Os07g0442000

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Revision as of 08:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0442000| Description = Cyclin-like F-box domain containing protein| Version = NM_001066059.1 GI:115471850 GeneID:4343096| Length = 4406 bp|...")
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Gene Name

Os07g0442000

Description

Cyclin-like F-box domain containing protein

Version

NM_001066059.1 GI:115471850 GeneID:4343096

Length

4406 bp

Definition

Oryza sativa Japonica Group Os07g0442000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:15576201..15580606

Sequence Coding Region

15576960..15576996,15578173..15578330,15578416..15579270,15579371..15579529,15580079..15580360

Expression

GEO Profiles:Os07g0442000

Genome Context

<gbrowseImage1> name=NC_008400:15576201..15580606 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:15576201..15580606 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgcgacggcgacgagcacggtcgcgggtggcggcttcacaggtacaaccatttcagccagaagagcacacatggatgggatctgtctagtaaacaaaaaaaggagactgacgctcaggccatgtgttgaagtagatcacagcagcaagcgggtaagatcgcgatgtgctaagtttgagtctctcccagaggacatagtgtcaaggattatttcacaactaacattgaaggaagctgttgtaatgagctcgacatcgaccaagttgagaagagcttggatttaccatcctaatctttacttggacacttcaatagtgtttggcagttctgatcgccagaagcgagtgccgagcactgagacgtttattgacacagtcaattttatcttgaggacgcacagtggtttaggagtgaacaaacttgctgttatgtttgagttgaggaaggagcatgcacatgacattgatggatgggtttcctttgctgttacatccaaggcaagggttgtcaccctcaacttttctccatatcatggatcgcatgatcgcagttacaacttcccatgtcatcttttcaacggcaaaagtggatctcaccttcaagttcttcaacttgataccgttactttgggtccaagtcctcctggcttttgtggctttgctaaccttacaatgcttactttggagaatgtgcttgtattgggcgatttgcagttcttactgaaatgccctgcccttgaatggttgactatccgaatgtgctcccagttacataatttgtatgctcctgaaccattgccgcggttgacatttttgtgtgtacaagattgtgcaattgacaagattgatgttcatgcccctaatctcaccacatttaagtatagaggtcgttttaaagttattattgcccttcgggaatgcttgaagcttaagactgcaagcattgtatcccccattgaggacaacctttactatattttcactgagcttccaaatgggttacctcatgttgagagactacacgtgaatgtttttgtcaagactcagatacctggatttactcaggccccttacaaatttatcaatttaaggcatctgaccatgaggataacctatgaaattgctaaacgctttggtagaaatgcagttctgcaactagcatatttttcggaagctgctccgtttttggtggaccttcatttggatatgctgtgtttagatttttacgagtcccgtcctgcaagagacgtgattatgaatcgccctcactacagtctcaagagagcttgcataaccggattcaatggcaatggagggcaagttgcactagtaaaatttatcctcaagaatgcagtaaaattggaggaaatggttatagatccaaaaggtagaataacgaaccaaatgatgggagagcacaaaggccgtagaatgattaaggaaaaacttgttccaaaatacaagaatggcctacttgtaattctataa</cdnaseq>

Protein Sequence

<aaseq>MDATATSTVAGGGFTGTTISARRAHMDGICLVNKKRRLTLRPCV EVDHSSKRVRSRCAKFESLPEDIVSRIISQLTLKEAVVMSSTSTKLRRAWIYHPNLYL DTSIVFGSSDRQKRVPSTETFIDTVNFILRTHSGLGVNKLAVMFELRKEHAHDIDGWV SFAVTSKARVVTLNFSPYHGSHDRSYNFPCHLFNGKSGSHLQVLQLDTVTLGPSPPGF CGFANLTMLTLENVLVLGDLQFLLKCPALEWLTIRMCSQLHNLYAPEPLPRLTFLCVQ DCAIDKIDVHAPNLTTFKYRGRFKVIIALRECLKLKTASIVSPIEDNLYYIFTELPNG LPHVERLHVNVFVKTQIPGFTQAPYKFINLRHLTMRITYEIAKRFGRNAVLQLAYFSE AAPFLVDLHLDMLCLDFYESRPARDVIMNRPHYSLKRACITGFNGNGGQVALVKFILK NAVKLEEMVIDPKGRITNQMMGEHKGRRMIKEKLVPKYKNGLLVIL</aaseq>

Gene Sequence

<dnaseqindica>760..796#1973..2130#2216..3070#3171..3329#3879..4160#agacgaggagaggcaccagacttgctctctacatggaaaaaaatccccaatccccaacttgctgtctacagaaaaaagatccccaatccattcgtcggtgatttagagcagcgatggagggagcaaacggcgaagatgtgccgaggaggacatgtcggagggcatcggggatcggcgtcgtcgagcatcgcccatgattgggcgtcggatggagcggccggcgtcgaggtcagcccacagtggagcagcggaaggtgaggacgccctgctctgccactgcagctcgggactcaggcaggcggggaaaggagaggaggacctgtcgcggcgatgcaaatagctgcgcatgcaggcggccaaaggcgacgattgagcaagcgagcgatggcgtcctcggccttggggagcagcaacagcagcgacggcgtcggcgagcagcaggtgcagtgtcctcgtcctccacgagcaacaggcagccggagcggcggcggcgtcatgtcctttgcaatcagcggacagtggcgtcggcaagcagcgtagcaggtgcggcggcctcgaccttgacgagcagttggagcagctctgtgcgggaggtggagatggagatggtgggtggatcggaggggggagccgctcctgtcggccaccagctccaccccgtcctcctctcctcattgcggcggcgacggcctcctcctccatcccctcttccggtgttgggcgcaggagtaggcggcagttggagcgggcgctgcggcgatggacgcgacggcgacgagcacggtcgcgggtggcggtgaggactgcgctcctccatccccgatttcctctttgtgatgaatgttttaagagatttttttttcttttgcaattttttccttttgttggccccggtgatttgtgatgattttgcttcattgttgttgtatttgtgattttgtgattcatgtttctctcttttccgtgcatagttcttggcttagatgaatcggattcttgattttgatttcgattcgattttgattttgttctctgttcgggcggagggcatcacccgtggatgaacgcgtaaaaagatacggatgaaaacagattgacgaacgaaaataaaataggtgacgattggaaaaataccaatcttttaattagttaagataagatatagaatagattcacggacggacgacggacgcccccatcgaccatcgtctcctcgccgcaggtacctcgccctgctttcttccccaatccccaatccttcattcattagctagttttggtatgctcgattgggtttcaagtcggcgacctagttcgatctgccaaaaacttttaattattatcattttttttcatcttccaactcgtacctgtcctgcacaaccagatttttgtgcctccttcccttcctgtgtatgattcctacattaccaaccactgggtcaagactaggttggtgcctggtgggggtgtgggagtgggcagggcaggcgcgtggtggtcttccaaacaatcccctccctcctcctcgtctcttcattatagaatatatacagtattatgatactatgatgactgacaaggaacaagaggttgaggaaaatggttttatatattcttcttgtttgggcacaaggcaatagcttttcacttagacaatcaaatccaatcttctattagtagttgggatcagtctagctagaaaactagctattcatcccttttctattcattttcctgtgattagaatgaaatacttcttttttactctctctctctctctctctcatattgtgttctggtttggttacaatcaacaaacatacaagtgtttttttcgcacatttcttcttgtttgatacccgtgtgttgctctagtgcaccattccaattattttaatgcctcttcaactgtgtctttacataagaactacactgaaaacgttgctcaaccattgcttcctgcttgtaggcttcacaggtacaaccatttcagccagaagagcacacatggatgggatctgtctagtaaacaaaaaaaggagactgacgctcaggccatgtgttgaagtagatcacagcagcaagcgggtaagatcgcgatgtgctaagtttgagtctctcccagaggtatgtaaaattttagaatgaactgttctctactgaatgcgataagggactggatgctgatgcttttgttcaaactcactaccaggacatagtgtcaaggattatttcacaactaacattgaaggaagctgttgtaatgagctcgacatcgaccaagttgagaagagcttggatttaccatcctaatctttacttggacacttcaatagtgtttggcagttctgatcgccagaagcgagtgccgagcactgagacgtttattgacacagtcaattttatcttgaggacgcacagtggtttaggagtgaacaaacttgctgttatgtttgagttgaggaaggagcatgcacatgacattgatggatgggtttcctttgctgttacatccaaggcaagggttgtcaccctcaacttttctccatatcatggatcgcatgatcgcagttacaacttcccatgtcatcttttcaacggcaaaagtggatctcaccttcaagttcttcaacttgataccgttactttgggtccaagtcctcctggcttttgtggctttgctaaccttacaatgcttactttggagaatgtgcttgtattgggcgatttgcagttcttactgaaatgccctgcccttgaatggttgactatccgaatgtgctcccagttacataatttgtatgctcctgaaccattgccgcggttgacatttttgtgtgtacaagattgtgcaattgacaagattgatgttcatgcccctaatctcaccacatttaagtatagaggtcgttttaaagttattattgcccttcgggaatgcttgaagcttaagactgcaagcattgtatcccccattgaggacaacctttactatattttcactgagcttccaaatgggttacctcatgttgagagactacacgtgaatgtttttgtcaagactcaggtttgttaatcccaatgcatgccctcaaaatcttcaatagagtgtatcttctatttttgtttcagaaatttgttttctaactttccttgtcgtctttcagatacctggatttactcaggccccttacaaatttatcaatttaaggcatctgaccatgaggataacctatgaaattgctaaacgctttggtagaaatgcagttctgcaactagcatatttttcggaagctgctccgtttttggtggaccttcatttggatgtgagttgttatgccatctgcactttcatcctgtttgtagttataaatactatgtaatctctttttttttgccctttactcctgtaatgtttccagacttgctttatattgtctacttacttttaagtattgccttgagtcaaaattttgaaaaggggggcagtccagcctgttatattaaatgatcacttaaatctggccatgagtggaatgcagccacatagttctagctattctgcaactattggcaaaatactattttggtttctccattgaaggtttctgtaacatattgacttggtcaagaacagttcatagtcttacctagcttgttgagtatcttgattgtgaaaagacttgggagcaatcttgctaggtaacctacaaaggtggattgagaaagcgattttattatttatgatgactgaaagcagcacttgctttagcttatgaggctattgcatatattttcctgattaagtgcacataggttgtcatgctattgatttttctgtaatgacagaaggtgacaaacaattttgtgtgcagatgctgtgtttagatttttacgagtcccgtcctgcaagagacgtgattatgaatcgccctcactacagtctcaagagagcttgcataaccggattcaatggcaatggagggcaagttgcactagtaaaatttatcctcaagaatgcagtaaaattggaggaaatggttatagatccaaaaggtagaataacgaaccaaatgatgggagagcacaaaggccgtagaatgattaaggaaaaacttgttccaaaatacaagaatggcctacttgtaattctataacttctcaagttatgcattctgtttttctcaatgaatttaagttatgtctgggcagtgatatatttacttgccctttaaccctttttttttttctgaagcaacgataataaatattttatgcgatggagcatttgctaagttagagtactagtagagtagtgcaaatgtactagtattgtgattgtgtttttctttttgcaatactgaagggaagggtcatcttggtctgaaatgaatttgcatttt</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0442000, RefSeq:Os07g0442000