Os07g0434200
| Gene Name |
Os07g0434200 |
|---|---|
| Description |
Reverse transcriptase, RNA-dependent DNA polymerase family protein |
| Version |
NM_001066031.1 GI:115471794 GeneID:4343065 |
| Length |
3947 bp |
| Definition |
Oryza sativa Japonica Group Os07g0434200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 7:15155415..15159361 |
| Sequence Coding Region |
15155417..15159055 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008400:15155415..15159361 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008400:15155415..15159361 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>gcagttttacgcagcgccaactctcgtgtgtctctactcgttttcagattatctacagtgtcgcgtgcgttgtgttcatccggtgttcgttctcgcccgctcgctgattcgttgggatttcctgacaagatcgggaggaggagcagcaggggcgggcaagggcgcaacggcagcggaggtggcgacagcgctggcccggctcgcaagaccgacaagtgccacaactgcggcaaactcggccactgggccaaggactgcaggagcaagcccaagcaggagcaggcacatgtggtccaggaggaggatgagcccacgctcatgctcatgacgggtggctgcattgatgtggtggaggagacgggcgcgccgtgcgtgacaccggcgccgcccgcgccgcggcctcgcctagacgttgtcgagcttgtggagcagaaggtgtttgccgcgctggacgacgccaccgaccacgacaacaagcgctggatcctcgacaccggcgcgtcgaaccacatgactggctcgagggcggcgttctctgacatcgacaccaacgtcaccggcaatgtccggctaggggatggctcgctcgttcgcatcggagggcgccgcaccatcctgttcgcctgcaagaatggtgagcaccacatgcttcacaaggcctactacctcccgtgcctcgccgccaacatcatcagcgtcggccagctggacgaaaccggcttcaaggtgctggttgaagacggcgtgatgcgtgtgtgggacgagcaacaccgactgctcgcccgcataacgcgcaccccaggccggctctacgtgctcgacatcaatctcgcacggccggtctatctgatggctcgcgcgggagaggacgcttggcgctggcacgcgcgtttcgggcacgtcaacttcaccgcgctgcgcaagatgggcagagaagcactggtacgtgggttgcccgttctgtcgcaggttgagcaagtgtgcgaggcttgccttgctgggaagcagcggcgagctcctttcccgcagcaggcacttcaccgcgctaccgaacccctcgccctgctgcacggcgacctttgtgggccggtcatgccggcgacaccgagcggaaatcgctatttcccgctgttggtggatgactacagccgctatatgtggctcgtgctcctcgccaccaaggatgccgcgccggacgccatgaagcgtgttcaggcagccgccgagcgcaagagtggccgcaaactccgggcgctccggactgatcgtggaggcgagttcacggtcgggcacttcaccgagtactgcgcggagctcgggctgcgacgcgagttgacagctccatactcgccgcagcagaacggcgtcgtcgaacgccggaatcagtcggtggtgagcacggcgcgaagcatgctgaaagctaaggggctcccaggtatgttctggggggaggcagtgaatactgctgtttatctgctcaacaggtgctcgtccaagagcattgatggcaagacgccgtatgagctctggaatggagtcacgccggctgtccatcacttgcgcacatttgggtgtgtcgcacacgtgaaggtaaccgccccgacgaagaagcttgacgacaggagtcggccgatgatttttgtcggctacgagctcggctcaaaggcgtaccgtgtctacgacccggcgacgcggcgcgtccacgtctcgcgggacgtggtgttcgacgaggaggcgcagtggaattgggatggcgaggcagctaccaacgttgactccgacttcaccatcgagtacaccacggtgtaccacccagcgacggcgactccgacgcaaaccggcacggagcacgggggagctccagcctcgccgcgctcacctgcatcaggctcgactccgacaacaccgcctgtggcagaagtgtcgccggtggaatttgtctctcctccgcctgacgtggaggatgatcttgacgcggaccacgatgacgcgccactccgtttccgtcgcattgacgacgtgcttgggccggcgacgccgccgggccaggccgttcgcgagctgagcgaggagctgttcgcggtaacagcggaggagccggcgtcgttcgccgaagcagagcagctaagctgctggcgacaagcgatgatcgaggagatgcgttctattgaggcgaacaagacttggcggctcgttgatccgctagcgcgccaacgtccgattggactcaagtgggtctacaaggccaagaaggacgccgccggcaacatcaccaagtacaaagcacgcctggtcgcgaaggggtatgtgcagcggcaaggcatcgacttcgacgaggtgttcgcaccagtggcgcggctcgagtccgttcgcttgttgttggcgcatgcggcgtgcgagggctgggccgtgcatcacatggacgtcaaatcggcgtttttgaacggcgagcttctggaggaggtctacgtcgcgcagccgccgggattcgtcgtcgacggccaggaacacaaggtgttgcgccttgacaaggcgctctatgggctccgtcaggcaccgcgtgcttggtactccaagctggacgcgtcgctgctatcgcttggttttcaccgaagtgattccgagcatgccgtgtacatgcgcggcacgggggagcaacggctggtggtcggcgtgtatgtcgacgatctcatcatcactggcggcaaccccggcgagctgaaacagttcaaggaggagatgaaaggaacattccaaatgagcgacctcggcttgttgcagtactacctcggcctggaagtgaaccagacagaggacggcatcacggtgaaccagcgcgcctacgcggagaagattctgcagactgccggcatggtggccagcaatcccagccttaccccaatggagacgcgcctcaagctcagcaagatgagcaacgccccctccgtcgacgccactgattaccggtggatcgttggctccctgcgctatctggtgaactcgagaccggatttggcgtactcggtgggctacgtgagcaggtttatggagaaacccaccaccgaacacctggcggccgtgaagcgagtgctgcgctatgtcgctggctccatcggctacggctgccactacaagaggaagaaagatgcaagtttagtcggctacagcgacagcgatctcgccggtgacgtcgacactcgcaagagcacctccggcgtcttcttcttcctcggcgacaacttgatcacctggcagtcgcagaagcagaaagttgtggccttgtcgtcctgcgaggctgaatacatagcggcgacaacggcggcttgccaaggtgtgtggctggcgcgtctccttgctgaactccagggagaggaggccgacgccgtcacattgaggattgacaaccaatctgccatcatgcttagcaaaaaccctgtcttccacgatcgcagcaagcacatcgacacgagatatcactacatcagagaatgcattgaggagggcagggtgaaggtcgagttcatcggcaccaacgagcagttggcggatattctgacgaagtcactcggacgggacaggttcatggagctgcgttcccagattggcctcgtcgaagttcaaacaccgcgcaaggtttag</cdnaseq> |
| Protein Sequence |
<aaseq>AVLRSANSRVSLLVFRLSTVSRALCSSGVRSRPLADSLGFPDKI GRRSSRGGQGRNGSGGGDSAGPARKTDKCHNCGKLGHWAKDCRSKPKQEQAHVVQEED EPTLMLMTGGCIDVVEETGAPCVTPAPPAPRPRLDVVELVEQKVFAALDDATDHDNKR WILDTGASNHMTGSRAAFSDIDTNVTGNVRLGDGSLVRIGGRRTILFACKNGEHHMLH KAYYLPCLAANIISVGQLDETGFKVLVEDGVMRVWDEQHRLLARITRTPGRLYVLDIN LARPVYLMARAGEDAWRWHARFGHVNFTALRKMGREALVRGLPVLSQVEQVCEACLAG KQRRAPFPQQALHRATEPLALLHGDLCGPVMPATPSGNRYFPLLVDDYSRYMWLVLLA TKDAAPDAMKRVQAAAERKSGRKLRALRTDRGGEFTVGHFTEYCAELGLRRELTAPYS PQQNGVVERRNQSVVSTARSMLKAKGLPGMFWGEAVNTAVYLLNRCSSKSIDGKTPYE LWNGVTPAVHHLRTFGCVAHVKVTAPTKKLDDRSRPMIFVGYELGSKAYRVYDPATRR VHVSRDVVFDEEAQWNWDGEAATNVDSDFTIEYTTVYHPATATPTQTGTEHGGAPASP RSPASGSTPTTPPVAEVSPVEFVSPPPDVEDDLDADHDDAPLRFRRIDDVLGPATPPG QAVRELSEELFAVTAEEPASFAEAEQLSCWRQAMIEEMRSIEANKTWRLVDPLARQRP IGLKWVYKAKKDAAGNITKYKARLVAKGYVQRQGIDFDEVFAPVARLESVRLLLAHAA CEGWAVHHMDVKSAFLNGELLEEVYVAQPPGFVVDGQEHKVLRLDKALYGLRQAPRAW YSKLDASLLSLGFHRSDSEHAVYMRGTGEQRLVVGVYVDDLIITGGNPGELKQFKEEM KGTFQMSDLGLLQYYLGLEVNQTEDGITVNQRAYAEKILQTAGMVASNPSLTPMETRL KLSKMSNAPSVDATDYRWIVGSLRYLVNSRPDLAYSVGYVSRFMEKPTTEHLAAVKRV LRYVAGSIGYGCHYKRKKDASLVGYSDSDLAGDVDTRKSTSGVFFFLGDNLITWQSQK QKVVALSSCEAEYIAATTAACQGVWLARLLAELQGEEADAVTLRIDNQSAIMLSKNPV FHDRSKHIDTRYHYIRECIEEGRVKVEFIGTNEQLADILTKSLGRDRFMELRSQIGLV EVQTPRKV</aaseq> |
| Gene Sequence |
<dnaseqindica>3..3641#aggcagttttacgcagcgccaactctcgtgtgtctctactcgttttcagattatctacagtgtcgcgtgcgttgtgttcatccggtgttcgttctcgcccgctcgctgattcgttgggatttcctgacaagatcgggaggaggagcagcaggggcgggcaagggcgcaacggcagcggaggtggcgacagcgctggcccggctcgcaagaccgacaagtgccacaactgcggcaaactcggccactgggccaaggactgcaggagcaagcccaagcaggagcaggcacatgtggtccaggaggaggatgagcccacgctcatgctcatgacgggtggctgcattgatgtggtggaggagacgggcgcgccgtgcgtgacaccggcgccgcccgcgccgcggcctcgcctagacgttgtcgagcttgtggagcagaaggtgtttgccgcgctggacgacgccaccgaccacgacaacaagcgctggatcctcgacaccggcgcgtcgaaccacatgactggctcgagggcggcgttctctgacatcgacaccaacgtcaccggcaatgtccggctaggggatggctcgctcgttcgcatcggagggcgccgcaccatcctgttcgcctgcaagaatggtgagcaccacatgcttcacaaggcctactacctcccgtgcctcgccgccaacatcatcagcgtcggccagctggacgaaaccggcttcaaggtgctggttgaagacggcgtgatgcgtgtgtgggacgagcaacaccgactgctcgcccgcataacgcgcaccccaggccggctctacgtgctcgacatcaatctcgcacggccggtctatctgatggctcgcgcgggagaggacgcttggcgctggcacgcgcgtttcgggcacgtcaacttcaccgcgctgcgcaagatgggcagagaagcactggtacgtgggttgcccgttctgtcgcaggttgagcaagtgtgcgaggcttgccttgctgggaagcagcggcgagctcctttcccgcagcaggcacttcaccgcgctaccgaacccctcgccctgctgcacggcgacctttgtgggccggtcatgccggcgacaccgagcggaaatcgctatttcccgctgttggtggatgactacagccgctatatgtggctcgtgctcctcgccaccaaggatgccgcgccggacgccatgaagcgtgttcaggcagccgccgagcgcaagagtggccgcaaactccgggcgctccggactgatcgtggaggcgagttcacggtcgggcacttcaccgagtactgcgcggagctcgggctgcgacgcgagttgacagctccatactcgccgcagcagaacggcgtcgtcgaacgccggaatcagtcggtggtgagcacggcgcgaagcatgctgaaagctaaggggctcccaggtatgttctggggggaggcagtgaatactgctgtttatctgctcaacaggtgctcgtccaagagcattgatggcaagacgccgtatgagctctggaatggagtcacgccggctgtccatcacttgcgcacatttgggtgtgtcgcacacgtgaaggtaaccgccccgacgaagaagcttgacgacaggagtcggccgatgatttttgtcggctacgagctcggctcaaaggcgtaccgtgtctacgacccggcgacgcggcgcgtccacgtctcgcgggacgtggtgttcgacgaggaggcgcagtggaattgggatggcgaggcagctaccaacgttgactccgacttcaccatcgagtacaccacggtgtaccacccagcgacggcgactccgacgcaaaccggcacggagcacgggggagctccagcctcgccgcgctcacctgcatcaggctcgactccgacaacaccgcctgtggcagaagtgtcgccggtggaatttgtctctcctccgcctgacgtggaggatgatcttgacgcggaccacgatgacgcgccactccgtttccgtcgcattgacgacgtgcttgggccggcgacgccgccgggccaggccgttcgcgagctgagcgaggagctgttcgcggtaacagcggaggagccggcgtcgttcgccgaagcagagcagctaagctgctggcgacaagcgatgatcgaggagatgcgttctattgaggcgaacaagacttggcggctcgttgatccgctagcgcgccaacgtccgattggactcaagtgggtctacaaggccaagaaggacgccgccggcaacatcaccaagtacaaagcacgcctggtcgcgaaggggtatgtgcagcggcaaggcatcgacttcgacgaggtgttcgcaccagtggcgcggctcgagtccgttcgcttgttgttggcgcatgcggcgtgcgagggctgggccgtgcatcacatggacgtcaaatcggcgtttttgaacggcgagcttctggaggaggtctacgtcgcgcagccgccgggattcgtcgtcgacggccaggaacacaaggtgttgcgccttgacaaggcgctctatgggctccgtcaggcaccgcgtgcttggtactccaagctggacgcgtcgctgctatcgcttggttttcaccgaagtgattccgagcatgccgtgtacatgcgcggcacgggggagcaacggctggtggtcggcgtgtatgtcgacgatctcatcatcactggcggcaaccccggcgagctgaaacagttcaaggaggagatgaaaggaacattccaaatgagcgacctcggcttgttgcagtactacctcggcctggaagtgaaccagacagaggacggcatcacggtgaaccagcgcgcctacgcggagaagattctgcagactgccggcatggtggccagcaatcccagccttaccccaatggagacgcgcctcaagctcagcaagatgagcaacgccccctccgtcgacgccactgattaccggtggatcgttggctccctgcgctatctggtgaactcgagaccggatttggcgtactcggtgggctacgtgagcaggtttatggagaaacccaccaccgaacacctggcggccgtgaagcgagtgctgcgctatgtcgctggctccatcggctacggctgccactacaagaggaagaaagatgcaagtttagtcggctacagcgacagcgatctcgccggtgacgtcgacactcgcaagagcacctccggcgtcttcttcttcctcggcgacaacttgatcacctggcagtcgcagaagcagaaagttgtggccttgtcgtcctgcgaggctgaatacatagcggcgacaacggcggcttgccaaggtgtgtggctggcgcgtctccttgctgaactccagggagaggaggccgacgccgtcacattgaggattgacaaccaatctgccatcatgcttagcaaaaaccctgtcttccacgatcgcagcaagcacatcgacacgagatatcactacatcagagaatgcattgaggagggcagggtgaaggtcgagttcatcggcaccaacgagcagttggcggatattctgacgaagtcactcggacgggacaggttcatggagctgcgttcccagattggcctcgtcgaagttcaaacaccgcgcaaggtttagggggagatttgttagatataaaccttgtgcattttatgctttgcatttttctcgtttttctgttgcattgcatgcgagtgagctccggtttgtggacgccgcgcgcgtaggggtcatggtgctggaatagccgcgcgtggccgagatcagcgggggcatgcgcacgtcgcgaactcgtggggatggacgcgagcgatccgcggcgtgggccggttccagagctagatttttcctttgttgcatcttcgttttgctataaataaggagaagaaaacagaaaagctgcaggcagttttacgcagcgcc</dnaseqindica> |
| External Link(s) |
