Os07g0424400

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Revision as of 08:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0424400| Description = Similar to Cellulose synthase-7| Version = NM_001066022.1 GI:115471776 GeneID:4343049| Length = 5653 bp| Definition...")
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Gene Name

Os07g0424400

Description

Similar to Cellulose synthase-7

Version

NM_001066022.1 GI:115471776 GeneID:4343049

Length

5653 bp

Definition

Oryza sativa Japonica Group Os07g0424400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:14401711..14407363

Sequence Coding Region

14402299..14402883,14402970..14403320,14403402..14403598,14403691..14403982,14404069..14404281
,14404386..14404511,14404628..14404765,14404846..14405191,14405269..14405535
,14405885..14406059,14406142..14406244,14406336..14406546,14406654..14406850
,14406948..14407028

Expression

GEO Profiles:Os07g0424400

Genome Context

<gbrowseImage1> name=NC_008400:14401711..14407363 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:14401711..14407363 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggcgagcgccggtctggtcgccggctcccacaaccgcaacgagctcgtcgtcatccgccgcgacggcgatcccgggccgaagccgctccggcagcagaacgggcaggtgtgccagatttgcggcgacgacgtggggctcaaccccgacggcgagccgttcgtggcgtgcaacgagtgcgccttcccggtgtgccgcgactgctacgagtacgagcgccgcgagggcacgcagaactgcccccagtgcaagacccgcttcaagcgcctcaggggttgcgctcgtgtgcccggggacgaggaggaggacggtgtggatgacctggagaacgagttcaactggagggacaggaatgactcgcagtacgtcgcggagtcgatgctccacgcccatatgagctatggccgtggtggggtcgacgtcaacggtgttccgcagccattccagcccaaccccaatgttcccctccttaccgatgggcagatggttgatgacatcccgccggagcagcatgcgcttgtgccatcttttatgggcggcgggggaaagaggatccacccgcttccttatgcggatcccaatctacctgttcaaccaagatctatggacccatccaaggatcttgctgcatacggttatggtagtgttgcgtggaaggagaggatggagagctggaagcagaagcaggagaggctgcaccagatgagaaatgatggtggtggtaaagactgggatggcgatggtgatgatggagatctaccactaatggatgaagctaggcagccattgtccagaaaagtcccaattccttcaagtcagattaacccctatagaatggttatcataattcggctggtggttttggggtttttcttccactatcgagtgatgcatccagtgcctgatgcttttgccttatggctgatatctgtaatttgtgaaatctggtttgccatgtcttggattcttgatcaattccccaagtggtttcctatcgagagagagacttaccttgatcgattgacattgaggtttgacaaggaaggccaaacatctcaacttgcaccaatcgatttctttgtcagtactgttgatcccttgaaggaacctcctttggtcacagcaaacactgttctatctatcctcgcggtagattatccagttgataaggtttcatgctatgtctctgatgatggtgctgcaatgctgacatttgaagcattatccgaaacatctgaatttgcaaagaaatgggttcctttctgcaaaaagtacagtattgaaccacgtgctccagagtggtacttccaacagaagatagactacctgaaggataaggtggcaccatactttgttagggagaggagagcaatgaagagagagtatgaggaattcaaggtgagaatcaatgcattggttgctaaagctcagaaagttcccgaggaaggttggacaatgcaagatggaactccctggcctggaaacaatgttcgcgatcaccctggaatgattcaggtcttccttggccaaagtggcggccatgacatcgaaggtaatgagctacctcgattggtgtatgtttcaagagaaaaaaggccaggctataaccatcacaagaaggctggtgccatgaacgcattggtccgagtatctgctgtactaactaatgctccatacatgctcaacttggattgtgatcattacatcaacaatagcaaggctataaaggaagcaatgtgttttatgatggaccctttggttggaaagaaggtttgttatgtgcaattccctcaaaggtttgatgggattgatcgtcatgatcgatacgccaacaggaacgtggtcttcttcgatatcaacatgaaaggcttggatggtatccaaggccccatctatgttggtactggatgtgtctttagaaggcaggcattgtatggttatgatgcccccaaaacgaagaagcctccgtcgaggacctgcaactgctggcctaaatggtgcatttgctgttgctgctttggtgacaggaagagcaagaagaaaactacgaaacctaaaacagagaagaagaaaagatctttcttcaagagagcagaaaatcaatcccctgcatatgcacttggtgaaattgaggagggtgctccaggagctgaaaatgaaaaggctggtattgtaaatcaacagaagctggaaaagaaatttggccaatcttctgtttttgtcgcatccacacttcttgagaatggtggaaccttgaaaagtgcgagtccagcatctcttctaaaggaagcaattcatgtcataagctgtgggtacgaagataagacagactgggggaaagagattggctggatctacggatcagttacagaagatattctaactggttttaagatgcactgccatggttggcggtcaatttactgcatacctaaactacctgcattcaaaggttctgcaccactcaatctttctgatcgtcttcaccaagttcttcggtgggctcttgggtctgttgaaatattcttcagcaaccattgccctctttggtatggatatggtggtggactaaaatgtttggaaagattttcctacattaattccatcgtgtatccttttacatccattccactcttggcttactgtacattgccagccatctgtttgctaactgggaagtttatcactccagagcttacgaatgttgccagtctctggttcatgtcactttttatctgcatttttgctactggcatcctggaaatgagatggagtggtgttggcattgatgattggtggagaaatgaacaattttgggtcattggaggggtctcttcgcacctctttgctttgttccagggacttttgaaggtcatagctggtatagatacgagtttcactgtgacatcaaaaggtggggacgatgaagagttctcagagctatatacattcaaatggactaccttgctgatacctccaaccactctactcttattgaacttcattggggttgttgctggtgtttcgaatgcaatcaataacgggtatgaatcatggggacccctcttcgggaagctcttctttgcattttgggtgatcgtccatctttacccattcctcaaaggtttggttggaaggcaaaacaggacgccaacaattgttattgtctggtccattcttctggcttcaatcttctcactcctctgggtccggattgatcctttcttagcaaagaatgatggtccacttctggaagagtgtggtttggattgcaactag</cdnaseq>

Protein Sequence

<aaseq>MEASAGLVAGSHNRNELVVIRRDGDPGPKPLRQQNGQVCQICGD DVGLNPDGEPFVACNECAFPVCRDCYEYERREGTQNCPQCKTRFKRLRGCARVPGDEE EDGVDDLENEFNWRDRNDSQYVAESMLHAHMSYGRGGVDVNGVPQPFQPNPNVPLLTD GQMVDDIPPEQHALVPSFMGGGGKRIHPLPYADPNLPVQPRSMDPSKDLAAYGYGSVA WKERMESWKQKQERLHQMRNDGGGKDWDGDGDDGDLPLMDEARQPLSRKVPIPSSQIN PYRMVIIIRLVVLGFFFHYRVMHPVPDAFALWLISVICEIWFAMSWILDQFPKWFPIE RETYLDRLTLRFDKEGQTSQLAPIDFFVSTVDPLKEPPLVTANTVLSILAVDYPVDKV SCYVSDDGAAMLTFEALSETSEFAKKWVPFCKKYSIEPRAPEWYFQQKIDYLKDKVAP YFVRERRAMKREYEEFKVRINALVAKAQKVPEEGWTMQDGTPWPGNNVRDHPGMIQVF LGQSGGHDIEGNELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPYMLNLDC DHYINNSKAIKEAMCFMMDPLVGKKVCYVQFPQRFDGIDRHDRYANRNVVFFDINMKG LDGIQGPIYVGTGCVFRRQALYGYDAPKTKKPPSRTCNCWPKWCICCCCFGDRKSKKK TTKPKTEKKKRSFFKRAENQSPAYALGEIEEGAPGAENEKAGIVNQQKLEKKFGQSSV FVASTLLENGGTLKSASPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGF KMHCHGWRSIYCIPKLPAFKGSAPLNLSDRLHQVLRWALGSVEIFFSNHCPLWYGYGG GLKCLERFSYINSIVYPFTSIPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLFIC IFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVIAGIDTSFTVTSK GGDDEEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFA FWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKNDGPLLEEC GLDCN</aaseq>

Gene Sequence

<dnaseqindica>4481..5065#4044..4394#3766..3962#3382..3673#3083..3295#2853..2978#2599..2736#2173..2518#1829..2095#1305..1479#1120..1222#818..1028#514..710#336..416#accgacactcccccgtctcttcctctcccccatttttttctttaaaattccatcactaatcctcgccacctcccccctcaccgacgctgccgccgcgcacacgcatccccggcccggcctctctctctctctctctctctctcccgctcttcctctgctccgtcgcgggggaggcgcatttgccagggcgcggaatccccgggagattcggagggagagagagagatggagatctggttgtagggcgaggagcggtcggcgggcggcgtaggaggaagagggcgagggtgagggtgtgcgtggttgattagcgggggggaggaggaggaggggcgatggaggcgagcgccggtctggtcgccggctcccacaaccgcaacgagctcgtcgtcatccgccgcgacggcgatcccggggtacgtgtgagcggtgccgctgattttttcttctttttttttttaattttttttgggtctgatttcgtttttttttttgttcgtggccgccgcgcagccgaagccgctccggcagcagaacgggcaggtgtgccagatttgcggcgacgacgtggggctcaaccccgacggcgagccgttcgtggcgtgcaacgagtgcgccttcccggtgtgccgcgactgctacgagtacgagcgccgcgagggcacgcagaactgcccccagtgcaagacccgcttcaagcgcctcaggggcaagtcacacccgcaatgccgaattggtggcaatttgccccccccctcccccccccgcctagttcccccaattgctcactcgattcgcccctgatcgatattgcaggttgcgctcgtgtgcccggggacgaggaggaggacggtgtggatgacctggagaacgagttcaactggagggacaggaatgactcgcagtacgtcgcggagtcgatgctccacgcccatatgagctatggccgtggtggggtcgacgtcaacggtgttccgcagccattccagcccaaccccaatgttcccctccttaccgatgggcagatggtactgtcaaaaattttgcgcagcggaatagcctgctactcttggctcttcgtagccgagtactcaattggttgtttcaatgtgctttcaggttgatgacatcccgccggagcagcatgcgcttgtgccatcttttatgggcggcgggggaaagaggatccacccgcttccttatgcggatcccaatctacctggtgcgcacttgagttatgatcagctatttttttacttgtgatgttttatgaatagaatcagctaaaggtagttgtgctacagttcaaccaagatctatggacccatccaaggatcttgctgcatacggttatggtagtgttgcgtggaaggagaggatggagagctggaagcagaagcaggagaggctgcaccagatgagaaatgatggtggtggtaaagactgggatggcgatggtgatgatggagatctaccactgtatgactttggaaacttttttggcttctctctgatattctatttcattccatatgttaagtcaaactcgagtgctccattctagtgataggatatactatctacagataatataagtaagacaaaataatatgtattgataaaactgtccaattcatacataggattttctcccctgtagaattgctttatcactttggctggacaaagtatgtgattgcatgaatgccaattttttaaatattttctaagaataaccgaaatgtattcgtttatttgtattttttagttcaagaatttttcgtttggtactgatccgaattaccaattgttaactgatttttaccagaatggatgaagctaggcagccattgtccagaaaagtcccaattccttcaagtcagattaacccctatagaatggttatcataattcggctggtggttttggggtttttcttccactatcgagtgatgcatccagtgcctgatgcttttgccttatggctgatatctgtaatttgtgaaatctggtttgccatgtcttggattcttgatcaattccccaagtggtttcctatcgagagagagacttaccttgatcgattgacattgaggttggttactgttactagctaggtatacttgttatccatcattctgaattaccaagactaattgtttgcttttataggtttgacaaggaaggccaaacatctcaacttgcaccaatcgatttctttgtcagtactgttgatcccttgaaggaacctcctttggtcacagcaaacactgttctatctatcctcgcggtagattatccagttgataaggtttcatgctatgtctctgatgatggtgctgcaatgctgacatttgaagcattatccgaaacatctgaatttgcaaagaaatgggttcctttctgcaaaaagtacagtattgaaccacgtgctccagagtggtacttccaacagaagatagactacctgaaggataaggtggcaccatactttgttagggagaggagagcaatgaaggtgaataattgggtcttaaaaaaattgctatttgttttgattttatagtaacattaattaggccaagcttgtcttttcagagagagtatgaggaattcaaggtgagaatcaatgcattggttgctaaagctcagaaagttcccgaggaaggttggacaatgcaagatggaactccctggcctggaaacaatgttcgcgatcaccctggaatgattcaggtatgttcgggtgatttgtgatggtgcacagtatatatgctggcattttgatggatcccctctttcctattcttgaattatgatgataaagaagttaaaactttctcaatgaataggtcttccttggccaaagtggcggccatgacatcgaaggtaatgagctacctcgattggtgtatgtttcaagagaaaaaaggccaggctataaccatcacaagaaggctggtgccatgaacgcattggtaaaagataatttctttgatgtttttttggctttccataacctgtactcctgtattaacaaaatatagtgtatgtttaatttttttgctttgttgattcacaggtccgagtatctgctgtactaactaatgctccatacatgctcaacttggattgtgatcattacatcaacaatagcaaggctataaaggaagcaatgtgttttatgatggaccctttggttggaaagaaggtttgttatgtgcaattccctcaaaggtttgatgggattgatcgtcatgatcgatacgccaacaggaacgtggtcttcttcgatgtaagatttgccccatatttctgagatactctcctacacaagttatttaattttcttgcagtttatctaacatttgcttgttacagatcaacatgaaaggcttggatggtatccaaggccccatctatgttggtactggatgtgtctttagaaggcaggcattgtatggttatgatgcccccaaaacgaagaagcctccgtcgaggacctgcaactgctggcctaaatggtgcatttgctgttgctgctttggtgacaggaagagcaagaagaaaactacgaaacctaaaacagagaagaagaaaagatctttcttcaagagagcagaaaatcaatcccctgcatatgcacttggtgaaattgaggagggtgctccaggtacgtgaacttctgaactaaacattgtgggtggtttttcctgaaacacctttgtagtaatagcatatttaatccttcaatatttttggcaggagctgaaaatgaaaaggctggtattgtaaatcaacagaagctggaaaagaaatttggccaatcttctgtttttgtcgcatccacacttcttgagaatggtggaaccttgaaaagtgcgagtccagcatctcttctaaaggaagcaattcatgtcataagctgtgggtacgaagataagacagactgggggaaagaggtaaggactggagcctgattgctgttaactggttaattgattgaaacatttcttaactagttaattatatctttgttgcagattggctggatctacggatcagttacagaagatattctaactggttttaagatgcactgccatggttggcggtcaatttactgcatacctaaactacctgcattcaaaggttctgcaccactcaatctttctgatcgtcttcaccaagttcttcggtgggctcttgggtctgttgaaatattcttcagcaaccattgccctctttggtatggatatggtggtggactaaaatgtttggaaagattttcctacattaattccatcgtgtatccttttacatccattccactcttggcttactgtacattgccagccatctgtttgctaactgggaagtttatcactccagaggtaaatcttattcaactttcagttctgttccgtatgcagttgctgtgatttgagccttacatttcccttcctgttctgttgtgcagcttacgaatgttgccagtctctggttcatgtcactttttatctgcatttttgctactggcatcctggaaatgagatggagtggtgttggcattgatgattggtggagaaatgaacaattttgggtcattggaggggtctcttcgcacctctttgctttgttccagggacttttgaaggtcatagctggtatagatacgagtttcactgtgacatcaaaaggtggggacgatgaagagttctcagagctatatacattcaaatggactaccttgctgatacctccaaccactctactcttattgaacttcattggggttgttgctggtgtttcgaatgcaatcaataacgggtatgaatcatggggacccctcttcgggaagctcttctttgcattttgggtgatcgtccatctttacccattcctcaaaggtttggttggaaggcaaaacaggacgccaacaattgttattgtctggtccattcttctggcttcaatcttctcactcctctgggtccggattgatcctttcttagcaaagaatgatggtccacttctggaagagtgtggtttggattgcaactagggagttgggaactcccccatcggtgtgtgctgaaggaatacacacttggttctgtgtagatagaaacacgaaaggtgatgttttgcttttgtcccatggtggtagctcagcctcatatctgcaatatttgggcaaaccggaggctgcggcaaccttgtgaacttcggccaccaagtacagccaaactgcgtttgattgtccagcattatttattactgctttggtggtaaatttaattgggtgagctgaacagaaggtgttggcattgctgttcatgtacaaacttgtgtctcaataaggcaggcaggaatggatctgctatggagtagaaaggtgatgcacagtatttatgtagtgaaacgtgtgtgggtgcccattgaagggcttgttcattccttgtttctcttttttacttatctagaaccaaatggatcatttagtgttagtaatgtagtgcatccagtgttgtaaaggcgccctatttttggttggtaattgtaatcaatatatacttctgttgtcttgacattttcaaagaaaggttgtaaggatgatcgtgatcagatataatatactcgtttctttttg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0424400, RefSeq:Os07g0424400