Os07g0452100

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Revision as of 08:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0452100| Description = Glycoside hydrolase, clan GH-D family protein| Version = NM_001188251.1 GI:297725632 GeneID:9269328| Length = 4521 b...")
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Gene Name

Os07g0452100

Description

Glycoside hydrolase, clan GH-D family protein

Version

NM_001188251.1 GI:297725632 GeneID:9269328

Length

4521 bp

Definition

Oryza sativa Japonica Group Os07g0452100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:16240114..16244634

Sequence Coding Region

16242010..16242219

Expression

GEO Profiles:Os07g0452100

Genome Context

<gbrowseImage1> name=NC_008400:16240114..16244634 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:16240114..16244634 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gtaatatatagtctcaagaaaacaagaggaaatggttgttatttcatcatgctaaaacggaatcggaattgttttcgtacaatattcagctcaagaacttgcagcaaaacgatgcccggatctctgggctacgaggacatcgatgctaagacatttgcatcatgggtaatccgttgtacagaactttctaggcataaatgccatatgtga</cdnaseq>

Protein Sequence

<aaseq>VIYSLKKTRGNGCYFIMLKRNRNCFRTIFSSRTCSKTMPGSLGY EDIDAKTFASWVIRCTELSRHKCHM</aaseq>

Gene Sequence

<dnaseqindica>1897..2106#aactcgccaccgtagaggagttttgctccagccacagcagctaggtacgtacgtagttttgtgagggaaacaaccaaaagagagccaggtagctagctcgctcgcaaggtgaacggaggtggtggccatgggctcctacgctttgccacggcggtctctcgtcctcttcctcctctccgccgccgccgtcgcgtcgacggcagcatgggctgccgcttcgtcggcggccggcggtggtgatgatgccgctcgccgcagcctcctcgacaacgggctcgggcggacgccgcagatggggtgagagggtttgggtttttccttttctttttcctccatgagaagaaggatagctagcgttgaattaattccatctgctcgatctgatcgatctctcgcgtgcgttcatgtccgatctgttttttcttttttcaggtggaacagttggaatcatttcgggtgcaacatcaacgagaacaccatccggagcaccggtaatttaagctttaaattaatgaccaaaccttatggatatacacgtatctatcatattgatcgacttgataatacaatgttgtgttgaactaaaattattcaatatgtatatgaattttgtgttgagagtaaaacatgataagcggtatgcgagtagcgagacacgccgaaaacaaactgagcatcaacatgggaaacgttcttttttttttcaaacagaaacaacatataggagtatatgtctataatatatttcctttttacagtcggagtaagaataccgtcaaaattttagagcccgaaaacaagagtcacagaaacgttttagttttccccttttattagttgtaggtgcatgtatgaagccctgcaatctgtttacattaaggccttgttttcttgtgatctactatttaagtggagtttatatctatatctgaatatatctatgtctatgtctatgtctttcttcagctctatctatatctatgcatttatacctatatctcatttatgaattcccattttgggaattaaaaactatatatatacgattgggactccaaaccgaatatatatagcttaatagttattaattctaaattcgatttttggtttcttttgaattataacaattctgattaggtataaggcacataagtaaatagtttatgattgcacaggtcgccaactagttaatacttccttcgtttcatattataagactttctagcattgccacagtgaggaatgataagatgttataccatatatatctcatctaataagtcggtggacttcgtaatttttccaactagcatgggaattttctggaagtgtccaatcatatgaacatattagattatcgccgaaatgtatactagttttatatatcaaaatatggtctaattctgatgtggatttttaaaatcaaccagttgacgcactcatctccaccgggctcacgaaggctggatacacttatgtcaacttaggtggagtatatattaatttgtgtattgattaattagtactattaatttgatatttggagggagtgccaaataggctagctaacatcacactgcatttaattgaccacagatgattgctgggcagattaccaaaggaccaaagaggcaagccttcttattttcctccttttttttttctttttttttttttgttttcagttacagaggcataacatgtacttctccctgaacattaattaacttatcagtgcactcttctaacatgctatgttaaatattaacactctttgagtatcatcagggttacatagctgctgatccaaagaagttcccttcggggattaaggcactcgcagattatgtgcacagcaaggggcttaaactaggcatatactcttcagccgggtaagtaatatatagtctcaagaaaacaagaggaaatggttgttatttcatcatgctaaaacggaatcggaattgttttcgtacaatattcagctcaagaacttgcagcaaaacgatgcccggatctctgggctacgaggacatcgatgctaagacatttgcatcatgggtaatccgttgtacagaactttctaggcataaatgccatatgtgactctgcatgtttctgttaatcatacatacatacatgcatgtccgaaatttattccattattttcctaatccaagtaaacagacccaggatttattattcctggaagaaaaaggaaaattttgttgaacatttttacgttcttgtgaccaatatgcgaaagcagggtgtggattacttgaagtacgacaactgcaacagtgacggctcgagcgaaaccgtcaggtatatacagattctctagcagcacctcacgtaagataattgttcatcgcaaattcctcccaattcccaagttcacatattggttcatgcatcctcagattccccaagatgtctttcgctctgagaaaaaccggacgtccgatcttctactcgatctgcgaatggtacgttgtactggccttgtgtaaaaaattgtaacctaataactggtattaccaaatattggtaaacaaaccaaacacacattaaacagttcaaaagttaagtaactccagatataactacacttaatcaaatcaatcatatatacatccacatgtatttattttaccaaaggcgccaccatagttcgatgaggttaacaaacacatactttctctattcttaaataaacaacaccattaactttcgatcaaacatttgatcatttgtcttattcagaaatattattcaaatgcataatgtatgaattatacttaaagtacttttagtgataaaataactcacaacaaaataaataataattacgtttaaataagaggaatggtcaaaagttaccaacatcatctattaaaaaacaaatagagagatagtaaaatattttcttcgttgtttactttactaaacatttttcctgagatttgagcttggccggcgtgatcttcaggggccagaggaatgtggcgacgtggggtggccagtacggcaacagctggaggaccaccggcgacatcaatgactcatgggccaggtaaaccgccgccgccgccgcgagccgctggccctctgctccggccggcgaccgatttcggttgcattatgctgatcgcgacatgtgtgatgtgtcttgtcctttcctttgatttctgcgtttgtttgccggtgattgatgtaatcgagcagcatgctgagcaacatcgacagcaacgacgcctccgccagctacgccaagcccggcggctggaacggtatagctggcctcctcaccttcgtcgtcttcgttgatctgctatatatctgtctgtctgtctgtctctaatttgttccctgcagatcctgacatgctggaggtcggcaatggagggatgacgaacgacgagtacgtcgtgcacatcagcctttgggcgattgccaaggttggttggcacacaccatctctgaaaatcttgatctctgatctctggtctttgtcgaattcagttgagattcttgaatgattcttatgtttgtgaatgcttttgcaggctcctctgatcatcgggtgcgacgtgaggagtatctccagggagacgatggagatcctctccaaccctgaagtcatcgccattaaccaaggtcagatcagcattaagaaaaagtcattcttagccactgtattttttcttaatttgttgttactgaaacacttgttcttatcaaacgaacaatgtgacgcagatccattgggcgtccagggaaagaaagtcaggaagtacgacaacgaaatcgaggtgtgcagcattattatagctactaccaaaaatcatcaacagattttcattccaaactaaatcgcgatcttgaatcacatcttcctacaggtatgggcagggccgctctcccagcagaggacggcggtgctgctgctgaaccgcggcgccacgggcagccggcagatcacggcggcgtggcaggacatcggcgtcggccccggcgtcgccgtcgaggcgaagaacgtctggctggtgagtagtaattctcgcatcgatccgtgatccatccttctgcttctgccatgcatcatctcaaaaaatctgtcttactgctgacgattcattcattctcttcgtaaccgtggttgcgttgcgttgcctgcagcacgcgacggcgccggggaggttcaccggcagcctgacggcggaggtggcggcgcactcgtgcaagctcttcgtcctcacgcccgtcggccgggccagcgaggagcggagctaggcagctagctggagattggacgccgtcgtgggatcgaactatatataggattttagattgtcccaatacgcgtgtgcgtctgtgacaacaagctagaatgacaaactctaagcagttagcttgtgatctgcactctgcatgcagttggtgatctaaatttagagtgtattgcgactcgtacgtgttcgtcgtttaaacctcgcaaaatcaattccccaagcc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0452100, RefSeq:Os07g0452100