Os09g0128400

From RiceWiki
Revision as of 07:17, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0128400| Description = Conserved hypothetical protein| Version = NM_001069148.1 GI:115478035 GeneID:4346441| Length = 5876 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0128400

Description

Conserved hypothetical protein

Version

NM_001069148.1 GI:115478035 GeneID:4346441

Length

5876 bp

Definition

Oryza sativa Japonica Group Os09g0128400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:2128290..2134165

Sequence Coding Region

2129845..2129860,2130148..2130254,2130475..2130648,2132028..2132270,2133905..2134030

Expression

GEO Profiles:Os09g0128400

Genome Context

<gbrowseImage1> name=NC_008402:2128290..2134165 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:2128290..2134165 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggttcatctgccgcaccaggggaagctgcggcgggatgtcaaggaggaggcgctggacgacggcgacgcggcggcacaggcagaggcgtcgccgttccacaagaggtcccgccttgctctacagcactggagcacagacggtggtagtgtgtccaatcaacagtcatcccaacatggtttccttgatgagcctagcccattgggcttgcggctgaagaagagcccctctctggtggatttgatccaaatgaagcttgtgcaggctggtaaggccaaagatgtccagcatagtggaaccgctagtgcctcagagaaattgaaggcttccaatttccctggttctgttctaagaattggatcttgggagtgggtgtcaaggtatgaaggcgatctggttgcaaaatgctattttgctaagcataaacttgtgtgggaagtactggatggtggtctgaagagcaagattgagatacagtggtctgacatctgtgccatgaaggtggtttctccagaaaatgaacctgggatcttggagatcgcattgtcccggcagccacttttctttcgagaaactaatccacagccaaggaaacacactttatggcaggcaacatctgatttcactggtggacaagcaagcattcacagtgcccgccaggaatga</cdnaseq>

Protein Sequence

<aaseq>MVHLPHQGKLRRDVKEEALDDGDAAAQAEASPFHKRSRLALQHW STDGGSVSNQQSSQHGFLDEPSPLGLRLKKSPSLVDLIQMKLVQAGKAKDVQHSGTAS ASEKLKASNFPGSVLRIGSWEWVSRYEGDLVAKCYFAKHKLVWEVLDGGLKSKIEIQW SDICAMKVVSPENEPGILEIALSRQPLFFRETNPQPRKHTLWQATSDFTGGQASIHSA RQE</aaseq>

Gene Sequence

<dnaseqindica>4306..4321#3912..4018#3518..3691#1896..2138#136..261#actctcgctctccgtacggtacaaacaaaccagaaaccaccacaactgaacaagaagagagtattttctcctctgttccttctcttttgcccttctggttgggaaacaagtaacgacgccggcggcggagagacgatggttcatctgccgcaccaggggaagctgcggcgggatgtcaaggaggaggcgctggacgacggcgacgcggcggcacaggcagaggcgtcgccgttccacaagaggtcccgccttgctctacaggtgggttcgctctccttcctgttgcttcggtgttcctctcgtttctctaggaggaaattccgcatacaggaggaatttgatttattctctctgctactatttctagtactactgttgatgagtaatttattattggagcggagtattattttgtgactcagcggccggaggggcagcttgttttgaagaaattcgtacgagcaagtgacgatcaattaacattttctcgccgtgctgttaatttattattggctcagttcgttccgaaaacaaaaatgattattagttcaaagtttgattcgcatgatacatccttttctttttttttccgtgggcaatttgtcttgttcatcatttttgctcattatattagatgataattctgaacttggtgagtccaagtgaaagggtatttgtgactttatccaatcaaactccttcgaataagattcgatttctgtacctagccaagatatttacctgtattaccaatttatccatccatagttggcttagatattgacgtgcggagtcttccaatttgggtattatgtctctcactatacaggtctccatcggcggtcacttcatactacagagtcctttttggatttggattggtagtgattaaactttactttagcttttctcctcgtgaattcaaatttaccttagattttttcctgtcaattaaaacttattactaacattaaaatgttgatctgtctaatcttctggggagcagcccacttgctggaccttttctcattttttgtgtgtgtttgtgcgaaaccagtagctgtactatttgatttcacctcagaaaaattaatgctgctttggttttaaaaagctgatctatcattttcattggttgcttttctttgcttgtaatctttttttttttttgcgtacttcacctaatattcttttagcaatgggagaaattactgttcctatatctatttgctctttattatagtttctatatctgtttgttccttttcacttgttgtcatgcaaacattctgaacaacatcgcaagataggggctatttgcatataaataggttgcatgtttccgcccaattgagaagttgcacctgatactttccctgcatgtaaatggcataaatacacaagaagatctgaagatgtgctgcttcaaatcaaatcacaaatctttcttggtgcattactggaactggtttccgttcttcctatgatattgttacttctaatcacatgcattcatcatttggatttaataattggcatgctgagcttttcacttatagagctctgttctccgttactgttactgattcctctgtccatctaacaaatgaaccaatcctttttttgtgtttagttaattgatcttacaggaatattgtaattttccctatctgagaaacacactttttccattttttgccacttagtacataaaacttgattggaaaagtaaatgttatatattagttcataacgttgtactatgaaattgtaaattagttcttatagtacaaatagttcaaatttaaaagtgagaaatgagatatactattggttaccttgctttaatgttccgcgtttaatcatatattgtgttttctcatggtgtcatgcagcactggagcacagacggtggtagtgtgtccaatcaacagtcatcccaacatggtttccttgatgagcctagcccattgggcttgcggctgaagaagagcccctctctggtggatttgatccaaatgaagcttgtgcaggctggtaaggccaaagatgtccagcatagtggaaccgctagtgcctcagagaaattgaaggcttccaatttccctggttctgttctaagaattggatcttgggaggttagtggcttttttatatgcgtccatttatgttggcatgttacatagtcttctctaattttgatacaacatgtatgatttcatttacttacaaaaaaaaaatagactgcaaattggcactcacatttgcaatacttcttgatgtatgattgctatgaagaatttgaaagcaatagttgtgaatgtgttgaatcttttagaatagagtggttttacggtccacattttctggtctaaaatttggtacctcaaggacaataaaatttctatttaaaataaaaaaagccataattattgatatgcattgtgtgaggatccaataggcagtttgtcattgccatattgtgatctgttcaatctaggtagtggaaatctctagcgattccaatatgatgttgatttattggctctttcaaaaagctactacaaagtctgagctgacagaaggagatgttttgtttggataattccagaggtatcatgtccaatagacctgctagaattggagaaaaacaataaaatggcaagaggcttctaatagcattatagcaaagtgtgataactttttcaggtgtatttcaaagaaatattactttgtaaagtctctttttttgggaggccctgtacgacgcataataacagggaaagagctaatacagaggatagggcctcccagagaaacagtacccgtacggcgcactgtagcatacagtattattcacggtgcactgttcacatgacatttggtttcctttagggaataggttaatttgctattttggtggtttggattcttatgtcttaggtttattttgtggtttgagtaggagcttatttattaagtgccaagtcatcccatctatctaaggatgagtttgtatccaattttattaagcacagatgagtgtgctttgctctctcccatgagaatattctagattgattctcccccattcagtgctctccttcacctagtggctaccgcagttcagcttcaagtcgtcgccctcacccaatgatgatcgaaagttcatcacaaaaacatctttagcttgggaaccacactcctttcttatactcatgaatgtgtcaagaaagagaactatcattttggaaattatgtcagcttgttgttgttctgcttagttgcaaggtgcatactgcatacacctatttttcatatcacacccgactctttgtattgttgacatttgggatgatcactgactcaatctctgtttcaacgattatgttaggctatgtttcttgtgtgctggtgtttagttgtaggttttgttatatagtaagtattctatattgttttgttcatctatgatgcaaattgatttgtttgtgcttcaaatgctgtgtatgaacagtgggtgtcaaggtatgaaggcgatctggttgcaaaatgctattttgctaagcataaacttgtgtgggaagtactggatggtggtctgaagagcaagattgagatacagtggtctgacatctgtgccatgaaggtggtttctccagaaaatgaacctgggatcttggagatcgcagtaagtttttacagataaaccaattattagctcaacctaccataaaccatgcctgttggcaataacatatatgagaagctagatttagccttttaccttgtgaaactgcattacaatgctaatcgttgatctaaaatttctgtgtagtttggcctttatgagtgttttttttttggcatatcattgcttctgctaattctctcttttgtgctctgttcagttgtcccggcagccacttttctttcgagaaactaatccacagccaaggaaacacactttatggcaggcaacatctgatttcactggtggacaagcaagcattcacaggtagtaaaaatgaatgacacgttggtaacatgcgtgcttaattttaaaatgtatacccctatgttcgcaaatatggtgcttatttttcccttttgtctaactagggaaattttgatagcattttggaatttaccccataatcatgaggaacaattgtgaaaaaaaaatcagacaattatcacaacgaattagtctctcacagttgtttatgctgactaatttcctaatactgccgagtggtgagttgacttttgactatcatttatgtaaggaggcattttcttcagtgcccgccaggaatgatgaataagcatgttgagaagcttgttcattgtgacccacgtctatattcactaagccagcagaacgacatcaatttggataatccgtactttgaatcaaagtcttctatatttgaagatgcagagggcataaaaggccaagattttgagcataaagatgatggcgatcagttagctccccaaagatttacagaactgttaccgcctcattctgcatcaggtaggatagatactgaagccagacagctctcaggaacaccggacaagttacttcaacatttcccttgttcaggtgaacttcaaaatccatacttgtatcttatattccattgaaatatgaaaacatccagatgtgtcaatgaaatatgaaaatcatgcctttcaaattaggctatatttctataatggtgttagctatcaatgacttcttttctcactcactggaggtcactgcttaggaccagacaagtctgttaatattcgtcaaatttaatttgtttgatctatttcacaaattgcttcgccagtatatttgctacataatattaagaatattagacttccgtatttctagtgggaataattttactaataatgtgtctttcgccattccagttagtggtactcaagtgattaaacaagatgctgcttctggtgattgtgaacggcaagaaagcatctataattggaacggtatcaaggtaccggggataaggcgctccatgtccaaaagtgagattgcaaatcacattgggaatcatatctacagacagatgtattcagggaacctacctgcagttcatcgtggggattccacgtcaagtaaagtaacattagatggaataacccgattcctcttgggcagcacccagatcatcggcgatggcgatggcgatggctcaatgggtaaactgacatttgatgagcttaccagacaactcctcaatgattcccagataaccaacgcagctgatgaaaggatgctcatgtcaagggtcaactccctctgcagcctgattcagagagattcaggttcaggccagacaaaccccagcagcagcattcatggtgacaatgagatgcaagaaaggaagccccaaccttatgcgcttccggtgtcagcagacagtggaagcaacacctcattgccgccgaggcaagaatcgtttggggatctcctgacgcacctgcctcgcatctcatcatttcctcacttcttgtgagtgatctgacggagcaactctggagttggagtgttattctattggggtacatattggcttgagaactcttgcttgtagaaatttttgccgggaaatgtcttgaccccttttcttcttacttttttttgtacataaatagataggataactgtagattgtatagtaagcttctttagttcgatagggcaaatgcatccggtacatattctcgtcgatatagtcctttctaatttatacatttcttactcttagaaaaagtatacgtttatttcagaaacagggaaatggataaactttttgccgaaaaataaaagtaatacttcctccgttcat</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0128400, RefSeq:Os09g0128400