGAGGAGTTTATGATCTTTTTTTTTTCCTATCATTGCTTTCTTCGCAATAGGGCAAATCAGCATATGCTGGAAGAATTATCATGAATCAGAAAATTATGTTACATAATCTGATACTGATGCATTTCCTTCACAAATAGGGAGAAGTCAAGGATAGCTTTATCAATCAGACAATTGGAGGAAGATCCTCTACTGGAGACATTGGACAAAGTTATTCCTTTGGTTAGTTTGTCGAAAGCACGTGTCTTTGTGGCAGGTTATTTAGCTTTGTTCTTTTAAAGGTCAACTCATGCATTAATATTGGTTTATAGGAGGCTGATCAATCACCTAGTGCTGGGATCATATCATCTGATTCATCTCCTTCAGAAGCTGATCTTCTTCCAGGACTTGATGGTATATGTAATGAACTATTGCAAGAGGATGGGTATGATTTCTGTTTGTGTGTTTTTTTTTTTTGGTGTATGGTTTTTTGATGTTGATGTACTACTTTATGTGCCCAGTAGCTCTTCTTGACTAGAGAACAGTTTTGTTAACCAGGAGGGAACCCATGAATAGGTTTTTACGTTGCAATCTCCATGTTTTAATCAGTTCTATTTCTTCACAGTATAACAGACGTACAGTTTGGGCGCCGAGCATTGGAGAAACGTGTTGTTTCACAAGATCTGGAACTCTGGCTTTCCAGTGTATGATCCAAAATGTCTCCAATTTAACCAGTCGAAGCTCACAAGATAGAAACATGGACTGATGTGTTGGATCTCATTGTGCAGGTGCCAGCTAAGGACAATCAGTTCAAGCTTCTTGCTCGAGCTGGGCGACAGGTTAGTTTCTTCTTGATATAGCACTGTTTTCTTGTTATAAGGAGTTTCATTAGGCAAGGATTGATGTTTAGTCGGTTTTCAGTCCCAACTGAACAGAAAACAAAGGTACATCCTGTAAAACCAAAATATCAAACAAGTCTTCAAAATGGTTACACCGGAAGTTAGTACGACAAGTTTTGTGAAAGATTGTAATGGTTGTCTGATGAGCGTGCCGTTGGAATAATTGTTGTAGTTGTGTGACAGAGTGTAAGTAAAAAATTATAATCCTTTAAACTGGCAGGTCCAAGAACTATATTTGACAACCAGCCTAGACCAGGAGGGCATAAAGAAGGCGGTACAGAGAGTACTAGGACGTGTTCCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009456