Os07g0435100

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Revision as of 08:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0435100| Description = Similar to 26S proteasome subunit RPN12| Version = NM_001066035.1 GI:115471802 GeneID:4343069| Length = 3073 bp| De...")
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Gene Name

Os07g0435100

Description

Similar to 26S proteasome subunit RPN12

Version

NM_001066035.1 GI:115471802 GeneID:4343069

Length

3073 bp

Definition

Oryza sativa Japonica Group Os07g0435100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:15187608..15190680

Sequence Coding Region

15187943..15188083,15188166..15188277,15188386..15188649,15189098..15189200,15189937..15190015
,15190485..15190589

Expression

GEO Profiles:Os07g0435100

Genome Context

<gbrowseImage1> name=NC_008400:15187608..15190680 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:15187608..15190680 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatccgaagctggtggaggtgacgcagctcttctcccgcttcaaggcagccttcgccaggaacgacttcgacacctgcgtagacctgctgtcgcagctcaaggtccgcctcaccaagttccccagccttcctccatcatttcagcagacaccgaatgcagtggaagagctgaaaattgcgagggacatctatgagcatgcagttgttctgagtgtgaaaattgaagaccaagatgcatttgaaagggacttttgtcaactcaaaccttattacatggatacatgcggcataattccaccatcaccacaggagtatccaatcttgggtcttaatcttctaaggctgttagttcagaacagaattgcagagttccacactgagctggaacttctgccggtcacagcacttgaaaatccttgcatcaagcatgcggtggagcttgagcagtcatttatggagggtgcttacaaccgagtgttgagcgctcgccaggctgtgccccacgaaacatatgtgtacttcatggatcttcttgccaaaacagtcagagatgaactggctggttgcagtgagaagggttatgattatatgtcaatagctgaagcaagacaagtgctgatgttcagctctgacaaagaattgcaccagtacatcgcagaggagcaccctgaatgggaggtaaaggatggttccgtcttcttccagaaggcgaaggagacccagccctgcaaggagataccatctttgcaggttatcaaccaaacgctcagctatgctagagagctggagcggattgtatga</cdnaseq>

Protein Sequence

<aaseq>MDPKLVEVTQLFSRFKAAFARNDFDTCVDLLSQLKVRLTKFPSL PPSFQQTPNAVEELKIARDIYEHAVVLSVKIEDQDAFERDFCQLKPYYMDTCGIIPPS PQEYPILGLNLLRLLVQNRIAEFHTELELLPVTALENPCIKHAVELEQSFMEGAYNRV LSARQAVPHETYVYFMDLLAKTVRDELAGCSEKGYDYMSIAEARQVLMFSSDKELHQY IAEEHPEWEVKDGSVFFQKAKETQPCKEIPSLQVINQTLSYARELERIV</aaseq>

Gene Sequence

<dnaseqindica>2598..2738#2404..2515#2032..2295#1481..1583#666..744#92..196#ttctctctccctagcacgcaaccgagtcgagactagacaaggggagcagccgccgcgatccaagtcctcctccgccgccgccgacgccgccatggatccgaagctggtggaggtgacgcagctcttctcccgcttcaaggcagccttcgccaggaacgacttcgacacctgcgtagacctgctgtcgcagctcaaggtcgatcccccgtggatctcgtccgctcctgctgcgttgaaatattcgattctttttatcgctatttcgtccaagtttgttcttgtttcgtcggtgtagggattgatctgctgtcacgatgggatgtgtgtgtgtgtgtgtttttttttttgcataggttcgattgcttctggattcgattctagctagggtttcttgcccgggaaggcggatctattcctagtttacaaacgaattcgacggatttctttagatccgagtttgtagtaaacacatgacctcctcgtctggcctcagttagggtttttaatttttaatttttatttttatttactgtggagaataaagaaatactgggattttactaggttttagattattatcgaagtccaattctgatttggcactacagggaggtgtaaattttgtgaatttcatgtgttgacatgtggtacccctccttgtgcaggtccgcctcaccaagttccccagccttcctccatcatttcagcagacaccgaatgcagtggaagagctgaaaattgcgagtaagattaattggatgtttgcttttatattaatttctgcctaaaatgtgctacacttgttacatttgattgattctgtacatggttagttactcttgaacttctcatttgcacacaattatagatcagtgtatttcattgttaaacttacatctgaatatctgatgctgaaatttggtggctgtatttcattagcatgttttccacatgctttttgtggtcaatatctttcctatcttgattcctcttaggaaattgtgtatgcttatgttttatcgactcatgattatgatctagctattcagcaatagacatttgaggaagtattttagccagttaatttttatgtaacattgcagttatccatgacagaacacatctctatctctatctcttatcttctctactatattataaaaattgaagatgtttttgccagtactttggtatgccatttgtgtatgagtcggttttcaagttcgttcacttttggaaatacatatcagtatttgagtcgtttattaagttcgtttgcttttggaaatacagaggagtcgtataagatatctctttaaaagaactcgcatgctaacttgaggtgatcggactctaattgcaactcatgattttaagcgaattcccacagtgaatttcactttaattaaactgtataacaataataagattaaaatagccttcacctgtctagtactaagataaatgtgtaatctttcaggggacatctatgagcatgcagttgttctgagtgtgaaaattgaagaccaagatgcatttgaaagggacttttgtcaactcaaaccttattacatggatacatggttagttcctgtctacacttcacatcagttctgttaccgtatattcaattgtaggctgtcattttgatgcacgtaattttcttttatctaccattagtttttagaaactaaaaataagaagtaatcaaggataatttgttttcctttggcacgagttgcgactgatttgagcctgtactggtcaagtttaggctaccgtgggttatattaccgctaaagtgtagtatgttggtttttttatgaaatatcttttgattgagcaagtattaatctatattatgtaccagcatggtgaacattttgtatgcctctaaaacgtggtcatatctaactttggatgtaaaatttgatgaacacttgcatgataaataattcaagggcttgttgtaatggttgttttatgtttttttttctgtcatgtgattctaaatcattctgttttatgaagcggcataattccaccatcaccacaggagtatccaatcttgggtcttaatcttctaaggctgttagttcagaacagaattgcagagttccacactgagctggaacttctgccggtcacagcacttgaaaatccttgcatcaagcatgcggtggagcttgagcagtcatttatggagggtgcttacaaccgagtgttgagcgctcgccaggctgtgccccacgaaacatatgtgtacttcatggatcttcttgccaaaacagtcaggtcagtataattatattactgtattactggtgcttctcatttgatgtattgatttaaaatttgtgcagcccataatcccttatttgaatgcttgttctgcacatgcagagatgaactggctggttgcagtgagaagggttatgattatatgtcaatagctgaagcaagacaagtgctgatgttcagctctgacaaagaattgcaccagtacatcgcagaggtaattgctcttcctcccctctatttatgtgcctctcgtcaatttacatgatataaaccctgtatttaatgtggtgttacaggagcaccctgaatgggaggtaaaggatggttccgtcttcttccagaaggcgaaggagacccagccctgcaaggagataccatctttgcaggttatcaaccaaacgctcagctatgctagagagctggagcggattgtatgatttgttaatgaatatcatttgagatcatttgggacggcatgttcatgctatgtacacatcaggtgtcacggttgagatgcgcatgttgcagctttgaacgtttgagatgcccatgttaccttatgatactttttttaaaaatttcatttaatgggctggatctgtgtctgatgtttggctgcccagtaactctgatcgtgttttgatatgtcagttcgtgatcaatttactttgctgaatagctgtcctgaaaatgttcagtattagtcgtgaattgcaactgcaaactgttgggcttatgatgatgaaatgagatcgtacttattttgatgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0435100, RefSeq:Os07g0435100