Os07g0458900

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Revision as of 08:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os07g0458900| Description = Conserved hypothetical protein| Version = NM_001188256.1 GI:297725642 GeneID:9266890| Length = 3523 bp| Definition ...")
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Gene Name

Os07g0458900

Description

Conserved hypothetical protein

Version

NM_001188256.1 GI:297725642 GeneID:9266890

Length

3523 bp

Definition

Oryza sativa Japonica Group Os07g0458900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:16664072..16667594

Sequence Coding Region

16664072..16664094,16665332..16665555,16665725..16666263,16666686..16666934,16667007..16667594

Expression

GEO Profiles:Os07g0458900

Genome Context

<gbrowseImage1> name=NC_008400:16664072..16667594 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:16664072..16667594 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacagagatggcttcgacaacctcagcgcgtgggcttcgcagccgtcggcgagcggccctaccactgcttcctctgtcggcgccggcttcgacctcaactcgcaagcgccggcggcggaggggttcccggggcttgggatgtacggagccttcctccagggcgacgacgacgagctcctcactggccgcggtaggggctccagcctccctccctatcgcccaccgcgtgccggagtcggagacggaagggcgactccaaatctgactcggcaactgaactttggcaactcctcctcggcaggagctggtcgcggaggaggaaatggtggagctttcccaggcgggttgtcttcggggagaggcgtttggcagcactcgagttcggccgccacggcacttggccgccggagccagcacagcaacacggcggtacgtgccggtggcagcggccagcgcctaccgcgtccccgggcaccgaggagtgccgtccgtgggcaagcatccagctccgacgctcccttcaacaatgaagatgaagaattggaggatgacgtggaggagtttgcgagctccggcggacccccgcgtagagtaggaacgtataatggtgcacaaatgagtggtgaaggataccaagccatcgtcgacggcttacttgatagaagggggtatagaagggggttggtgtatacccgttgccaggtgaagaaccaaatactcgtactgaaaaccacccactctttctggcgatacttgcaagcgcacacagggttggggaggttaccagatggaaccattgatgctgagtctttgttctggaaaacacatacagagaggctgcaatggggtcctccagaaaacgaggagttgcttgatcaactattcagagggtacactgtggatggaagcacaacccttgtgcctggagatgattatggtcaggaccaggggcaagaggaagaggaagaggacgaggagtttcaaccaacacctagtagtacaagcagccagaggagcaagagccaaaagggcaagaggccattaagtagcactacaagcactttgtccagtccaatgaagaagagcaagagcccaatggtgaagattgtgaaagacatagccagtaccttcaaagaagctgtcatagtcaacactaagcaaatgcagaaacgtgcaagtgacaaggctgcattttcagtcaagaggtgtcaggagctggcatttgagtgtggcgtagagcaaaccattgaatctgtctatgctatgtccaagatgttcgaaacagagtatcaaagagagttcttctgtggccaattaactcctgagcttaggttgggttacttcaagaaatggtgcagggacaacaatttggatgttgacaattttttacatgtgttgaagcaggaagaagatcatggccctatggttgaggaagcaaaagatgatggaggcagcacaagtgaggatgagattatatcgatgtgccgcaacaatctggtgcatgcagagaattcgatcgtgcaattggttcctatcttgggtatgtactctgataactattttgtgaaactacctaagagggtcaatggagattttgccctttcatccaaacacctctag</cdnaseq>

Protein Sequence

<aaseq>MDRDGFDNLSAWASQPSASGPTTASSVGAGFDLNSQAPAAEGFP GLGMYGAFLQGDDDELLTGRGRGSSLPPYRPPRAGVGDGRATPNLTRQLNFGNSSSAG AGRGGGNGGAFPGGLSSGRGVWQHSSSAATALGRRSQHSNTAVRAGGSGQRLPRPRAP RSAVRGQASSSDAPFNNEDEELEDDVEEFASSGGPPRRVGTYNGAQMSGEGYQAIVDG LLDRRGYRRGLVYTRCQVKNQILVLKTTHSFWRYLQAHTGLGRLPDGTIDAESLFWKT HTERLQWGPPENEELLDQLFRGYTVDGSTTLVPGDDYGQDQGQEEEEEDEEFQPTPSS TSSQRSKSQKGKRPLSSTTSTLSSPMKKSKSPMVKIVKDIASTFKEAVIVNTKQMQKR ASDKAAFSVKRCQELAFECGVEQTIESVYAMSKMFETEYQREFFCGQLTPELRLGYFK KWCRDNNLDVDNFLHVLKQEEDHGPMVEEAKDDGGSTSEDEIISMCRNNLVHAENSIV QLVPILGMYSDNYFVKLPKRVNGDFALSSKHL</aaseq>

Gene Sequence

<dnaseqindica>3501..3523#2040..2263#1332..1870#661..909#1..588#atggacagagatggcttcgacaacctcagcgcgtgggcttcgcagccgtcggcgagcggccctaccactgcttcctctgtcggcgccggcttcgacctcaactcgcaagcgccggcggcggaggggttcccggggcttgggatgtacggagccttcctccagggcgacgacgacgagctcctcactggccgcggtaggggctccagcctccctccctatcgcccaccgcgtgccggagtcggagacggaagggcgactccaaatctgactcggcaactgaactttggcaactcctcctcggcaggagctggtcgcggaggaggaaatggtggagctttcccaggcgggttgtcttcggggagaggcgtttggcagcactcgagttcggccgccacggcacttggccgccggagccagcacagcaacacggcggtacgtgccggtggcagcggccagcgcctaccgcgtccccgggcaccgaggagtgccgtccgtgggcaagcatccagctccgacgctcccttcaacaatgaagatgaagaattggaggatgacgtggaggagtttgcgagctccggcggacccccggtgagccaagctagtcgagcctaatggaatgaagttaataatgcttgcttgttagaattgtgcattgagcagcgtagagtaggaacgtataatggtgcacaaatgagtggtgaaggataccaagccatcgtcgacggcttacttgatagaagggggtatagaagggggttggtgtatacccgttgccaggtgaagaaccaaatactcgtactgaaaaccacccactctttctggcgatacttgcaagcgcacacagggttggggaggttaccagatggaaccattgatgctgagtctttgttctggaaaacacatacagaggtataagcagccaatctgtgtattctatttttcagtttcctagttacaaattgtttcaaattgtgtacagtgcttgcccaatttcagtgttgctagctccagtgggcgaaaaattgtccaatgaactgatctctcataggactgacttactgttgtagttactaactttctgctattaagtaggcaaaaatttgacgaggaaccttattataaaaacatttgcttagtaaacacaacacgaattgtgatagttatttgtgtgatagtacagtgcgctgtataaactatactcttcctttatgatagtacagtactctgtaatttaggttatatgagcatgtaattcagttatctgtgcactagtatagtacatatgtgctcatccattttatttatcgctgcagaagaaaccataactaaagaggctgcaatggggtcctccagaaaacgaggagttgcttgatcaactattcagagggtacactgtggatggaagcacaacccttgtgcctggagatgattatggtcaggaccaggggcaagaggaagaggaagaggacgaggagtttcaaccaacacctagtagtacaagcagccagaggagcaagagccaaaagggcaagaggccattaagtagcactacaagcactttgtccagtccaatgaagaagagcaagagcccaatggtgaagattgtgaaagacatagccagtaccttcaaagaagctgtcatagtcaacactaagcaaatgcagaaacgtgcaagtgacaaggctgcattttcagtcaagaggtgtcaggagctggcatttgagtgtggcgtagagcaaaccattgaatctgtctatgctatgtccaagatgttcgaaacagagtatcaaagagagttcttctgtggccaattaactcctgagcttaggttgggttacttcaagaaatggtgcagggacaacaatttggagtagttgatgtcttgctttcatatgtctgttgaactatttatttgtgtgttgaacctatcatctgtgtgtcagttgttgaactatttatctgtgtgttgagactattatctgtgtattgaaactattatcggtgtgtgttgaacctattatctgtatattattttcgagtgttgacaattttttacatgtgttgaagcaggaagaagatcatggccctatggttgaggaagcaaaagatgatggaggcagcacaagtgaggatgagattatatcgatgtgccgcaacaatctggtgcatgcagagaattcgatcgtgcaattggttcctatcttgggtatgtactctgataactattttgtgaaactacctaagagggtcaatggagattttggtatggattgggtcatggatacactagcccgagatacccaatgctacaacatgtttagggtagagagacctttatttaacaggctacataatactttggtccagtcatatgggttgaagtccactacaaaaatgacatctatagaggctcttgctatgtttttatggattgttggttcaccacagtcagttagacaggctgagaaccgtttaaggaggtctttggagacaataagcaggacatttaatagagttttgacatgcctccttaggttagctcatgacataattgtacccaaggacccaactttttcagaggtgcacccaaacttggaaaatccagcattttggccacacttcaacgactgcataggagctatagatgggacacatgtgaatgttgtggtgcctaagagtaagagggttccgtacttgaacaggcataatgaaaccagtcagaatgtgcttgttgtttgtgatttcgacatgagatttacctttgtattgttgggatggcctggttcggcacatgacatgagagttttcaaaggtttgctacttgaactatcttgcaacaatctttaattgcacttgttcatctaagtctcattgtgtgcctcactttcacaatatgttgggaagtattatgtggttgatgcggggtacccaaaccggccgggctacctttcaccatacacacgtacaaggtaccatgtcgcgcaatggaacgatggaccgccgccacaaggtatgaaagaaaccttcaaccatgcacatgccaaagttaggaatgtcatagagcgatcttttggagtgttgaagatgaaatttaggatcttgttgaacatgccaagttttccagaagcaaagcaaactagaattattgttgcttgtatggctcttcataatttcattcgagagagcagaattgcggatagggaatttgatgcctgtgatgaggataaaaattataacccaatgctcaagctttattttatggagtgtaattttttcttgtctagcttaatttgtatggactaaactacctatcgtgtatgttgagtgtgatatctcatttgtacagacaaataaaatttatcgtgtttcggatgcttggtttgaaatatgatttgtttgtgtcatttgtgagagggaggaggccacacatgagtctgccacatcaaatccggttggaaaggagccaaatgattggaaaagtatatttattgtcaatctagccctttcatccaaacacctctag</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0458900, RefSeq:Os07g0458900