BGIOSGA009888

From RiceWiki
Revision as of 15:31, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA009888

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009888, complete gene.

LocusTag

OsI_13360

Ensembl Transcript ID

BGIOSGA009888-TA

Ensembl Protein ID

BGIOSGA009888-PA

Length

1131

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:33779844..33780974

Sequence Coding Region

33779844..33780974

Genome Context

<gbrowseImage1> name=IndicaChromosome03:33779844..33780974 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:33779844..33780974 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACGGACGCGCCTTTACCTTCATGGGTCGTGCTCAACAGTGCCGTGCGCATTGCCCCAGGTGCTGTCGAGAACGAGCCAGAGTGGGCAATCAAATGCTCGCACAAGCAGGCCTACCCCTACGCATGGCGGGGCGTGAAGGAAGCCAGCGCCTCGATGGCGAGGGACGTCACGCTCCTCGCGCGCCCCGTGGAGCCTCCGGATCTGTCCTCCCTGTACATACGCCTACCCGCCGATGAGCTTCGCAGGCCGCGCTTCCCCATGCCCGACAGCGGCAATGGCGATGACGACGAGATCCGCGACGGCAACGTGTCGTTGTCGGAAGGACCTCTTCTGAGGGCTTCCGTCAGGGCCGCCGACGAGAAGCTCGTCATCCTCACCTCGACGCTACCAGATTGTGACCGTGCTAGCTTCTACCTCATCTACAACGCCACCAAGACGTCTCTCTCCATGATCCCCCTCCTTCCCTCCTACTGCTCACCCTCCTTCACGATGCGACCTCTCCCCATGCGTCGCCGCAGCGGTGGAGATGGCGGTGATGGGGACTACTCCTTGGCTATCATGGCGAGGACCTCGGTGCTCGATGAACAGACACGAGACCCCATCGACCGAGATGTCCTCTGCCTGTGGCCACCTCCAGCCTCCGCCAAGCCGCTGCCGCTGTCGGGACGGCGAGGCATCGAGCCATGGCGAGTGTGGGCTCTGTTGCCAGCCACTATGGAGTGGAAGAAACTCCACGAGCTGAGCATGGCGACGTTGTGGGGGTTGGAGGGCTTCAAGAACGCTGGGTTGCCAGAGAACCTACCGATTCATCCCATCCTGAGCACGCAGCAAGATGGTGTCCTGTACCTGGTCTTGCCGGCTGAGGAGAAGGTGGAGGAAGACATCGTTGTCGCCGTCGAGGAGGAGGATGCGGCGGTAACTGAACAACGGTACTTGTTCGGCCTCGACGTGTGCAACAAGAGGATCCTGTCATCGAGACATCTCCCGGACAGTGGCTATCTCTTGGGTTTCGACATGTTCAGGTGCCTCTGTCCTCATGCCGCTCCGAGCACTGATGAGAATGGGGCGCGTCCAATTCCAGCTACACGCAAGAGGAAGTTGCCAAGCAGTCCAAGCCCTCCTTGA</cdnaseq>

Protein Sequence

<aaseq>MATDAPLPSWVVLNSAVRIAPGAVENEPEWAIKCSHKQAYPYAWRGVKEASASMARDVTLLARPVEPPDLSSLYIRLPADELRRPRFPMPDSGNGDDDEIRDGNVSLSEGPLLRASVRAADEKLVILTSTLPDCDRASFYLIYNATKTSLSMIPLLPSYCSPSFTMRPLPMRRRSGGDGGDGDYSLAIMARTSVLDEQTRDPIDRDVLCLWPPPASAKPLPLSGRRGIEPWRVWALLPATMEWKKLHELSMATLWGLEGFKNAGLPENLPIHPILSTQQDGVLYLVLPAEEKVEEDIVVAVEEEDAAVTEQRYLFGLDVCNKRILSSRHLPDSGYLLGFDMFRCLCPHAAPSTDENGARPIPATRKRKLPSSPSPP</aaseq>

Gene Sequence

<dnaseqindica>1..1131#ATGGCGACGGACGCGCCTTTACCTTCATGGGTCGTGCTCAACAGTGCCGTGCGCATTGCCCCAGGTGCTGTCGAGAACGAGCCAGAGTGGGCAATCAAATGCTCGCACAAGCAGGCCTACCCCTACGCATGGCGGGGCGTGAAGGAAGCCAGCGCCTCGATGGCGAGGGACGTCACGCTCCTCGCGCGCCCCGTGGAGCCTCCGGATCTGTCCTCCCTGTACATACGCCTACCCGCCGATGAGCTTCGCAGGCCGCGCTTCCCCATGCCCGACAGCGGCAATGGCGATGACGACGAGATCCGCGACGGCAACGTGTCGTTGTCGGAAGGACCTCTTCTGAGGGCTTCCGTCAGGGCCGCCGACGAGAAGCTCGTCATCCTCACCTCGACGCTACCAGATTGTGACCGTGCTAGCTTCTACCTCATCTACAACGCCACCAAGACGTCTCTCTCCATGATCCCCCTCCTTCCCTCCTACTGCTCACCCTCCTTCACGATGCGACCTCTCCCCATGCGTCGCCGCAGCGGTGGAGATGGCGGTGATGGGGACTACTCCTTGGCTATCATGGCGAGGACCTCGGTGCTCGATGAACAGACACGAGACCCCATCGACCGAGATGTCCTCTGCCTGTGGCCACCTCCAGCCTCCGCCAAGCCGCTGCCGCTGTCGGGACGGCGAGGCATCGAGCCATGGCGAGTGTGGGCTCTGTTGCCAGCCACTATGGAGTGGAAGAAACTCCACGAGCTGAGCATGGCGACGTTGTGGGGGTTGGAGGGCTTCAAGAACGCTGGGTTGCCAGAGAACCTACCGATTCATCCCATCCTGAGCACGCAGCAAGATGGTGTCCTGTACCTGGTCTTGCCGGCTGAGGAGAAGGTGGAGGAAGACATCGTTGTCGCCGTCGAGGAGGAGGATGCGGCGGTAACTGAACAACGGTACTTGTTCGGCCTCGACGTGTGCAACAAGAGGATCCTGTCATCGAGACATCTCCCGGACAGTGGCTATCTCTTGGGTTTCGACATGTTCAGGTGCCTCTGTCCTCATGCCGCTCCGAGCACTGATGAGAATGGGGCGCGTCCAATTCCAGCTACACGCAAGAGGAAGTTGCCAAGCAGTCCAAGCCCTCCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009888