Os07g0457300

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Revision as of 08:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0457300| Description = Protein of unknown function DUF1446 family protein| Version = NM_001066098.1 GI:115471928 GeneID:4343149| Length = 4...")
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Gene Name

Os07g0457300

Description

Protein of unknown function DUF1446 family protein

Version

NM_001066098.1 GI:115471928 GeneID:4343149

Length

4896 bp

Definition

Oryza sativa Japonica Group Os07g0457300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:16573030..16577925

Sequence Coding Region

16573409..16573441,16573546..16573747,16573982..16574056,16574143..16574235,16574333..16574373
,16574804..16574917,16575369..16575483,16575577..16575767,16575839..16575955
,16576251..16576331,16576466..16576701,16576956..16576995,16577130..16577705

Expression

GEO Profiles:Os07g0457300

Genome Context

<gbrowseImage1> name=NC_008400:16573030..16577925 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:16573030..16577925 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagaacttcatgactgtgtggtccagttgaggagcaatcctcagcggtgcagggacaccgtttatgttggctgtggtgctggatttgggggtgaccggcccatggctgctctcaagttgctggagagagtcaaggaacttaactaccttgtgctcgagtgtttggccgagcgaactctcgtggatcgctaccaaatcatgatgtcgggaggaaaaggatatgatccccgagttaaggagtggctgtctgtgcttctacccttagccttggatagaggagtttgcataataactaacatgggcgctgtggatccacttggagctcaagaagaagttctggagctggcatctaatttgggattggaaataacagtcgctgtagcttatgaaacatcttcaggaaattctgtattttctaatgaatcaactggggtgcgacagggcggaagcacatatcttggtgtggcctcaattgtacactgcctagaaaatggcaaaccacaagttgttattacttctcgggttgctgatgctgcgctgttcttagcacctatggtatatgaattaggttggaattggaatgactttgaggagttgtcacaagggacattggctagccatcttttggaatgtggatgccaactcactggagggtatttcatgcaccctggagatgcatatcgagatttttcttttgaacagcttctggatttgtctcttccatatgccgaagtcagttacaaaggagaagtgtttgttggaaaggcagagggcagcggaggtcttctaagctacagcacatgtgcagaacagcttctgtacgaagttggagatcctgcaaactatattactcctgatctggttgtagatttccgtgatgtgaagttccagcaaatatcaaaagacaaggtccagtgcaaaggagcaaaaccatccaatccttgctggcccgagaaactcctccaattgcttcctactgagagcggatggaaaggctggggagagatatcatacggtggccaagaatgtttgaagcgagctcatgcagcagaatacctcgttaggtcatggatggatgaaacatatcctggcattgaaggaaaaattatctcatacataataggatatgatagtttgaaagccattggagataacaaagacagttctgtcaaacaagtgatggatgtcaggttccggatggatgggctatttgagctggaagaacatgctatcaaatttgttgaagagttcattgcactttatacaaatgggccggctggtggtggcggcataagcactgggcagaagaaggaaataactctgcagaaaatactggttgatcgggagaagatcttttggcaagtaaatatgaagaaatcaagtattccttctccacagaatcaggctacgaatgctgacaagggtcaaatgtgtgatcaacaacaacacaagtgcccaagaaggtgtgcaatgggcactcttcccttgaacacaaacatggacacactgccatctgctgttccttctccatctggaacaaagattcctctataccacgtagctcacagcagggccggtgataaagggaatgatttgaatttctccatcattccgcatttccctgatgacattggtcggctgagggcagtgatcactcgagattgggtcaagaatgctgtttcaccccttcttgattcctccttgtttcccgctgatcgagcaaatcaggttcggtatgatccgctcgagaatgtaagtattgagatttatgatgtcccaggaatcagctccctgaacgttgtcgtgaggaatatcctcgatggcggtgtgaattcttcgagaaggattgatcggcacgggaaaactctatcagatctcatcttgtgccagaatgttgtcttgcctccgtga</cdnaseq>

Protein Sequence

<aaseq>MEELHDCVVQLRSNPQRCRDTVYVGCGAGFGGDRPMAALKLLER VKELNYLVLECLAERTLVDRYQIMMSGGKGYDPRVKEWLSVLLPLALDRGVCIITNMG AVDPLGAQEEVLELASNLGLEITVAVAYETSSGNSVFSNESTGVRQGGSTYLGVASIV HCLENGKPQVVITSRVADAALFLAPMVYELGWNWNDFEELSQGTLASHLLECGCQLTG GYFMHPGDAYRDFSFEQLLDLSLPYAEVSYKGEVFVGKAEGSGGLLSYSTCAEQLLYE VGDPANYITPDLVVDFRDVKFQQISKDKVQCKGAKPSNPCWPEKLLQLLPTESGWKGW GEISYGGQECLKRAHAAEYLVRSWMDETYPGIEGKIISYIIGYDSLKAIGDNKDSSVK QVMDVRFRMDGLFELEEHAIKFVEEFIALYTNGPAGGGGISTGQKKEITLQKILVDRE KIFWQVNMKKSSIPSPQNQATNADKGQMCDQQQHKCPRRCAMGTLPLNTNMDTLPSAV PSPSGTKIPLYHVAHSRAGDKGNDLNFSIIPHFPDDIGRLRAVITRDWVKNAVSPLLD SSLFPADRANQVRYDPLENVSIEIYDVPGISSLNVVVRNILDGGVNSSRRIDRHGKTL SDLILCQNVVLPP</aaseq>

Gene Sequence

<dnaseqindica>380..412#517..718#953..1027#1114..1206#1304..1344#1775..1888#2340..2454#2548..2738#2810..2926#3222..3302#3437..3672#3927..3966#4101..4676#gcacgtgcagcttttcccccctcctccagcgtcgtctcgcctccgcgcgctccccgccggcgacggccccgcccccttgcctcctctctcgcgagcacggccgccggcgagcaggtctggagcagcgacgcgcgcggccggcccccccatcgcggtcctcgaatcgaatcggaggtatatatccactcctctctcgtattcctactccccactccacgccacttcatgtctcggcgtggcatagatttgagaattccatcctttacatggactgatttctcatccagcttcttccggatttttctctgattaagagcaatctgttagttccgctcctggttcactgaggaataatttgccgtgggatgcatcagtaacaatggaagaacttcatgactgtgtggtccagttggttagtgcttgctatataatttgaaaaaaaatctgttaaatgttaattatgcgagttagtgaaatggatggttcagttcggctgatactgctattggttgatagaggagcaatcctcagcggtgcagggacaccgtttatgttggctgtggtgctggatttgggggtgaccggcccatggctgctctcaagttgctggagagagtcaaggaacttaactaccttgtgctcgagtgtttggccgagcgaactctcgtggatcgctaccaaatcatgatgtcgggaggaaaaggatatgatccccgaggtatacacttttcaattctaaaagtatgcagtatctgttttctctgtttttgagattgtggagagtactttgccccaaatcatagagaagcttatgtgatttttgtactgtatagcttatttgtgtatttttctctggaggagaagactagaaatttattttactgtgttgtgtttagtattttagataagatttcttttttagtgcaccttttcttaatatggtcacatgcagttaaggagtggctgtctgtgcttctacccttagccttggatagaggagtttgcataataactaacatgggcgctggtaagacattgcaaactatagtttggtattgcctaatttgttcttttgcttgtttagataatgtatgtgcctttggaatttatcagtggatccacttggagctcaagaagaagttctggagctggcatctaatttgggattggaaataacagtcgctgtagcttatgaaacatcttcaggtacttttggtttcttcttgtgctagtaaggcctagcatgggttacatgattcagtcgttcaagctggattcaagcttagtttggctcttttttcaggaaattctgtattttctaatgaatcaactggggtgcgacaggtaatctattttgatttctctgacacgttttgacatcatgttagtccatttccttctaacaaccttaatgctttttaaacatacgacaattacccacaattgatcagtattcagtagcatccaaaattttgaagttacattatgcgagttacctatttttaatgtacgtgccatgtggttcagccatagaaaactttggtcacatgaggtggacttttgattattactgggagatgtagataaacttaatcaaatagaaatttactcatcaggagatgctatgccctagttttgattattaacatatatttctcttgccttattttgatacaggtgttgttttaaccatttttcactcaaatgtgcttatgttcaaccaaaatttcctattttggttatctatttgatggtagttttgttgtatgtgaagggcggaagcacatatcttggtgtggcctcaattgtacactgcctagaaaatggcaaaccacaagttgttattacttctcgggttgctgatgctgcgctgttcttagcacctatggtatgctttgaatagcttgttcagttgttcttatgttcgcaaacaatataatgactattttaactctctttgtgccaatgtaaatgttaaagtggatattgcttcaggaacagggtgttctgaattgttttgcaacatgcatgtaaaagaaaatatgtgattaggaaatctcgaaagctcagttattagcatgtctatcctgcggataaatacacaaagatttgacatatgttttatggtaactggctcaaattaaacatgatgcataagtttggagattcttctggtttccttgatatataaaagctgaccctgtcattttgtcagctactcagctttttgttatgctcattttctttagattatgcaaagtagtaatgcaattaaggctgattttctccaataccatatttgtttagttaatcctttcctctctccctttcaacataaggtatatgaattaggttggaattggaatgactttgaggagttgtcacaagggacattggctagccatcttttggaatgtggatgccaactcactggagggtatttcatgcaccctggtacagttcttctttcaaaatcactaggatgatgatttttcactacagttatgattcatgttcattttatgctctacttgtggtaaagagcaggagatgcatatcgagatttttcttttgaacagcttctggatttgtctcttccatatgccgaagtcagttacaaaggagaagtgtttgttggaaaggcagagggcagcggaggtcttctaagctacagcacatgtgcagaacagcttctgtacgaagttggagatcctgcaaactatattactcctgatctggtgagaccaaatgccggtttcagttctaggtagcttcttttctgaacagttataatattttcttggatcaggttgtagatttccgtgatgtgaagttccagcaaatatcaaaagacaaggtccagtgcaaaggagcaaaaccatccaatccttgctggcccgagaaactcctccaattgcttcctactgtatgttttactttaattgtcagttatttgaattttttcatttaactttttgttcaacttagcatctgaacacatagtattgacatgtgacataatatttaaactccataaatgcactgccttgaggtttgcgtagtatttgaattagttgtcgtatagctgaaatttgattatggtctttttatatttgaagtaaacaatagtgtttccgaaatggcttggataaatagtactttttaacatcagctacagatagtttgtcaagtgggtcacttaatccacatattttatataggagagcggatggaaaggctggggagagatatcatacggtggccaagaatgtttgaagcgagctcatgcagcagaatacctcgtaagtccatgaaagtacttcccatattttcttcaaataacccctgatgtgttaagaattgaaatatatgttttacactacaagtgataacacaaaggcagtttaaccacttgcatcttttcttctggaattaggttaggtcatggatggatgaaacatatcctggcattgaaggaaaaattatctcatacataataggatatgatagtttgaaagccattggagataacaaagacagttctgtcaaacaagtgatggatgtcaggttccggatggatgggctatttgagctggaagaacatgctatcaaatttgttgaagagttcattgcactttatacaaatgggccggctggtggtggcggcataaggtatttacaagtattctttgcttttatcaacaatgctcagatctagatgctgccttgtagttgagaatagcataagttcatgcacagaattatgcaccgctcagatggatgagctataccgctatactaaagctaatcatgtgagagctcatgaaaactactgtatttgcacttttaatggagaaggtgtctgcaattttctcttgtttctgaacttgcaaaaccatctgacatgtttgtttcatgatttacagcactgggcagaagaaggaaataactctgcagaaaatactggtatggataatcactgtacttcattccaggagagattacaaatgttcatatttttgggttctaccagagaaaacatttagagattataacacatagatttctacggatgacactgagatttgtattttgtacaggttgatcgggagaagatcttttggcaagtaaatatgaagaaatcaagtattccttctccacagaatcaggctacgaatgctgacaagggtcaaatgtgtgatcaacaacaacacaagtgcccaagaaggtgtgcaatgggcactcttcccttgaacacaaacatggacacactgccatctgctgttccttctccatctggaacaaagattcctctataccacgtagctcacagcagggccggtgataaagggaatgatttgaatttctccatcattccgcatttccctgatgacattggtcggctgagggcagtgatcactcgagattgggtcaagaatgctgtttcaccccttcttgattcctccttgtttcccgctgatcgagcaaatcaggttcggtatgatccgctcgagaatgtaagtattgagatttatgatgtcccaggaatcagctccctgaacgttgtcgtgaggaatatcctcgatggcggtgtgaattcttcgagaaggattgatcggcacgggaaaactctatcagatctcatcttgtgccagaatgttgtcttgcctccgtgatcgcagatatctatctggttctgtagcttccgaccggggcttttagaagcttgaaaatttggcatgcaaatagccagaggtgaaccgatccctttaccttcatgaagctgcattcgcttattgtatgtaccatgagaaaaataccaagaaccgtcaagtatgtgcatttccaagacataccttggttgctatattagttgatgagattttaatgagttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0457300, RefSeq:Os07g0457300