Os07g0439100

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Revision as of 08:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0439100| Description = KH, type 1 domain containing protein| Version = NM_001066053.1 GI:115471838 GeneID:4343089| Length = 4406 bp| Defin...")
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Gene Name

Os07g0439100

Description

KH, type 1 domain containing protein

Version

NM_001066053.1 GI:115471838 GeneID:4343089

Length

4406 bp

Definition

Oryza sativa Japonica Group Os07g0439100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:15434781..15439186

Sequence Coding Region

15435106..15435240,15436279..15436366,15437317..15437489,15438422..15438493,15438563..15438709
,15439019..15439105

Expression

GEO Profiles:Os07g0439100

Genome Context

<gbrowseImage1> name=NC_008400:15434781..15439186 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:15434781..15439186 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaataacacaacaagaacaaaaatgaaaattttagaagagactgctgttccagcttgtgcctcacaatacgaactagttctgcagatcactggagagccaatgaatgttagagacgctttatctcttgtttgtgagaaactacgtaatcattgcttctcttctgagaaaacaacctacggcaatggtcatgttccctcatcggctattgatgaattaactacaagcagccagaatgaaattgactcggtacaaaactctatcagcgccttcgacttgggatgtttgggctccccacaaattcagaaacctaccattgggtgtggcactgagatcaacaacccaattaatgaggtggagaaaccagctaatggaaatggcactggaattaacaatttgaatactgggatgcagaatgaaaatggaattgacgtttcaaatcatggagctacatctctggaggaaaaaaaacttttgagaggaatcaagactgccaccataactaggatcacatatgaggttgctgtttgcggagataatggaaacgacttcactatgattagagagatgtctggtgcagacgttactgcccactacccgcttccagagacgagtgacggtatgatcgtgatatctggaacgccagatgaggcgcaatcggctctggccatgttccttgaccttgtcaaagaggggcagtga</cdnaseq>

Protein Sequence

<aaseq>MNNTTRTKMKILEETAVPACASQYELVLQITGEPMNVRDALSLV CEKLRNHCFSSEKTTYGNGHVPSSAIDELTTSSQNEIDSVQNSISAFDLGCLGSPQIQ KPTIGCGTEINNPINEVEKPANGNGTGINNLNTGMQNENGIDVSNHGATSLEEKKLLR GIKTATITRITYEVAVCGDNGNDFTMIREMSGADVTAHYPLPETSDGMIVISGTPDEA QSALAMFLDLVKEGQ</aaseq>

Gene Sequence

<dnaseqindica>3947..4081#2821..2908#1698..1870#694..765#478..624#82..168#ttgcattgctctgccagggttctaattctgaaaggccaatttggttatttagttggtccaggtggttcactaatcaagcatatgaataacacaacaagaacaaaaatgaaaattttagaagagactgctgttccagcttgtgcctcacaatacgaactagttctgcaggcaagcacttttctggtataatacaaaacagtttttgttgtacttgtttctgctttcatgctaagtagagatgtgagaagacggtgacagtatttagggttaacctgatgcatctaatcttaaccatctgatcctcttaatttttgttcaaagagtactcaatgcatagaggcatagactcagtagttcgcttcaatttttcacttctacttctcttaattcatgatcggttgatttctgatccttacactcttactatgttttgacagctcaatacttatttagtttggtattttcttttctctacagatcactggagagccaatgaatgttagagacgctttatctcttgtttgtgagaaactacgtaatcattgcttctcttctgagaaaacaacctacggcaatggtcatgttccctcatcggctattgatgaattaactacaagcagccaggttaatatctcttcaactggtcaatattcagctggcaatttgtcaagggttgatcacaggctttctcagaatgaaattgactcggtacaaaactctatcagcgccttcgacttgggatgtttgggctccccacaaattcaggttatgtattacataccttttccttgttatacatgctaaagtttctcttccttcctggatttgtgtacgatacatgcatattatgttctaaatgtttaaagagcaaaactaaatcagatgttgtacaagaaagttacatattactaacctatcaaaaactaatttgatattatgcatttggtaaagttgcaaggatcattgtagtggtctggaatgcctgtgtgaagtgtttctacttctgttgaattcttatattatcaaatttacataatttctatcttttgctgctgtgactgtgagcaacataagttgcagtaaagagatccctggctgtgttcttttggctgtgttgggaacaaatctcctgtgcacggaaaacaaagtgatccattagcgtgtgattaattaattatctattattttttttgaaaatggatcaatatgattttttaaagcaactaccgtacagaaaagttttgcaaaaaaacacaccatttagcagtttgaaaagcgcgtgcgcggaaaacgagagaggtgagttgggaaagttggggaaagaactcagccaaaactggatatttaagatatctgtcatttttttactgcaagtgcaaaccaagtcctagcctaggtgctaatcaaacttatcctctgctaatgttttgctcattataaaactgtcatatatttgagtcattcttttatagaggacgagtgtttggaaattttagtttcactcagagctcactgctaaatagatcgcatagagcactcatgcaaatatttgcaaagtgactagtaccttttattgctgaataggacacaatgaaatatttttgtccaattatgtatcctcctgtcactttgcagcctattataaattttgatgcacggtttttctgtggaagtactaaacaaatatttggatgcagaaacctaccattgggtgtggcactgagatcaacaacccaattaatgaggtggagaaaccagctaatggaaatggcactggaattaacaatttgaatactgggatgcagaatgaaaatggaattgacgtttcaaatcatggagctacatctctggaggaaaaaaaacttttgaggtaatagtcatatttgtttgtaacccatttctacccttgtccctttagaagtggtcattgcgtaagattattttataacagatcctgtctatggcacttcaatttttttcttgtatgtcaaatcacaaaaaccaatatcgtcttgggttcttattccattttagcataattgtcagctatttagtatcatagatctttctatttagagcccaagacgctactagcaccctgccatttacgtgagggatgcactttactgcttagaatgttgtatgtacagtcacaggaatgcatttagggttgctggatgcatgtactacttcatgggtaatgtgtttacagtctcaagcgcaggcctggattatcagcaaactcactgtttatccagaaattaatgcttagagcagcaccaaactgttgtattcaaatttggtcttatattaatagtttgtactattttattatgtcttgttcttcaagtcctgtacaggaaacatcccatggcaaacttcaaacagaatatctattttggtccaatggaaaacaatgaatagcaacaagtattgctgtgcacgattaatcttctgtgctctagcacccttgtagttgtgattgaactttagcaattcaatgtattatatatgcgtcacacaagtggttccaccagttatgtgcctaatactatatatttttataatattttgttcttgatgaagtaatgaatttgcaattggtactgtacatgttttgaatatagcatgcatgtcttagttaataactagaagggatcaacaaagggcaaataacatcagctgtataaacttccattcctatatgtcacattcctttggttattttacataatggtttgtgcatttattgatgctatgctttagtgacctgtaaatggcactaactacaattacaatgatttctgcttctggccacagaggaatcaagactgccaccataactaggatcacatatgaggttgctgtttgcggagataatggaaacgacttcactatgattagagaggtattaacggagaattatgtgatcgtgtatgcttattttgattgcctttgagaatttacttcaaataaatgctggtgtttctgagttttatttttttaaaaaaaattgattaaatgcttcctggattgggaaaaagaaactggttaagtcattacgttttgaactcagaactgaccttgctgatcatgtgtgttttcaaaatgctgtactggtctggtttagtaaagacacctagttcttcattctagaccatttaaatggtgtgcagctttaggtgttccttgatttggaaaatctgaagaaatttacatttccagcctctacatctatgatgcattgatgcatatgatgtacgtagccattaagtttgagattaaacaagggacagaacctcccaagagattaaataagcaaaacacgagattaaatttacactgttagggcctgtttgatatggatgaaaggcgctctaccatgatgattaaatattgtatattataaacctaacaaatactagcttaaaacaagtggtgtaaacaatgctgatgtagaaagtttttggagatatcatacttttggaagcataccacgaataattgcaaccattaatctaagcatgaagcctgttactagcttgttgtccaaagagggtgaataagcccctagaggatgacgatagactgttgtccaaagagggtgaataagcccctagaggatgacgatagactctaagagtgtggctgcgataagcataatatttttgttctctttgatactgcctcgaacaccatacacagagctagctgatattactaggaaagtatttacttcaattatcctttgtgtttttgccagttctatttttctgtgtttctatcccaactctttcattatatgtccgcgcaatcttttttctttttggaccagtaagttcaaaatttattgattgccttcgaagttacattgctgattttctactctgattggtattgaactttatggagctaatctaccattttttattttgtgaatactcagatgtctggtgcagacgttactgcccactacccgcttccagagacgagtgacggtatgatcgtgatatctggaacgccagatgaggcgcaatcggctctggccatgttccttgaccttgtcaaagaggggcagtgatcatcatcagatcttcatgcattagccctgattctgctaacatagatcactgttgggatggatctgctaacattttgctgacaccacgagatgttcttgaggttaactgacaacattttatgtgtaactatgtccagtaacgacaccacgagactagggttcatcacgggacaccacgaggcagacgcattcctctgtttgctgaatgtagcagcagagcaggcgcgtgatttatttatgtttctttttctttttacttaatccttttgtgctcttgctgctgggggaggccttaattgagatggatatctgcctatttttttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0439100, RefSeq:Os07g0439100