Os07g0445600

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Revision as of 08:33, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0445600| Description = Conserved hypothetical protein| Version = NM_001066068.1 GI:115471868 GeneID:4343108| Length = 7378 bp| Definition ...")
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Gene Name

Os07g0445600

Description

Conserved hypothetical protein

Version

NM_001066068.1 GI:115471868 GeneID:4343108

Length

7378 bp

Definition

Oryza sativa Japonica Group Os07g0445600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:15864252..15871629

Sequence Coding Region

15865004..15865108,15865967..15867426,15867792..15868003,15868860..15869012,15869306..15869367
,15869470..15869522,15870117..15870156,15870236..15870356,15870436..15870615
,15871070..15871128

Expression

GEO Profiles:Os07g0445600

Genome Context

<gbrowseImage1> name=NC_008400:15864252..15871629 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:15864252..15871629 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggcccgacgcgaggctggatgcggccgtgttccagctcaccccgacccggaccaggttcgatttggtggtgatagtgaatggccggaaggagaagatagcctctggcctgctaaacccgttcctggcacacctgaaggtcgcccaggatcagattgcaaagggaggatactcaattacgcttgagccgagctcaggggttggcgcgccatggtttacaagaggcaccgtggagagattcgtgcgcttcgtgagtactccggaggtgcttgagcgagtgacgacgatagaatccgagatcttgcagctcgaggacgccatctctattcagagcaacgataatcttgggctaagatctgtagaagatcatggaggaaaattgactgaaagcaacgaaggtacacgagcgaatcacagccctgatgcagataaggctattgttatataccagcctggatcacagcctacaccagcagtgcatgatgagactacaacacatgaagagaattcaaaagtccaactgctgagagtgcttgaaacccgaaaaaatgtcttaaggaaagagcaggctatggcttttgcacgtgctgtggcagctgggtttgacatcgacaatctgggttacttgattgcgtttgcagagcgctttggtgcttcacgtttgatgagggcatgttcgcagttcatcgaactgtggaagcgaaagcatgaaactggacaatggattgaagttgaaccagaagcaatgtctacacactctgaatttcctccttttaatccatcgggtattgtttttgttggagacaacatgaagcaaaacacggaaactatgtctgtttccaatggagaggcaaatggcgaggatgcttctaaagctgagcataagtctggtcaacagatggggtatcaggctgcatatcctccatgggcaatgcatcctccaccttaccatatgcaaggaatgccttactatcctgggccgtactaccctccatatcctccagtggatgaccccaggtatcactactcgggaaggaaatcatcgaggaagcactcttcagacagtaaagagtcagaagtacttgacgaaggaagtgatggtagcagttctgaaagagggagttctcatggtcacaagtcacataaaaagggtaagcgatcagggaaaaagaaacctagtgtagttgtcataaaaaatgtaaatgtaacatccaaaaagcatggctcgtcggaaagtgagtcgcagtcaagttctgaagatgggtctcaagacagtgatgacacacactacaaaaagagacatgggaagcataagagctcaggttcaaagaaaaaggagggtgcaaaaactaactttgactctggagacgactataataacaaggatgaatcatcttatgggcaagatgctgaccaagggaactggaatgcattccagagtttcctgatgagagcagaagaaaaaacaagatctaatgatgcagatatgttttctggtgaaaaagcacctccatcaaggaaaaagaacaatgtaaacactgctgatcctattcttttggctgggggagattctggtgatgtatatgaacagagaggagcaggctttgatccagtcaatgggaggagtagagctattcggctgcaatccaatgatgaactgatgatgtctggggaagggggaagatatatggatggtgaaattaaggagatagaagctggtggtggaagatacaggagagggacaagtgaggacttcatgctctatggccaggaaaggtccatggataggaggagtgctttggatcctcttgcagaggcccggtacaggaatcctaatcaggtggacaagaatggatatgccgcggctgatgagtcctttataattcctcttagatctggttcacaagataatgttgggccggaataccgagccacgattgacattgatgttgagcttcctacaaacactaagaaaacttcagatgggaaggctggaactcaactcttctatgagccggatgaattgatgccagagcgtggatctgaagatgcttcatttggatatgatccggcaatggattacgaaagcaacatgatggtcagagccgtcaaggttgaagacagtaatgacgaggatgtctcacatagtaatgatggcgatgtaaagaaaccagagaaggagaagataaggggtacaaaggatggttcggataaaagaaagaaggatgcaatactcaggaggctctctgctccaaagaccccactcaatgatgcacagaaacgtgcacagaacatgcgagcatataaagctgatctccagaaactgaagaaagagcagaccatcctgtttagggaccggggtggcacaactgaacaagttggtggatctaaacgagtgatttgcaagtttagggaccgggatgacacagtcgaacaagtttga</cdnaseq>

Protein Sequence

<aaseq>MRPDARLDAAVFQLTPTRTRFDLVVIVNGRKEKIASGLLNPFLA HLKVAQDQIAKGGYSITLEPSSGVGAPWFTRGTVERFVRFVSTPEVLERVTTIESEIL QLEDAISIQSNDNLGLRSVEDHGGKLTESNEGTRANHSPDADKAIVIYQPGSQPTPAV HDETTTHEENSKVQLLRVLETRKNVLRKEQAMAFARAVAAGFDIDNLGYLIAFAERFG ASRLMRACSQFIELWKRKHETGQWIEVEPEAMSTHSEFPPFNPSGIVFVGDNMKQNTE TMSVSNGEANGEDASKAEHKSGQQMGYQAAYPPWAMHPPPYHMQGMPYYPGPYYPPYP PVDDPRYHYSGRKSSRKHSSDSKESEVLDEGSDGSSSERGSSHGHKSHKKGKRSGKKK PSVVVIKNVNVTSKKHGSSESESQSSSEDGSQDSDDTHYKKRHGKHKSSGSKKKEGAK TNFDSGDDYNNKDESSYGQDADQGNWNAFQSFLMRAEEKTRSNDADMFSGEKAPPSRK KNNVNTADPILLAGGDSGDVYEQRGAGFDPVNGRSRAIRLQSNDELMMSGEGGRYMDG EIKEIEAGGGRYRRGTSEDFMLYGQERSMDRRSALDPLAEARYRNPNQVDKNGYAAAD ESFIIPLRSGSQDNVGPEYRATIDIDVELPTNTKKTSDGKAGTQLFYEPDELMPERGS EDASFGYDPAMDYESNMMVRAVKVEDSNDEDVSHSNDGDVKKPEKEKIRGTKDGSDKR KKDAILRRLSAPKTPLNDAQKRAQNMRAYKADLQKLKKEQTILFRDRGGTTEQVGGSK RVICKFRDRDDTVEQV</aaseq>

Gene Sequence

<dnaseqindica>6522..6626#4204..5663#3627..3838#2618..2770#2263..2324#2108..2160#1474..1513#1274..1394#1015..1194#502..560#gtgctacttgcaccaccttcttcttcttctctctccctcacacgcttcacactcctctcgctgttcttctctcctcctcctgtggctggctgcttgctctactgcaattatttattgccacctccaattcttagtactgcgagattaattactcattcctccccgcagtgccatgttcttgagtttctttcggtttttttaatccattttgcaacactctctgtcctgcagccagagctgcatttgctggggatttatactagtaggcggcttcagctttactctctcccctttctgcttctgctgcttctccctttccctctcaacttctcaagtggcagtggtgggagggtagcatctggcccaagcaaagcgccgggttcttggctctgctcgctttttttcgtggtaaatctgtgtgcaagatctggggtacaaaaggaggggacagcagcacaagggaggaggaggagttcttgcgttgggattctctcttcggcaatgaggcccgacgcgaggctggatgcggccgtgttccagctcaccccgacccggaccaggtgagcgagcgagcgagctagatctgcctgattcggtgaatttttgatctgttcttttcatcttttggggggttttggtttctgatgcggttggcaagaacatagttttgtgatgagaaagttggttgctagtggtgaactggctttgcattttggttggacttaaccagagtttgaggagtagtttttttggttggttgattgcaatttgtgtgtagcaaatgtttgttcttcgtctgttggagatgggggttctttgtgagcttaattttagtactagatctggtaaatctggtgtgatggcgaatgaaacggagctgattgatgctcaagatagttacttgatcatggtcatggaagcttcttgctgactgatactgagcactaatgcttgtccagtacgtcaccatcccaagatgtctgatggaagtttgtcattttttaccttttgcaggttcgatttggtggtgatagtgaatggccggaaggagaagatagcctctggcctgctaaacccgttcctggcacacctgaaggtcgcccaggatcagattgcaaagggaggatactcaattacgcttgagccgagctcaggggttggcgcgccatggtttacaagaggcaccgtggagaggttggtggcctttggttatgacaattacctgtggcattggcatttccaatcgggttattcacatgctacttctttgcagattcgtgcgcttcgtgagtactccggaggtgcttgagcgagtgacgacgatagaatccgagatcttgcagctcgaggacgccatctctattcagagcaacgataatcttgggctaagatctgtaagtcgacgattgtcgtttatgagtttattcttgttatttgcagaaaggtgacgcattcttgtttgctatctggaaggtagaagatcatggaggaaaattgactgaaagcaacgaaggtataacattattgttgttatttatcatgatgcattgaatggtgcttgcttgtgtcctctggggaacgcatacatctgtaacagctttccattgggccacacacacacacaaaaaaaaaaaagaagaggaagctgcagtccgatctgactgttttagaatttagaatgtagtcattatggagtttgatgtgacatcataacctattattgagttaggtacatacaactatgttgtaggtatgtatgaagtgccaattaatatattctgatttagggggcaaggcaattccttctattattttgtagctacaataaaactgttctcttactttataccttttaaattttcatacaagttttaaagatggagttcttaaactattaccatgatttattgatttaggtctcaatcttgagctagcagacaattataggaagtattgtgtcctactgttccgaaagaacctgatgacagattgacaggatgaccaattgagtttttattttccaatttcagttaccttgtcttaaagtagcttttgtatcctattatttattgtataacataacctgatactatctatgcactaacaggtacacgagcgaatcacagccctgatgcagataaggctattgttatataccaggtctgattatatatttgtaaattttgtatgtgcatccttcttcctttcctgtatgtatcatgaactagcactgaccccactggcattttcaattgatgacagcctggatcacagcctacaccagcagtgcatgatgagactacaacacatgaagagaattcaaagtatattggcaccaccaagaatatttttgttttgtatttttttaaaactttccatttccgggaacaaaaatatatatatttatatccctgaaagtagctgtgttttacaaatcacagcatagagtggagaataaaaaagagaatgttggtattcatttactttatttgttgttttgatttttattcaagctactacatatatgctctaagatcgcattcagtttcttttgatacttacctgtcctacatggggaagctgttaacagatacattctcttatgaacaacttacagagtccaactgctgagagtgcttgaaacccgaaaaaatgtcttaaggaaagagcaggctatggcttttgcacgtgctgtggcagctgggtttgacatcgacaatctgggttacttgattgcgtttgcagagcgctttggtgcttcacgtttgatgtaagtagtcttcgtcattagttgttttttttataagctggatatcttaatgccttggcccttttgtgctttaaacatatccttattgatgctattttatcttcaaaatgacatctttatttttgtctattcaatagtgtgttgtaaagtcagaacaatgttgatgctttatatgtgaatggcacacacagtagcacataatctagaacattactcttttccatatgcagaatattgttattactgttcccttcatttgtattgctcctaaacgttaaacctgcactggtaatttgtggtggatgtaataatcttaccattatttataaaaaatagagaaaggaagaggccccaaaaaagagagagaaaggggagagccggagagggaaacagatgatgacataccaagagggatatagcctgttgtctctgttgctgttattatttgttatctgtgctgctaacatcggtttaacggttttcatcatcactggtatactactatagtgtattcatcatcagctttcatggacatgatcggagtacggagtagcaggggcaaggggactgggttggttgggttgggacagggcactttaccttttcccatctcttcacccttttcttttttatattttttacttctctctctgtcctgctctcagcccattcttcctattgataatggtcaatctgcgttactcagttcagatagtgcatagatgcctcacctggtgttggtgccttcgtaccttatttattcagttatataaatttagttgttttagctaagctagtatttttgttatgaagacatttcccatgctaaactttttcagtgttaaaaattgaataggagggcatgttcgcagttcatcgaactgtggaagcgaaagcatgaaactggacaatggattgaagttgaaccagaagcaatgtctacacactctgaatttcctccttttaatccatcgggtattgtttttgttggagacaacatgaagcaaaacacggaaactatgtctgtttccaatggagaggcaaatggcgaggatgcttctaaagctggtacgcattcttctgcataatccagaaaagcctcctcacttcaattttttagcaatgtctataacacgggatgtgaaaaaatagcattttcgatgaattatcaaatatcaaaattcatatttaaaagcattaaggtagagaacttattccatttttcgttgccaagaatagaattgttattaatttgactgtctgcaaatgcatttagaaagcagtaaataaatttatttttgtctgttattctattcaaactttataccttgctgcactgtacactagtacatcatctttgattttagcgtgtctttgttttttctcttcgagattattggagcttacaagattgctttgtctctgctttacagagcataagtctggtcaacagatggggtatcaggctgcatatcctccatgggcaatgcatcctccaccttaccatatgcaaggaatgccttactatcctgggccgtactaccctccatatcctccagtggatgaccccaggtatcactactcgggaaggaaatcatcgaggaagcactcttcagacagtaaagagtcagaagtacttgacgaaggaagtgatggtagcagttctgaaagagggagttctcatggtcacaagtcacataaaaagggtaagcgatcagggaaaaagaaacctagtgtagttgtcataaaaaatgtaaatgtaacatccaaaaagcatggctcgtcggaaagtgagtcgcagtcaagttctgaagatgggtctcaagacagtgatgacacacactacaaaaagagacatgggaagcataagagctcaggttcaaagaaaaaggagggtgcaaaaactaactttgactctggagacgactataataacaaggatgaatcatcttatgggcaagatgctgaccaagggaactggaatgcattccagagtttcctgatgagagcagaagaaaaaacaagatctaatgatgcagatatgttttctggtgaaaaagcacctccatcaaggaaaaagaacaatgtaaacactgctgatcctattcttttggctgggggagattctggtgatgtatatgaacagagaggagcaggctttgatccagtcaatgggaggagtagagctattcggctgcaatccaatgatgaactgatgatgtctggggaagggggaagatatatggatggtgaaattaaggagatagaagctggtggtggaagatacaggagagggacaagtgaggacttcatgctctatggccaggaaaggtccatggataggaggagtgctttggatcctcttgcagaggcccggtacaggaatcctaatcaggtggacaagaatggatatgccgcggctgatgagtcctttataattcctcttagatctggttcacaagataatgttgggccggaataccgagccacgattgacattgatgttgagcttcctacaaacactaagaaaacttcagatgggaaggctggaactcaactcttctatgagccggatgaattgatgccagagcgtggatctgaagatgcttcatttggatatgatccggcaatggattacgaaagcaacatgatggtcagagccgtcaaggttgaagacagtaatgacgaggatgtctcacatagtaatgatggcgatgtaaagaaaccagagaaggagaagataaggggtacaaaggatggttcggataaaagaaagaaggatgcaatactcaggaggctctctgctccaaagaccccactcaatgatgcacagaaacgtgcacagaacatgcgagcatataaagctgatctccagaaactgaagaaagagcaggtattgtttctattttcccctttcttgtctccaagcagtttgaaacttagttcttctgcatggtgtaaatttaggtacattagttgacaattttttttaatccttatcatcactccaaaagcaccaagtctgaacacaatactgaataacggcaactttctgttattttacctatacagtaatgcatcaacagattaaaatgaacatgtgtcatgtgtacagaaattgccaattgaacccactataaagaattgattatttttttagttctcaaagtcttgtttcggctctgtatttgtagttgtaccatctaagtattttaacatagagtaaagtccatcaccggtccctaaatttgtaccgctgtatcatcctggtccataaacttgtaaatcgaccgttcaggtcctcaaacttgctcgactgtgtcatcccggtccctaaacttgcagatcactcgtttaggtcctccagcttgtttagctgtgtcaccccggtccctaaacttggatttgaatatcatctgggtcaaataggacggtctaaagactttatatttaaaaataattcataactttttcatgtgaactctaataaagacaaactttatatcaaacttgtagccctcgatgcgatctacaactttgtagttgattttttttattctaagtcattttttgtcccaaaatgtaattttaaaattaaaatttcaaaatatataaacatgcaacaatattttgggaccctaaacagttttaattcaaatcgcgtcgagggctacaattttaatataaagtttgtcttcattagagttcacatgaaaaagttatgaattattttttaatataaagtttttagaccatcctgtttagggaccggggtggcacaactgaacaagttggtggatctaaacgagtgatttgcaagtttagggaccgggatgacacagtcgaacaagtttgaagacctgaacgatcgatttgcgagtttaggggccgggatgacacagcggtacaagtttagggaccggtgatggactttactctttaacatatatctgagcaactttccctttctttcaggaggaagaacaaatgaagcgactggagaggcttaaactagagaggcaaaagagaatagccgcaagaagtaatgggaagagtgatcctcctaaagcaagcagagagcatgccaatggactaagtatatcagttccatctctaactggtctgaagaaagaaaagagtggatcgaccgaatcattcagcgagcgactgaagaggctggctgaacccaagagcatcggtggtgctgaccatctttcaaatccaaagtcagttaccacagaccactcaaggagaagaagcatggtatgagctcatctgatatcggcagcgaaaaattccgagtatttatcatgtaatttcacaacccagaaaaacaggacgaaaataacagccagatctccaaaagctgtacagggaaaaagtttggtgttgattattaagtggtggtgccttgcatctgagattgcggatgagaaatttgagaattattacaatgggtctggcattttaatttttcggtttcatatattgtattcattcttttgattgaaggtggcttgtaatagctgtaaacctgtttttgttcatggcacatactactatattgtggatgtatttagtggagaaatcgatcagtgtgtttgggtg</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0445600, RefSeq:Os07g0445600