BGIOSGA010070

From RiceWiki
Revision as of 15:32, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA010070

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010070, complete gene.

LocusTag

OSJNBA0035I24.8

Ensembl Transcript ID

BGIOSGA010070-TA

Ensembl Protein ID

BGIOSGA010070-PA

Length

7212

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:30593742..30600953

Sequence Coding Region

30600673..30600953,30600017..30600163,30599703..30599766,30599389..30599598,30597083..30597277
,30596700..30596998,30595288..30595564,30594877..30595152,30594293..30594526
,30593742..30594092

Genome Context

<gbrowseImage1> name=IndicaChromosome03:30593742..30600953 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:30593742..30600953 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAAGTAGGCGCTCTTTTGACCTCAGCTGGAATCAACATTAGCCTCTGTATACTTTTTTTGTCACTATATTCCGTTCTGAGGAAGCAACCGCAAAATGTTAAGGTCTATTTTGGAAGAAGGATTGCTGAGGAGAATAGTAGGCTCAGGGAGGCTTTTATTTTGGAGAGATTTGTTCCATCCGCTAGCTGGATTTTGAGAAGTCTTCGATGCACGGAGGATGAACTCTTAGCTACTGCTGGGTTGGATGCAGTTGTCTTCAATAGGATTCTTGTATTTAGCATACGCATATTCTCCTTAGCCGCTTTCCTTTGTGTACTTGGAGTTCTTCCACTGAATTATTTTGGACAAGATATGCTCCATGTACGGATTCCTTCAGCATCGTTGGAGACATTTACAATTGGAAATATGCAAGAGAGATCAAGATGGCTCTGGGTCCATTGTGTTGCGCTGTACATCATATCTGGTGTGGCTTGCCTTCTTCTATACCTTGAGTACAAGCATATTGCTAGGCTGAGGTTACTTCATGTTTCTCGAGCATCGACCAATCCTAGCCATTTTACTGTGCTTGTTCGTGGAGTACCAAAATCAACTAAAGAATCAATTAGTTGCACTGTTGAGAGTTTCTTCACCAAGTACCATGCGTCGAGTTACCTTTCTCATCAGATTATTTATAAAGTCGGGAAACTTCAGAAGATTGTGACTGGTGCAAAGAAGGCTTATAAGAAGTTTAAACATTTCAAGGGCACCACAGTTGATCAGAGATGCGGACCAATTACATATAGATGTGGTCTTTGTGGAGCTTCATCAAAGTCGTTCGAGCTGCTGCCTGTTGAACCTGAGCAAGAGATGAAAAAACATGATGTGAAAGATTCAGAGTTGAGCTTACCTGATAAGGATTGTGGTGCTGCTTTTGTATTTTTCAAAACTCGGTATGCAGCCCTGGTCGTATCAGAAATTGTTCAGACATCCAATCCTATGGAATGGGTTACTAGTCTTGCTCCAGATCGAGATGACGTATATTGGTCAAATCTTTGGTTACCCTACAAGCAGCTTTGGATTCGCCGTATAGTTACACTTTCGGGTTCTATTGTTTTTATGTTCCTGTTTCTCATACCTGTGACATTTATACAAGGTCTAACTCAGTTGGAGCAGCTGCAGCAAAGGCTCCCTTTCCTAAATGGCATATTAAAAAAGAAGTACATAACCCAGCTAGTGACCGGATACCTTCCCAGTGTCATCTTGCAAATATTTTTGTACACTGTTCCCCCAACCATGATGTTTTTTTCTACATTAGAAGGACCCGTGTCCCACAGTGAAAGGAAGAGAAGTGCCTGCTGTAAAGTATTATACTTCACTATTTGGAATGTATTCTTTGTGAATGTCCTATCAGGTTCTGCAATTAGCCAAGTGAATGCGTTATCAAGCCCAAAGGACATTCCTATGGTGCTTGCTAGAGCGGTACCTGTACAGGCTACATTCTTTACCACCTATGTACTGACTTCTGGTTGGGCTAGTTTATCATCAGAACTTATGCAACTCTTTGGTCTCACATGGAACTTTATAATGAAGTATGTTTTGAGAATGAAAGAGGATAGCTACTTTGTCCCGTCATTTCCCTATCATACTGAAGTGCCAAAAGTTCTGTTGTTTGGACTACTGGGATTCACATGCTCTGTATTAGCACCTCTCATCTTGCCCTTTTTACTGGTGTACTTTTTTCTTGGTTATGTTGTGTACCGCAACCAGTTCCTCAATGTTTATTGCACAAAATACGACACAGGTGGTCTGTATTGGCCGATTGCTCACTATACAACAATCTTCTCTATTGTGCTCACCCAGATCATCTGTCTTGGTGTCTTTGGGCTTAAAGAATCCCCAGTAGCTGCAGGCTTCACTGTACCTCTCATCATCCTCACTCTTTTATTCAACCAGTATTGTAGCAATCGTCTTCGGCCATTATTCAAGACTCTCCCTGCACAGGATTTAATTGACATGGACAGGGAGGACGAGCAATCGGGAAGAATGGATGACATTCACCACCGTCTTCATTCTGCTTACTGTCAGTTTGCTGACACTGACGACATACCTCTGAAAGGAGTTCACGTTGACAGAGATGCAGAAGCAAGTGGAAGTTCTGGTGAATCTAGCTGCAGAGAAGACACCAACCAACCCACAACCAGTGACATTTCTCACCCTACACTGGAAGGACTCCCTGTAAACCGGCTACGGCATGTAGTGAGGTCGCTCAGTTCCATCATCAGGTTACAAAAGAGAGGCCTGTCACCACAGCCCGCTGGACCCTCCGCCGATGTAAATCCGCAAACTGCATAG</cdnaseq>

Protein Sequence

<aaseq>MKVGALLTSAGINISLCILFLSLYSVLRKQPQNVKVYFGRRIAEENSRLREAFILERFVPSASWILRSLRCTEDELLATAGLDAVVFNRILVFSIRIFSLAAFLCVLGVLPLNYFGQDMLHVRIPSASLETFTIGNMQERSRWLWVHCVALYIISGVACLLLYLEYKHIARLRLLHVSRASTNPSHFTVLVRGVPKSTKESISCTVESFFTKYHASSYLSHQIIYKVGKLQKIVTGAKKAYKKFKHFKGTTVDQRCGPITYRCGLCGASSKSFELLPVEPEQEMKKHDVKDSELSLPDKDCGAAFVFFKTRYAALVVSEIVQTSNPMEWVTSLAPDRDDVYWSNLWLPYKQLWIRRIVTLSGSIVFMFLFLIPVTFIQGLTQLEQLQQRLPFLNGILKKKYITQLVTGYLPSVILQIFLYTVPPTMMFFSTLEGPVSHSERKRSACCKVLYFTIWNVFFVNVLSGSAISQVNALSSPKDIPMVLARAVPVQATFFTTYVLTSGWASLSSELMQLFGLTWNFIMKYVLRMKEDSYFVPSFPYHTEVPKVLLFGLLGFTCSVLAPLILPFLLVYFFLGYVVYRNQFLNVYCTKYDTGGLYWPIAHYTTIFSIVLTQIICLGVFGLKESPVAAGFTVPLIILTLLFNQYCSNRLRPLFKTLPAQDLIDMDREDEQSGRMDDIHHRLHSAYCQFADTDDIPLKGVHVDRDAEASGSSGESSCREDTNQPTTSDISHPTLEGLPVNRLRHVVRSLSSIIRLQKRGLSPQPAGPSADVNPQTA</aaseq>

Gene Sequence

<dnaseqindica>1..281#791..937#1188..1251#1356..1565#3677..3871#3956..4254#5390..5666#5802..6077#6428..6661#6862..7212#ATGAAAGTAGGCGCTCTTTTGACCTCAGCTGGAATCAACATTAGCCTCTGTATACTTTTTTTGTCACTATATTCCGTTCTGAGGAAGCAACCGCAAAATGTTAAGGTCTATTTTGGAAGAAGGATTGCTGAGGAGAATAGTAGGCTCAGGGAGGCTTTTATTTTGGAGAGATTTGTTCCATCCGCTAGCTGGATTTTGAGAAGTCTTCGATGCACGGAGGATGAACTCTTAGCTACTGCTGGGTTGGATGCAGTTGTCTTCAATAGGATTCTTGTATTTAGGTATGTACACAATTACTTGATTCTCTGTTCCACTTAAATATTTTTTATCTTATTTGAAGTTTATATAGATGTTTCTTTTTATGCTGTTTCTTTGTGTGCCTTGAGAGTTTAGACCATCAGGAATCAACTTATACTTTTGCTTAAAAGGTTCGCCGTGGCGCTTTGAAAATGAAAATCAAGCTAAATACGATTATTTAAACTAGTGGTTTTTAATCTCTAATTGTTGACTGGTATGATGAGTCATTTCCTCTGTCAAATGGGATAGGTAAAAAAACACAAAATAGAATATGGGAATCAAATAACTTCAAAAAAGTTAATGATAATAAAAAATCTTATGCCAAAGTTGATAATGTGCATACCAACATTCATCGGGGTGTCACATGGTATGCCACATAAAGTTAAGTTACTTTATATATATTCATTTGCCTACTGCATTCTCACTATATTACTTAAGTCTTCAATTTTGGTTTTATATCCAAGATATGCTTATGTGTTTTTCTTTTCAATAGCATACGCATATTCTCCTTAGCCGCTTTCCTTTGTGTACTTGGAGTTCTTCCACTGAATTATTTTGGACAAGATATGCTCCATGTACGGATTCCTTCAGCATCGTTGGAGACATTTACAATTGGAAATATGCAAGAGAGATCAAGATGGTGAGCTATGGAGCTTCTCTTACATGATTATGTTCGAACTTTAAGAGTTCAAATGTTAAATACAACATCTTATGTATTTATCTTCAGTCCGTAACTGATTTTATACTGTCTGCTGGTGTGGTGTTATGTGCAATCTAAAGTAACTAGTTCACGTTTATTGCATGCACTGATAACTGAATTGTTTAGGCATACATTATAGAAAGTCATAGATACCTCTTGGATTCTTTTTACACATTGGCTATAACTGCAGGCTCTGGGTCCATTGTGTTGCGCTGTACATCATATCTGGTGTGGCTTGCCTTCTTCTATACCTTGTAAGATCAAGTCATTTGATCTTTCAATAGTTCATAAATGCTAGTTAATCTTATCTTTAGACCTTACTAGCTGATTTATGTTATTTTTTATGTGGTTCCTTTAGGAGTACAAGCATATTGCTAGGCTGAGGTTACTTCATGTTTCTCGAGCATCGACCAATCCTAGCCATTTTACTGTGCTTGTTCGTGGAGTACCAAAATCAACTAAAGAATCAATTAGTTGCACTGTTGAGAGTTTCTTCACCAAGTACCATGCGTCGAGTTACCTTTCTCATCAGATTATTTATAAAGTCGGGAAACTTCAGAAGATTGTGGTAAGTAATACTGCAATAATTAATTGTGTAAATTTTCCAAATGAGGAAATTTAATGACGCTGCCAGTGAGAAACAGGATGAAAATGTTTAGTTATTTGGTTATTAGTCTCCTAAGGCCTTGTCTGGGAAACCCAAAATTCCAACCTATCCCTGTGGAAGACCGAGAAATTGCACTATAATCCTGCCCTGTCCATGGGATGAACAGGGAATTTGGGTCTCCCAGATGATACCTAGAGATTATTTATGCCCACACTGCATCATAACAGTACTAGGATCTGCTTGCTTTTTATAGTTAGTCCAATCAGTTGATAAGCACATATGCACTGTTAGAGGACTGCCTGAAGCCTTTAGCTGAGTGGTAGGGCATATGGTTGCAAACATGTGATGGTTGTGGATGTGTGGTTAACTGGTTATTCTCAACTCTTTTGAGAAAAATATCTCACTAAGAATTGGATTGCAAAGGTTTTTACATAGGAAAATACATCCAGGATTGGCTAGTGAGGAACTGAGCCTAGCTCAGTTGGTCAATGGTGTGGATGTACGCCTAGACCACCCAATTCCGATTCCTTGTTGAGGCAAATTTGGGTGCCGATTTTCTTGTTAGTACAATGTTCCCTAGTTCCTGCTAGGTTGATCCCTAGTTGGAGTAATTGGAGTAATTAAAAGTGAGGGCGATCTGCTCTCCCCACAGCGCTCTGCCCGTTTTTGGCATGGCGTGTTCGTTTCCGCGGCTATCCACGTCATCCGGGGCTGGTCCTGGCAATTTGCAAAAAAGTCCTCTCTTAACTTGATAATTGGAGTAATTAAAAGTGAGGGCGATCTGCTCTCCCCACAGCGCTCTGCCCGTTTTTGGCATGGCGTGTTCGTTTCCGCGGCTATCCACGTCATCTGGGGCTGGTCCTGGCAATTTGCAAAAAAGTCCTCTCTTAACTTGATAATTGGAGTAATTAAAAGTGAGGGCGATCTGCTCTCCCCACAGCGCTCTGCCCGTTTTTGGCATGGCGTGTTCGTTTCCGCGGCTATCCACGTCATCCGGGGCTGGTCCTGGCAATTTGCATTGTTAAGTCCCTCAATATAAGTTTACTGTCTTATGTATTCTTACGTAATGGCCCTCTGTGTCTTGGTATATTCTATGTGAAGGAGACGAGATTCCGAATATAGGGACCGCGCTTTGAAAGAAGGAAAATAAGGGGGTTTTCTGCGAAAGGAGAAAATCCCTATCCCTCCTTTCCCCGAAACCCTAGCCAACACTGTTCCCCCAACCCTCTCTTCCTCTCTCGCTCTCTCCCCTGCCCTTGCGACGGCGCTGCCCTGTGTTCTCCTCGCCGCCAACGGCCTCCCCGCCGCATTCTCCCCATCCTCCCCCATCTCCTGGCGCTCCCCAATCCCCGTCAACCCTAGCACGTAGAGGCCACTGCCGGTCTGCCCTCTCGTTCTGTTAAAGATTAGCAGGTACGGTCTCGGACACTTGTCGGTTAGACATTATGTTTTTTACTTCCAGTATGCAGAATCTTTGTAGCTTTCTAGAGCACAAGATCTTTGTTTAATCAGATAAATCGGGACTACAATAAGAACTTGGTACAGCCATTTAGAAGTTCTGTGCACTATTTTGACCTAGGTCATTTATGCATATTGCTTATGGCCTGTCCCCTTGAACATTCATATCCCTCAGTATCAGCGCCTCTCCTGACTTGGCATGCTAGAAAACTCTCAATACTTCTGCTAAGTTCTTGTGCACAATCTTTGTATTTTGTAGTGCTTTTGCTCACCACGCCCTTTGCAAATGTAATTCCTTTTTTGGTGGTTAGTTTGAATAGATGACACTCAAATTTTTAATTCATGTGATAGATGCCGTCGCATAACTAAAATGTATATCTGCTAACAGACCAAATTAATAGTGTAGGTTTGTTGCTCCATGATACTTTGTCCAATATATGAAAAGAGAATTATTGATTGATCATAGTCATAGATATTTGAATGAACACATTTGATGTATCTTTATGTTTTCCCTGTTTGTAGTGATAACTTTTGTCCCATATCTGGAAAGGGATTTTTGCATCTTCATATATTTCCCCTGTTTCTAGTGGTAATTTTGTTTTTTTTTTTGGCAGACTGGTGCAAAGAAGGCTTATAAGAAGTTTAAACATTTCAAGGGCACCACAGTTGATCAGAGATGCGGACCAATTACATATAGATGTGGTCTTTGTGGAGCTTCATCAAAGTCGTTCGAGCTGCTGCCTGTTGAACCTGAGCAAGAGATGAAAAAACATGATGTGAAAGATTCAGAGTTGAGCTTACCTGATAAGGTCAAACTGGCAATAAAATTGGTTATTTACTGTTCTGAATAAATTAGCCTAAAACAATAATTTTATTTTGGGAGATGAATGCAGGATTGTGGTGCTGCTTTTGTATTTTTCAAAACTCGGTATGCAGCCCTGGTCGTATCAGAAATTGTTCAGACATCCAATCCTATGGAATGGGTTACTAGTCTTGCTCCAGATCGAGATGACGTATATTGGTCAAATCTTTGGTTACCCTACAAGCAGCTTTGGATTCGCCGTATAGTTACACTTTCGGGTTCTATTGTTTTTATGTTCCTGTTTCTCATACCTGTGACATTTATACAAGGTCTAACTCAGTTGGAGCAGCTGCAGCAAAGGCTCCCTTTCCTAAATGGCATATTAAAAAAGTAAGTAATCTAAACGCTCAATGCCTACCTACTGCTTCTTTGCTAGGTGTCATAAAGAAAAAAAAAAGAGTGATTTTCGCATCAAGCATGTCAGAGATTACTTGGGTGTGTTTATGTACCCTAACTATTTACCTTATTTGATTGGAGAGACATGGCTATGGGAAAGTACATTTTTACATCATATATATGTGATAATTGTGTCATTTTTTACCTTTCCATGTGAAATCTGGAAGTCCAGGGTTGGGAGGTAGACTTGCTGTCATTACCGATTTCTTCTCCATTAGCAGTTTATTATAGTAACATATACATTTTTCTAGATCTACTATTTGGTGCTCAGGGCGTCCCCTGTCTGTTTACAGTCACAGGGGACGCATTTACTACTTTGGGGGATGCTTCTACTATCGCTGAATATTTAGGCCCTGTTTAGTTCCCAAAATCTTTTTCCTAAAAACATCCCATCGAATCTTTGGATACATGCATGGAGCATCAAATATAGATAAAAACAAAAACTAATTGCACAGTTATGGGAGAAATCGCGAGACGAATCTTTTGAGTCTAATTAGTCCATGATTAGTCACAAGTGCTACAGTAACCCACATGTGCTAATGACGGCTTAATTAGGTTCAAAAGATTCGTCTCGCGGTTTCCAGACGAGTTATGAAATTAGTTTTTTTATTCGTGTCCGAAAACCCTTTCCGACATCCGGTCAAACGTTCGATATGACACCCAAAAATTTTCATTTCGCGAACTAAATAGGGCCTTACTACTTTGGGGGATGGATTTTTTTTTTAGATAATGGAAGCTTTATTTAGACTCAGTTAATTACATCAAGATGATACAATCAAACTGAGTCACCCCCGGCCTCTGCATAAAATGCACACAGCCAATGGGGGATGGATTTACATTCTCAGGGGTGGGTCACTGTTAGTTCCCTTGATGCTAGTTAGCACTTCCATGTATTTTTGTTTGTGTTGCCATGCCGTATGCACCATGTTCAAAACATTCCATCTGTTTTTTAGGCTTTAAACTTGAGGTAACATTATAATTATTGCACGCACAGTATTATCTTCTGGCATGTTATTTTATTCCTTTATTCATTTGTAGAGGAACATAAAAATGTCTATTTCTCTTGCAGGAAGTACATAACCCAGCTAGTGACCGGATACCTTCCCAGTGTCATCTTGCAAATATTTTTGTACACTGTTCCCCCAACCATGATGTTTTTTTCTACATTAGAAGGACCCGTGTCCCACAGTGAAAGGAAGAGAAGTGCCTGCTGTAAAGTATTATACTTCACTATTTGGAATGTATTCTTTGTGAATGTCCTATCAGGTTCTGCAATTAGCCAAGTGAATGCGTTATCAAGCCCAAAGGACATTCCTATGGTGCTTGCTAGAGCGGTACCTGTACAGGTGAATTGCATGCTCACTTATTTTGGCTATCAGGATGCAGCAAGTATTTCTGTTACGCATATACAACTTGTTGATTTGTTAATAGTGTTGTTCAATTTTACTATAATTTTTTAATACTGTTTTTATTTGTCTCAGGCTACATTCTTTACCACCTATGTACTGACTTCTGGTTGGGCTAGTTTATCATCAGAACTTATGCAACTCTTTGGTCTCACATGGAACTTTATAATGAAGTATGTTTTGAGAATGAAAGAGGATAGCTACTTTGTCCCGTCATTTCCCTATCATACTGAAGTGCCAAAAGTTCTGTTGTTTGGACTACTGGGATTCACATGCTCTGTATTAGCACCTCTCATCTTGCCCTTTTTACTGGTGTACTTTTTTCTTGGTTATGTTGTGTACCGCAACCAGGTGAGAAACTAGAGATTAAATTTTGATTCCAAATCAATAAATTATCCGTGATTATGAATATTGTTGAACCATAGTTATAGTGAAGATGACCAGACTAACTAATTATGGGAAGTTGGTATGAGTGCTTATGCATTTGTACTTTTTAGGTGAAAATGCAACTGATGCATTTTACATATACATGCTTCTAATTTTGTGTAAATTGTTGTTTCCTGGTTCATGAATGTAAATTCTCAGAGTGCAAAGTTTTGTGAAAGATTGGTCTGTTGTGCTTCTTTTCCCCGTTCCTACAATCTTTTTTTTGACGTAACCGTTCCTACAATCTAATGGGTTAACTTTTTTTTCATTTGCAGTTCCTCAATGTTTATTGCACAAAATACGACACAGGTGGTCTGTATTGGCCGATTGCTCACTATACAACAATCTTCTCTATTGTGCTCACCCAGATCATCTGTCTTGGTGTCTTTGGGCTTAAAGAATCCCCAGTAGCTGCAGGCTTCACTGTACCTCTCATCATCCTCACTCTTTTATTCAACCAGTATTGTAGCAATCGTCTTCGGCCATTATTCAAGACTCTCCCTGCACAGGTTAGTATGAGTTCACCTTTATATATTCTTGGAGGGATTTACGGCTAAACTTCTTGCCAGTTTACATTTATGTGCTCTCTACTGAGAGTACATATCTTGCACTTCTCTTCTGAAAATGCCAAAAAGTCCTATGTCGAAGCATTATCCCTGGCTACCTGAAATGAAATCTCTTACATTAGTTCTCTCTTTCTATTACATAGGATTTAATTGACATGGACAGGGAGGACGAGCAATCGGGAAGAATGGATGACATTCACCACCGTCTTCATTCTGCTTACTGTCAGTTTGCTGACACTGACGACATACCTCTGAAAGGAGTTCACGTTGACAGAGATGCAGAAGCAAGTGGAAGTTCTGGTGAATCTAGCTGCAGAGAAGACACCAACCAACCCACAACCAGTGACATTTCTCACCCTACACTGGAAGGACTCCCTGTAAACCGGCTACGGCATGTAGTGAGGTCGCTCAGTTCCATCATCAGGTTACAAAAGAGAGGCCTGTCACCACAGCCCGCTGGACCCTCCGCCGATGTAAATCCGCAAACTGCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010070