Os07g0452400

From RiceWiki
Revision as of 08:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0452400| Description = Protein of unknown function DUF82 family protein| Version = NM_001066085.1 GI:115471902 GeneID:4343132| Length = 447...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os07g0452400

Description

Protein of unknown function DUF82 family protein

Version

NM_001066085.1 GI:115471902 GeneID:4343132

Length

4474 bp

Definition

Oryza sativa Japonica Group Os07g0452400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:16255953..16260426

Sequence Coding Region

16255953..16256411,16256633..16256764,16257503..16257626,16258789..16259102,16259275..16259351
,16259453..16259588,16260089..16260292,16260367..16260426

Expression

GEO Profiles:Os07g0452400

Genome Context

<gbrowseImage1> name=NC_008400:16255953..16260426 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:16255953..16260426 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgccgccgcgcccgcgccgcctgcctcgccgccgctcgccgtgcacctcgtcaccggcggcgggtcctcgccggagcacgcgctcctcctgcgctccctcgccgcggcgcgcgtcgtcgccctcgacgccgagtggaagccgcgccgccgcggccccgccgtcgccgatgacccttcggcggcggcggcggctactccgcccccgctgcagttccccacggtcacgctcctccaggtggcatgccgcggcgacggcgacgggggaggggctgcggctgccgaggtgttcgtcgtcgacctcctcgcggtgccgctggccgaattgcgggagccgctgcgggagctgttcgagaggcctgaggtgctgaagctggggttccggttcaagcaggacctagtgtacctctcggccaccttcgccgctgccctcggctccagtgccggattcgagagagtggagcctttcttggatgtcaccaacgcttattactacctgaaaggccatgacatgcaaaagaggcttccaagggagaccaagagtttggcaacaatttgtgaggaactgcttggtgtttatttatcaaaggaacttcaatgtagtgattggtcataccgtcccttaagtgaaggtcaaatacaatatgctgcatctgatgcctactatttactcgacatatttgatctattccatcaaaaaatcagaactgaagggaagtgtttgcctacaaatgagctaacatcagatggccattgcccccaaagggacgcagaatgttcttcgtctgaagatgctgtttgctttgatgactattttacatccgttgtgatgaagtacgctgagaagattttgcttacagaatcagatacaaaaccacgttcatcaagacgaaaagaaaaacaaaaacttgcaaccaatgccaaatgcaaagagaagtttgagggcagtactgaatggcagggtcttcctccatgggatccttctgctggtggagatggctgcccaaaatttttgtgtgatgtgatgattgagggtttagctaagcacttgagatgtgttggaatagatgctgctactccatcctcaaggaagcctgaaccaagggaactgttaaatcaaacctataaggaaagaagagtattacttacaagagatgtcaagctcttaaaatatcaatatttgacaagtaaccaggtatacagagtgaagagccttctcaaacatgatcaactggcagaggtgattgatactttccagttaaagatatccgaggataagcttatgtcgagatgtacaaagtgcaatggaagattcatccaaaaaccgctcacactcgatgaggctattgaagcttcaaaaggtttccagattatcccttcctgcctcttcaagcgaaacttggagttctggaagtgcactgactgcaaccagctctattgggagggtactcaataccacaatgcagttcagaagtttttgtcagtatgcaacattagcgactga</cdnaseq>

Protein Sequence

<aaseq>MDAAAPAPPASPPLAVHLVTGGGSSPEHALLLRSLAAARVVALD AEWKPRRRGPAVADDPSAAAAATPPPLQFPTVTLLQVACRGDGDGGGAAAAEVFVVDL LAVPLAELREPLRELFERPEVLKLGFRFKQDLVYLSATFAAALGSSAGFERVEPFLDV TNAYYYLKGHDMQKRLPRETKSLATICEELLGVYLSKELQCSDWSYRPLSEGQIQYAA SDAYYLLDIFDLFHQKIRTEGKCLPTNELTSDGHCPQRDAECSSSEDAVCFDDYFTSV VMKYAEKILLTESDTKPRSSRRKEKQKLATNAKCKEKFEGSTEWQGLPPWDPSAGGDG CPKFLCDVMIEGLAKHLRCVGIDAATPSSRKPEPRELLNQTYKERRVLLTRDVKLLKY QYLTSNQVYRVKSLLKHDQLAEVIDTFQLKISEDKLMSRCTKCNGRFIQKPLTLDEAI EASKGFQIIPSCLFKRNLEFWKCTDCNQLYWEGTQYHNAVQKFLSVCNISD</aaseq>

Gene Sequence

<dnaseqindica>1..459#681..812#1551..1674#2837..3150#3323..3399#3501..3636#4137..4340#4415..4474#atggacgccgccgcgcccgcgccgcctgcctcgccgccgctcgccgtgcacctcgtcaccggcggcgggtcctcgccggagcacgcgctcctcctgcgctccctcgccgcggcgcgcgtcgtcgccctcgacgccgagtggaagccgcgccgccgcggccccgccgtcgccgatgacccttcggcggcggcggcggctactccgcccccgctgcagttccccacggtcacgctcctccaggtggcatgccgcggcgacggcgacgggggaggggctgcggctgccgaggtgttcgtcgtcgacctcctcgcggtgccgctggccgaattgcgggagccgctgcgggagctgttcgagaggcctgaggtgctgaagctggggttccggttcaagcaggacctagtgtacctctcggccaccttcgccgctgccctcggctccagtgccggattcgagagagtaagtggggatcgatcgaattgctgctgtggaacacgccttgaaccctttcttttacttcatgtaatttggactttgtgagggtaataattagtgaaaccaagtagtactagctggcacaggcttgaattaaactcactctgcctcaggttccccattgaacattgtttgattactctcgtggtaatgggactaaacttcgctgcatttgttttcgctaggtggagcctttcttggatgtcaccaacgcttattactacctgaaaggccatgacatgcaaaagaggcttccaagggagaccaagagtttggcaacaatttgtgaggaactgcttggtgtttatttatcaaaggttagtttggtggaccctaacagctttcatttgtgaatatttttgtttgctggacattccctgatgaccatgtgaatcaattcttttggaaatatttcaatttactagatagcatacatagacttgtataattctaagttagctagaattaggatacccagataaggataatggttagttttttgttcattgaaataagggctactaactgttcagttcactgcaatttcaattaaatttcccagtcgctcgcaatttatgcaagggccatcgaatcagcataccagtcgttccatggcatacagtcccatactcccattgcacttaccttgaaagttcctggtgaaattgaaactggatgataggacaggagaatatgggctttctggccccataaaggattcaataattactggaagacaactgatagagtttcaagtaggagcatattaatttaatgcatccttttatttttcaagtaaggtgtaatttgtgcaaaatataggagtaggtgcatttgttaacttagtcgcacattggcaagttagtgcgaaactctctctccagtcacaaatacttgttattttcaatacacttccgatcaagcttttaaagtttgtcctttgtttgcacctattcgatgttatggaaggcagcattagttatattatttgcttaaggaactgttttgttgaattgcaagtgatttaagattgttatcttaattttttctgctaggaacttcaatgtagtgattggtcataccgtcccttaagtgaaggtcaaatacaatatgctgcatctgatgcctactatttactcgacatatttgatctattccatcaaaaaatcagaactgaaggtacatctcatgcttaactcaactgtttaatcatgggattggaaatatcacatgcatgcatatttcccgtaaatttgaaactatttttcgcatttcatgcaaacatgattgatagacacaatctttcgttcccttcaattccctcttgaactagattatatgaccaatgtttagagggaatatgctttagtcattttttggtttcactgtcaacatagagccattcatgacacgagcaacgcattatcatggtgggttaaacattatatggaagatggacaaaaggtgggtgggttcaatggcgaggaacttaggtaaactataaggccatagactggagggagaatgtctttgaatttgctggtgctctgcagttctatgagctatatatccctttcaagttagcatgttgactcacagcacttacactgaagatatgagatggatgctaagaagctgctgcccttgtaaacaactgtcagatcaattaagatggctataacacggtcatctctcaagcctgtagtagagaaggtacatggagaatggagatgatgtcaccctgcacatgcacaaaagctcgtccagaactcacaagagggtataatgaagctgttcactgtgctggttgcacactcacattcactgctcagaaacttttgcctcacctctggtgcagagattcaggtagtcaacacagcaacactccacttacaggctttgttgcaagacatgtagctaagctgacttagtacagttgacaatcacaatagagctctagatgggaagtatgtgaaggacataggatgttgctgttgttctttttctctataaaatacatttctctccacggttttctttgtgctactttcccaatagtagcataagggtgaagagaggcatacaagtttgatagtgagagagagaatgtctcgactctacaaacattctgcatgcaatgcaacaaaggtttgaaatttgtgggcgacatgcatgtgcttgtgtgcatgttatttccagaagttagacattcttttctttaatgtttacttgtgggcaaatatttctcttttgagaacgtgggagctatgaaagtgtgaatgagttgattgctaataaatcatgcggttgtcttttctaaacttatcaacaaatattgcagggaagtgtttgcctacaaatgagctaacatcagatggccattgcccccaaagggacgcagaatgttcttcgtctgaagatgctgtttgctttgatgactattttacatccgttgtgatgaagtacgctgagaagattttgcttacagaatcagatacaaaaccacgttcatcaagacgaaaagaaaaacaaaaacttgcaaccaatgccaaatgcaaagagaagtttgagggcagtactgaatggcagggtcttcctccatgggatccttctgctggtggagatggctgcccaaaatttttgtgtgatgtgatggtaatagtttccctcgtccctttacattcaacagtgctttttatatttttatccaagtactgtttcatgagatgaacttgaaaaagaatatgattcactctatacaaaatagcttagttattttccctgtttgcaaatgctgcaaaggttgatatggagaaaatttggacagattgagggtttagctaagcacttgagatgtgttggaatagatgctgctactccatcctcaaggaagcctgaaccaaggtcttctctagaagttttgcaaaaaatgttataacattcttaatgtctctatgaattgtcatttttatgttttcgtttatgtgcttatctttatcatgtagggaactgttaaatcaaacctataaggaaagaagagtattacttacaagagatgtcaagctcttaaaatatcaatatttgacaagtaaccaggtatacagagtgaagagccttctcaaacatgatcaactggcagaggtatgcacatttttttttctgtcttcagttttattgatctgcaaaaacttaagttactgtaaatgctttatggcccaatcttattgattacacagcaaaaaatcagaagattgatttcagttctctttcttttgtgtgtgcgcgactgtctgtgtgtcaacaatcactcaaggccaagtgaacttaaatttctggcaggaactggtacaatgtcagccaaatcacagaagaaacttttctacattaccaagaaaaatgtgcaaccactttgacagttttgtctagactccagaacttctgtagttatatacatatggtgtattaatattttatttttttgaagtaaaatatagacataacattgactagaatcatactgtggatacaaaattttccagctgaaaccacagtatagtacgcgtacttatctccaacttccaaatgaggagattctgaaactcattgattggcttattaactactgaaaatacgtgtttcaggtgattgatactttccagttaaagatatccgaggataagcttatgtcgagatgtacaaagtgcaatggaagattcatccaaaaaccgctcacactcgatgaggctattgaagcttcaaaaggtttccagattatcccttcctgcctcttcaagcgaaacttggagttctggaagtgcactgactgcaaccagctctattgggaggtacttatccgttcctgtttcccaaactacccatattctctttcttgtatccaactaattttggacattcacagggtactcaataccacaatgcagttcagaagtttttgtcagtatgcaacattagcgactga</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0452400, RefSeq:Os07g0452400